ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31o24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC ... 114 4e-25
2YAE9_YEAST (P39721) Protein YAL049C 76 1e-13
3YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II 58 3e-08
4DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.... 40 0.009
5DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precur... 32 1.4
6POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p... 32 2.4
7DLHH_SULSO (P95862) Putative carboxymethylenebutenolidase (EC 3.... 31 3.1
8EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts) 31 3.1
9MURA1_STRMU (Q8DT57) UDP-N-acetylglucosamine 1-carboxyvinyltrans... 31 4.1
10KSR1_HUMAN (Q8IVT5) Kinase suppressor of ras-1 (Kinase suppresso... 30 7.0
11MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscl... 30 9.1

>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)|
          Length = 303

 Score =  114 bits (284), Expect = 4e-25
 Identities = 59/119 (49%), Positives = 81/119 (68%)
 Frame = -2

Query: 689 VVVPDFLHGDPYVPENADRPIQVWLKEHAPGKAFEEAKPVIAALKEQGVSTVGAAGYCWG 510
           VVVPDFL GD Y+ +  +     WL+ H+P KA E+AKP+ AALK++G S V   GYCWG
Sbjct: 99  VVVPDFLKGD-YLDDKKN--FTEWLEAHSPVKAAEDAKPLFAALKKEGKS-VAVGGYCWG 154

Query: 509 AKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVL 333
            K+  E+ K +++ A  +SHP  VT +D+KEVK PI +LGA+ D T+PP+ V +F  VL
Sbjct: 155 GKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213



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>YAE9_YEAST (P39721) Protein YAL049C|
          Length = 246

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
 Frame = -2

Query: 689 VVVPDFLHGDPYVPENADRPIQ--VWLKEHAPGKAFEEAKPVIAALK-EQGVSTVGAAGY 519
           V VPD L GD     ++D+PI    W + H+P    +     +  LK E     +G  GY
Sbjct: 73  VFVPDILFGDAI---SSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGY 129

Query: 518 CWGAKVVAELAKANE--IHAAVMSHPSFVTVEDIKEV--KCPIAVLGAEIDKTSPPELVK 351
           C+GAK   +    +    +AA ++HPSFV++E+I+ +  K PI +  AE D   P  L  
Sbjct: 130 CFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFPANLRH 189

Query: 350 QFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDWFS 192
             E+ L  N    + + +F GV+HG+  R          + E+ L   I WF+
Sbjct: 190 LTEEKLKDNHA-TYQLDLFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYWFN 241



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>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II|
          Length = 249

 Score = 57.8 bits (138), Expect = 3e-08
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
 Frame = -2

Query: 689 VVVPDFLHGDPY--------VPENADRPIQVWLKEHAPGKAFEEAKPVIAALK-EQGVS- 540
           V +PDFL G P          PE+       +    +P   + +   V+ A++   G + 
Sbjct: 72  VYLPDFLEGKPLPVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKVVEAVRANHGPNV 131

Query: 539 TVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPE 360
           T+G  G+CWGAKV+       +       HPSF    D   V CP+  L     K    +
Sbjct: 132 TIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCPVLFL---CSKDEDAK 188

Query: 359 LVKQFEQVLSSNSGIA-HFVKIFPGVSHGW 273
           ++K++E+   +N   A    + F  + HGW
Sbjct: 189 IIKEWEEAFKTNPAYAKSSFETFSDMFHGW 218



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>DLHH_YERPE (Q8ZAL4) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 267

 Score = 39.7 bits (91), Expect = 0.009
 Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
 Frame = -2

Query: 524 GYCWGAKVVAELAKAN-EIHAAVMSHPSFVTVEDIKEVKCPIAV----------LGAEID 378
           G+CWG ++    A  N ++ AAV  +   V  + +   K P+ V          L    D
Sbjct: 135 GFCWGGRIAWLYAAHNPQLKAAVAWYGKLVGEKTLFLPKYPVDVAIDLCAPVLGLYGGKD 194

Query: 377 KTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSHMIDW 198
            + P E ++   Q L + +  A  + ++P   H +   Y+   +   +SA++    M+DW
Sbjct: 195 TSIPAEHIETMRQALRAANADAEII-VYPEAGHAFNADYRP--SYHAESAQDGWQRMLDW 251

Query: 197 FSKN 186
           F+++
Sbjct: 252 FTQH 255



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>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC|
           3.1.1.45) (Dienelactone hydrolase) (DLH)
          Length = 291

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
 Frame = -2

Query: 536 VGAAGYCWGAKVVAELAKAN-EIHAAVMSHPSFV----------TVEDIKEVKCPIAVLG 390
           +G  G+CWG ++    A  N  + A V  +   V           V+   ++K P+  L 
Sbjct: 164 LGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLY 223

Query: 389 AEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAEEALSH 210
              D+  P   + + ++   +      FV ++P   H +   Y+   +   + A++    
Sbjct: 224 GGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAGHAFHADYR--PSYRAEPAQDGWKR 280

