| Clone Name | rbaal31o16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY626156.3| Zea mays putative phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1806 Score = 313 bits (158), Expect = 3e-82 Identities = 335/394 (85%) Strand = Plus / Minus Query: 184 atcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagtt 243 |||||||||| ||||||||| |||||||||||||||||| ||||||||| | || | Sbjct: 1641 atcacttggtggcaatgaacaacccccacctctgctcaccgccagagctccgtttcagct 1582 Query: 244 tcgcgttccacccagtcacaatatcgtcatagtcctcctgaccaaagtcggctagaaaat 303 |||||||||| || ||||||| ||||||||||||||||| ||||| || || ||| Sbjct: 1581 tcgcgttccagccgttcacaatgtcgtcatagtcctcctgggtgaagtctgccaggaaag 1522 Query: 304 catctttgttcttttcaacttcggctagctccctctgtaaaactttcaggaactgatcac 363 | |||||||||||||||||||| ||| ||||||||||| ||| |||| |||||| ||| Sbjct: 1521 cgtctttgttcttttcaacttcacctatctccctctgtagaacattcaagaactgctcag 1462 Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctgtccataagtct 423 |||| ||||| || ||||||| ||| |||||||||| || |||||||||||||||| || Sbjct: 1461 tgcgatcttccgcgatgacattatgaaaaccagcatccttcagcatctgtccataagcct 1402 Query: 424 ctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggtt 483 | || ||||| || || |||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 1401 ccacgtcatggagatcataacccctctgcttaatgtatgttgcaaactcttctgatggtt 1342 Query: 484 ttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagccatttga 543 |||| |||||| | |||||||| |||||||| ||||| || |||||||| |||||||||| Sbjct: 1341 ttccaggactcttgcagtaatcactgattagaacctttcccccaggtttcagccatttga 1282 Query: 544 agaaacttctaaacaaagcgggtttatcttgtat 577 |||||||| ||||||| | ||||||||||||||| Sbjct: 1281 agaaacttttaaacaaggagggtttatcttgtat 1248
>gb|AY103779.1| Zea mays PCO126548 mRNA sequence Length = 2333 Score = 260 bits (131), Expect = 5e-66 Identities = 329/395 (83%) Strand = Plus / Minus Query: 184 atcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagtt 243 |||||||||| ||||||||| ||||||||||||||| || |||||||||| | || | Sbjct: 1907 atcacttggtggcaatgaacaacccccacctctgctcgccggcagagctccgtttcagct 1848 Query: 244 tcgcgttccacccagtcacaatatcgtcatagtcctcctgaccaaagtcggctagaaaat 303 |||||||||| ||| ||||||| ||||||||||||||||| ||||| || || ||| Sbjct: 1847 tcgcgttccagccattcacaatgtcgtcatagtcctcctgggtgaagtctgccaggaaag 1788 Query: 304 catctttgttcttttcaacttcggctagctccctctgtaaaactttcaggaactgatcac 363 | |||||||||||||||||||| ||| ||||||||||| ||| |||| |||||| ||| Sbjct: 1787 cgtctttgttcttttcaacttcacctatctccctctgtagaacattcaagaactgctcag 1728 Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctgtccataagtct 423 |||| ||||| || ||||||| ||| |||||||||| || |||||||||||||||| || Sbjct: 1727 tgcgatcttccgcgatgacattatgaaaaccagcatccttcagcatctgtccataagcct 1668 Query: 424 ctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggtt 483 || || |||||||| || || |||||||||||||| | ||||| ||||| ||||||| Sbjct: 1667 tcacgtcgtgaaggtcatagcctctctgcttaatgtacgcagcaaattcttctgatggtt 1608 Query: 484 ttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagccatttga 543 |||| ||| || ||||||| |||||||||||||| || || || || ||||||||||||| Sbjct: 1607 ttccaggattcttacagtagtcgctgattaggactttgccgccgggctttagccatttga 1548 Query: 544 agaaacttctaaacaaagcgggtttatcttgtatg 578 |||| ||||| |||| ||| || || ||||||||| Sbjct: 1547 agaagcttctgaacagagcaggcttgtcttgtatg 1513
