ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACKA_BORBU (O51567) Acetate kinase (EC 2.7.2.1) (Acetokinase) 31 0.70
2ACKA_BORGA (Q660Q0) Acetate kinase (EC 2.7.2.1) (Acetokinase) 29 3.5
3Y396_HELPY (O25157) Hypothetical protein HP0396 28 4.5
4ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC 3.4.2... 28 5.9
5C71BW_ARATH (Q9LIP5) Cytochrome P450 71B35 (EC 1.14.-.-) 28 7.7

>ACKA_BORBU (O51567) Acetate kinase (EC 2.7.2.1) (Acetokinase)|
          Length = 405

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 7   FTLVIPYTW*KNYPYYEHSWAILPIRQNWGGHGISYSCLLKDKKQIRKSKV 159
           F   IPY+W KN+             + +G HG+SYS + K   +I   K+
Sbjct: 161 FLYAIPYSWYKNHNI-----------RKYGFHGLSYSYITKRSSEILNKKI 200



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>ACKA_BORGA (Q660Q0) Acetate kinase (EC 2.7.2.1) (Acetokinase)|
          Length = 405

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 7   FTLVIPYTW*KNYPYYEHSWAILPIRQNWGGHGISYSCLLKDKKQIRKSKV 159
           F    PY+W     Y EH+     IR+ +G HG+SYS + K   +I   K+
Sbjct: 161 FLYATPYSW-----YKEHN-----IRK-YGFHGLSYSYVTKRSSEILNKKI 200



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>Y396_HELPY (O25157) Hypothetical protein HP0396|
          Length = 616

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 162 APLPFGLYELKLDVQWGSSVRSHGFSRGYRHTKVPMLA 275
           APLP+G+YEL L          +GF RG +   +P L+
Sbjct: 228 APLPYGIYELML----------YGFMRGKKARVMPCLS 255



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>ULP2_YEAST (P40537) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)|
          Length = 1034

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +1

Query: 79  IRQNWGGHGISYSCLLKDKKQIRKSKVKLHSPLASTS*NWMF 204
           +  N  G G++  C  +D + ++ S +K HS L STS   +F
Sbjct: 78  VDNNDEGEGVNSGCSDQDFEPLQSSPLKRHSSLKSTSNGLLF 119



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>C71BW_ARATH (Q9LIP5) Cytochrome P450 71B35 (EC 1.14.-.-)|
          Length = 500

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
 Frame = -3

Query: 167 WSFTFDFLICFL----------SFRRQE*LIPCPPQFCLIGNMAQL 60
           W     FL+C L           +R+     PCPP F +IGN+ Q+
Sbjct: 5   WLLPLIFLVCILLAVFNHKKHPKYRQ----FPCPPGFPIIGNLHQI 46


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,103,926
Number of Sequences: 219361
Number of extensions: 940969
Number of successful extensions: 2152
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2151
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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