Query: 209 MIDWF 195
           + DWF
Sbjct: 281 LQDWF 285



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>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid|
            protein C) (p21); Core protein p19; Envelope glycoprotein
            E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68)
            (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine
            protease/N
          Length = 3018

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
 Frame = -2

Query: 683  VPDFLHGDPYVPENADRPIQVWLKE---HAPGKAFEEAKPVIAALKEQGVS-TVGAAGYC 516
            V DF +      +    P QV L E      G       PV   L    V+ TVG   Y 
Sbjct: 2100 VGDFHYVTGTTDDGLKCPCQVPLPEFFTELDGVRLHRYAPVCRPLLRDDVTFTVGLNSYV 2159

Query: 515  WGAKVVAELAKANEIHAAVMSHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQV 336
             G+++  E      +  +++  PS +TVE  K            +D+ SPP L       
Sbjct: 2160 IGSQLPCEPEPDVAVVTSMLQDPSHITVETAKR----------RLDRGSPPSLASSSASQ 2209

Query: 335  LSSNS 321
            LS+ S
Sbjct: 2210 LSAPS 2214



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>DLHH_SULSO (P95862) Putative carboxymethylenebutenolidase (EC 3.1.1.45)|
           (Dienelactone hydrolase) (DLH)
          Length = 257

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
 Frame = -2

Query: 560 LKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSH-PSFVTVEDIKEVKCPIAVLGAE 384
           +  QGV  + + G+C G  +  +LA    +   ++ +  +   +E I+++K PI  L A 
Sbjct: 134 VSSQGVKKIVSMGFCMGGGLAFQLATEVPLDGTIVFYGRNPQPLEAIQKIKGPILGLYAG 193

Query: 383 IDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHG-WTVRYKSEDAGAVKSAEEALSHM 207
            D      L      ++     +   +KI+PG  H  +  R +S +  A + A E +   
Sbjct: 194 EDPPIDAGLPDLISAIIKYKKDLE--LKIYPGAYHAFFNDRGRSYNKEAAEDAWERVKSF 251

Query: 206 IDWFSK 189
           +   SK
Sbjct: 252 LRRVSK 257



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>EFTS_DESVH (Q72DQ6) Elongation factor Ts (EF-Ts)|
          Length = 287

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 380 DKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHGWTVRYKSEDAGAVKSAE 225
           DKT+  EL+KQ  + +  N G+A FV+   G           EDA A ++AE
Sbjct: 247 DKTTVAELLKQTSKAVGDNLGVARFVRFQLG-----------EDAAAEEAAE 287



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>MURA1_STRMU (Q8DT57) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC|
           2.5.1.7) (Enoylpyruvate transferase 1)
           (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT
           1)
          Length = 423

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 590 FEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSHPSFVT 435
           +E  +P+I+ L+E GV          G +V++++ K   +    M HP F T
Sbjct: 260 WEHNRPLISKLREMGVQVTEEER---GIRVISDVTKLRPVTVKTMPHPGFPT 308



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>KSR1_HUMAN (Q8IVT5) Kinase suppressor of ras-1 (Kinase suppressor of ras)|
          Length = 921

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -2

Query: 557 KEQGVSTVGAAGYCWGAKVVAELAKANEIHAAVMSH 450
           ++Q +  V +AG+CW   ++AE  K N  + +  +H
Sbjct: 495 RQQFIFPVPSAGHCWKCLLIAESLKENAFNISAFAH 530



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>MLR_LUMTE (P80164) Myosin regulatory light chain, striated muscle, 25 kDa|
           isoform (LC25)
          Length = 195

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
 Frame = -2

Query: 614 KEHAPGKAFEEAKPVIAALKEQGVSTVGAAGYCWGAKVVAELAKANEIH----AAVM--- 456
           K+ AP    EEA    AA  E+   T  AA       V A L K N+I     A  M   
Sbjct: 14  KDDAPA---EEAPAAAAAPAEEAAPTPSAAPIHKVGNVFA-LFKQNQIQEFKEAFTMIDQ 69

Query: 455 SHPSFVTVEDIKEVKCPIAVLGAEIDKTSPPELVKQFEQVLSSNSGIAHFVKIFPGVSHG 276
                +  +D+  +      +G E+D    P++VK+     +      HF+ +F    HG
Sbjct: 70  DRDGIIGPDDLGNI---FQQIGREVD----PKVVKEMLAESAEKLNFTHFLTLFGEKLHG 122

Query: 275 WTVRYKSEDAGAVKSAEEALSHMIDWFSKNL 183
                   DA A+   E+ L ++++ + K+L
Sbjct: 123 TDTEGTLRDAFALFD-EDKLGYLLEEYVKDL 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,358,987
Number of Sequences: 219361
Number of extensions: 1883967
Number of successful extensions: 5111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5106
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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