>ref|NM_192178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1500 Score = 258 bits (130), Expect = 2e-65 Identities = 328/394 (83%) Strand = Plus / Minus Query: 185 tcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagttt 244 |||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1500 tcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagttt 1441 Query: 245 cgcgttccacccagtcacaatatcgtcatagtcctcctgaccaaagtcggctagaaaatc 304 || ||||| ||| ||||||| |||| ||||||||||| | || || | | || || Sbjct: 1440 tgccttccatccattcacaatggcgtcgtagtcctcctggctgaaatcagagacgaactc 1381 Query: 305 atctttgttcttttcaacttcggctagctccctctgtaaaactttcaggaactgatcact 364 | ||||||||||||||||| || |||||||||| || ||| | ||||||||||| | Sbjct: 1380 gtttttgttcttttcaactttagcaagctccctctctagaacatcgaggaactgatcggt 1321 Query: 365 gcggtcttcggcaatgacatcatggaaaccagcattctctagcatctgtccataagtctc 424 ||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 1320 gcggtcttcagcaatgacatcatggaaaccagcattctcaagcatctgtccgtaagccct 1261 Query: 425 tacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttt 484 || || |||||||| |||||||| ||||||||||| | || |||||||| || ||||| Sbjct: 1260 gacgtcgtgaaggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggttt 1201 Query: 485 tcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaa 544 || || | | | |||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct: 1200 cccagggcacttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaa 1141 Query: 545 gaaacttctaaacaaagcgggtttatcttgtatg 578 ||||||| |||| | | |||||||||||||||| Sbjct: 1140 gaaacttttaaatagtgagggtttatcttgtatg 1107
>dbj|AK069137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008P07, full insert sequence Length = 2069 Score = 254 bits (128), Expect = 3e-64 Identities = 329/396 (83%) Strand = Plus / Minus Query: 183 catcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagt 242 |||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1785 catcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagt 1726 Query: 243 ttcgcgttccacccagtcacaatatcgtcatagtcctcctgaccaaagtcggctagaaaa 302 || || ||||| ||| ||||||| |||| ||||||||||| | || || | | || Sbjct: 1725 tttgccttccatccattcacaatggcgtcgtagtcctcctggctgaaatcagagacgaac 1666 Query: 303 tcatctttgttcttttcaacttcggctagctccctctgtaaaactttcaggaactgatca 362 || | ||||||||||||||||| || |||||||||| || ||| | ||||||||||| Sbjct: 1665 tcgtttttgttcttttcaactttagcaagctccctctctagaacatcgaggaactgatcg 1606 Query: 363 ctgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctgtccataagtc 422 |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| | Sbjct: 1605 gtgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatctgtccgtaagcc 1546 Query: 423 tctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggt 482 || || |||| ||| |||||||| ||||||||||| | || |||||||| || ||| Sbjct: 1545 ctgacgtcgtgaaagtcataacccctttgcttaatgtaagctgcgaactcttctgaaggt 1486 Query: 483 tttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagccatttg 542 || || || | | | |||||||| || |||||||||||||| |||||||| ||||| ||| Sbjct: 1485 ttcccagggcacttgcagtaatcactaattaggaccttacccccaggtttgagccacttg 1426 Query: 543 aagaaacttctaaacaaagcgggtttatcttgtatg 578 ||||||||| |||| | | |||||||||||||||| Sbjct: 1425 aagaaacttttaaatagtgagggtttatcttgtatg 1390
>ref|XM_475841.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 236 bits (119), Expect = 7e-59 Identities = 317/383 (82%) Strand = Plus / Minus Query: 196 caatgaacagcccccacctctgctcaccagcagagctcctatgaagtttcgcgttccacc 255 |||||||||||||||||||||||||||| |||||||||| | || ||||||||||| | Sbjct: 1477 caatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcgttccagc 1418 Query: 256 cagtcacaatatcgtcatagtcctcctgaccaaagtcggctagaaaatcatctttgttct 315 | ||||||| || || ||||||||||| ||||| || | || | |||||||||| Sbjct: 1417 cgttcacaatgtcatcgtagtcctcctgggtgaagtctgccatgaaggcttctttgttct 1358 Query: 316 tttcaacttcggctagctccctctgtaaaactttcaggaactgatcactgcggtcttcgg 375 | |||||||| || |||||||| || | ||| ||||||||| || |||||||||| | Sbjct: 1357 tctcaacttcagcaagctccctttgaagaacacgcaggaactggtccgtgcggtcttcag 1298 Query: 376 caatgacatcatggaaaccagcattctctagcatctgtccataagtctctacatcatgaa 435 ||||||||| |||||||||||||| ||| ||||||| ||| ||||||| ||||| || | Sbjct: 1297 caatgacatgatggaaaccagcatcctcaagcatctttccgtaagtcttcacatcgtgga 1238 Query: 436 ggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttttcctggactcc 495 |||| || || |||||||||||||| | ||||| ||||| |||||||| || ||| ||| Sbjct: 1237 ggtcatagcctctctgcttaatgtaagcagcaaattcttctgatggtttcccaggattcc 1178 Query: 496 tacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttctaa 555 |||||||||| ||||| ||||| || || |||||||| ||||| |||||||||||||| | Sbjct: 1177 tacagtaatcactgatgaggactttgcccccaggtttcagccacttgaagaaacttctga 1118 Query: 556 acaaagcgggtttatcttgtatg 578 ||||||| |||||||| |||||| Sbjct: 1117 acaaagcaggtttatcatgtatg 1095
>gb|AY551100.1| Oryza sativa (indica cultivar-group) phosphoethanolamine N-methyltransferase (PEAMT) mRNA, complete cds Length = 1986 Score = 194 bits (98), Expect = 2e-46 Identities = 227/270 (84%) Strand = Plus / Minus Query: 309 ttgttcttttcaacttcggctagctccctctgtaaaactttcaggaactgatcactgcgg 368 |||||||||||||||| || |||||||||| || ||| | ||||||||||| ||||| Sbjct: 1574 ttgttcttttcaactttagcaagctccctctctagaacatcgaggaactgatcggtgcgg 1515 Query: 369 tcttcggcaatgacatcatggaaaccagcattctctagcatctgtccataagtctctaca 428 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||| | || Sbjct: 1514 tcttcagcaatgacatcatggaaaccagcattctcaagcatctgtccgtaagccctgacg 1455 Query: 429 tcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttttcct 488 || |||||||| |||||||| ||||||||||| | || |||||||| || ||||| || Sbjct: 1454 tcgtgaaggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttccca 1395 Query: 489 ggactcctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaa 548 || | | | |||||||| || |||||||||||||| |||||||| ||||| ||||||||| Sbjct: 1394 gggcacttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaaa 1335 Query: 549 cttctaaacaaagcgggtttatcttgtatg 578 ||| |||| | | |||||||||||||||| Sbjct: 1334 cttttaaatagtgagggtttatcttgtatg 1305 Score = 113 bits (57), Expect = 7e-22 Identities = 90/101 (89%) Strand = Plus / Minus Query: 183 catcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagt 242 |||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1700 catcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagt 1641 Query: 243 ttcgcgttccacccagtcacaatatcgtcatagtcctcctg 283 || || ||||| ||| ||||||| |||| ||||||||||| Sbjct: 1640 tttgccttccatccattcacaatggcgtcgtagtcctcctg 1600
>gb|AY105261.1| Zea mays PCO129777 mRNA sequence Length = 1012 Score = 135 bits (68), Expect = 2e-28 Identities = 188/228 (82%) Strand = Plus / Minus Query: 351 aggaactgatcactgcggtcttcggcaatgacatcatggaaaccagcattctctagcatc 410 |||||||||||| | || || || |||||||||||| | ||||||||| ||| | |||| Sbjct: 945 aggaactgatcagttcgatcctcagcaatgacatcacgaaaaccagcactcttcaacatc 886 Query: 411 tgtccataagtctctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaac 470 |||||||||| ||| ||| |||| ||||| ||||| |||||||||||||| | ||||| Sbjct: 885 tgtccataagcctccacagcatgtaggtcataacctctctgcttaatgtacgctgcaaat 826 Query: 471 tcttcagatggttttcctggactcctacagtaatcgctgattaggaccttaccaccaggt 530 || || |||||||| || |||||||| ||||| || ||||| |||||||| || ||||| Sbjct: 825 tcctctgatggtttcccaggactcctgcagtagtcactgataaggaccttgcccccaggc 766 Query: 531 tttagccatttgaagaaacttctaaacaaagcgggtttatcttgtatg 578 || ||||| ||||| |||||| | ||||||| |||||| || |||||| Sbjct: 765 ttcagccacttgaaaaaacttttgaacaaagagggtttgtcatgtatg 718
>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05, complete sequence Length = 141715 Score = 119 bits (60), Expect = 1e-23 Identities = 135/160 (84%) Strand = Plus / Plus Query: 417 taagtctctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttca 476 ||||||| ||||| || ||||| || || |||||||||||||| | ||||| ||||| Sbjct: 15163 taagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaattcttct 15222 Query: 477 gatggttttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagc 536 |||||||| || ||| ||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 15223 gatggtttcccaggattcctacagtaatcactgatgaggactttgcccccaggtttcagc 15282 Query: 537 catttgaagaaacttctaaacaaagcgggtttatcttgta 576 || |||||||||||||| |||||||| |||||||| |||| Sbjct: 15283 cacttgaagaaacttctgaacaaagcaggtttatcctgta 15322 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 196 caatgaacagcccccacctctgctcaccagcagagctcctatgaagtttcgcgttccacc 255 |||||||||||||||||||||||||||| |||||||||| | || ||||||||||| | Sbjct: 14625 caatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcgttccagc 14684 Query: 256 cagtcacaatatcgtcatagtcctcctga 284 | ||||||| || || |||||||||||| Sbjct: 14685 cgttcacaatgtcatcgtagtcctcctga 14713 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatct 411 |||||||||| |||||||||| |||||||||||||| ||| ||||||| Sbjct: 15007 tgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 15054 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 tctttgttcttttcaacttcggctagctccct 337 ||||||||||| |||||||| || |||||||| Sbjct: 14825 tctttgttcttctcaacttcagcaagctccct 14856
>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08, complete sequence Length = 166218 Score = 119 bits (60), Expect = 1e-23 Identities = 135/160 (84%) Strand = Plus / Plus Query: 417 taagtctctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttca 476 ||||||| ||||| || ||||| || || |||||||||||||| | ||||| ||||| Sbjct: 41004 taagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaattcttct 41063 Query: 477 gatggttttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagc 536 |||||||| || ||| ||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 41064 gatggtttcccaggattcctacagtaatcactgatgaggactttgcccccaggtttcagc 41123 Query: 537 catttgaagaaacttctaaacaaagcgggtttatcttgta 576 || |||||||||||||| |||||||| |||||||| |||| Sbjct: 41124 cacttgaagaaacttctgaacaaagcaggtttatcctgta 41163 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 196 caatgaacagcccccacctctgctcaccagcagagctcctatgaagtttcgcgttccacc 255 |||||||||||||||||||||||||||| |||||||||| | || ||||||||||| | Sbjct: 40466 caatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcgttccagc 40525 Query: 256 cagtcacaatatcgtcatagtcctcctga 284 | ||||||| || || |||||||||||| Sbjct: 40526 cgttcacaatgtcatcgtagtcctcctga 40554 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatct 411 |||||||||| |||||||||| |||||||||||||| ||| ||||||| Sbjct: 40848 tgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 40895 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 tctttgttcttttcaacttcggctagctccct 337 ||||||||||| |||||||| || |||||||| Sbjct: 40666 tctttgttcttctcaacttcagcaagctccct 40697
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 1e-23 Identities = 135/160 (84%) Strand = Plus / Plus Query: 417 taagtctctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttca 476 ||||||| ||||| || ||||| || || |||||||||||||| | ||||| ||||| Sbjct: 27008581 taagtcttcacatcgtggaggtcatagcctctctgcttaatgtaagcagcaaattcttct 27008640 Query: 477 gatggttttcctggactcctacagtaatcgctgattaggaccttaccaccaggttttagc 536 |||||||| || ||| ||||||||||||| ||||| ||||| || || |||||||| ||| Sbjct: 27008641 gatggtttcccaggattcctacagtaatcactgatgaggactttgcccccaggtttcagc 27008700 Query: 537 catttgaagaaacttctaaacaaagcgggtttatcttgta 576 || |||||||||||||| |||||||| |||||||| |||| Sbjct: 27008701 cacttgaagaaacttctgaacaaagcaggtttatcctgta 27008740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 196 caatgaacagcccccacctctgctcaccagcagagctcctatgaagtttcgcgttccacc 255 |||||||||||||||||||||||||||| |||||||||| | || ||||||||||| | Sbjct: 27008043 caatgaacagcccccacctctgctcaccggcagagctccgcttcagcttcgcgttccagc 27008102 Query: 256 cagtcacaatatcgtcatagtcctcctga 284 | ||||||| || || |||||||||||| Sbjct: 27008103 cgttcacaatgtcatcgtagtcctcctga 27008131 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatct 411 |||||||||| |||||||||| |||||||||||||| ||| ||||||| Sbjct: 27008425 tgcggtcttcagcaatgacatgatggaaaccagcatcctcaagcatct 27008472 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 tctttgttcttttcaacttcggctagctccct 337 ||||||||||| |||||||| || |||||||| Sbjct: 27008243 tctttgttcttctcaacttcagcaagctccct 27008274
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 183 catcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagt 242 |||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 28737733 catcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagt 28737674 Query: 243 ttcgcgttccacccagtcacaatatcgtcatagtcctcctga 284 || || ||||| ||| ||||||| |||| |||||||||||| Sbjct: 28737673 tttgccttccatccattcacaatggcgtcgtagtcctcctga 28737632 Score = 89.7 bits (45), Expect = 9e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 432 tgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttttcctgga 491 |||||||| |||||||| ||||||||||| | || |||||||| || ||||| || || Sbjct: 28737196 tgaaggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccaggg 28737137 Query: 492 ctcctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaactt 551 | | | |||||||| || |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 28737136 cacttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaaactt 28737077 Query: 552 ctaaa 556 |||| Sbjct: 28737076 ttaaa 28737072 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctg 412 |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28737358 tgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatctg 28737310 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 308 tttgttcttttcaacttcggctagctccctct 339 ||||||||||||||||| || |||||||||| Sbjct: 28737519 tttgttcttttcaactttagcaagctccctct 28737488
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 183 catcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagt 242 |||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 120807 catcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagt 120748 Query: 243 ttcgcgttccacccagtcacaatatcgtcatagtcctcctga 284 || || ||||| ||| ||||||| |||| |||||||||||| Sbjct: 120747 tttgccttccatccattcacaatggcgtcgtagtcctcctga 120706 Score = 89.7 bits (45), Expect = 9e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 432 tgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttttcctgga 491 |||||||| |||||||| ||||||||||| | || |||||||| || ||||| || || Sbjct: 120270 tgaaggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccaggg 120211 Query: 492 ctcctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaactt 551 | | | |||||||| || |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 120210 cacttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaaactt 120151 Query: 552 ctaaa 556 |||| Sbjct: 120150 ttaaa 120146 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctg 412 |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 120432 tgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatctg 120384 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 308 tttgttcttttcaacttcggctagctccctct 339 ||||||||||||||||| || |||||||||| Sbjct: 120593 tttgttcttttcaactttagcaagctccctct 120562
>dbj|AK102037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081D06, full insert sequence Length = 3221 Score = 115 bits (58), Expect = 2e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 183 catcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcctatgaagt 242 |||||||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2985 catcacttggtcgcgatgaacagcccccacctctgctcaccagcagaactcctttgaagt 2926 Query: 243 ttcgcgttccacccagtcacaatatcgtcatagtcctcctga 284 || || ||||| ||| ||||||| |||| |||||||||||| Sbjct: 2925 tttgccttccatccattcacaatggcgtcgtagtcctcctga 2884 Score = 89.7 bits (45), Expect = 9e-15 Identities = 105/125 (84%) Strand = Plus / Minus Query: 432 tgaaggtcgtaacccctctgcttaatgtatgacgcaaactcttcagatggttttcctgga 491 |||||||| |||||||| ||||||||||| | || |||||||| || ||||| || || Sbjct: 2448 tgaaggtcataacccctttgcttaatgtaagctgcgaactcttctgaaggtttcccaggg 2389 Query: 492 ctcctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaactt 551 | | | |||||||| || |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 2388 cacttgcagtaatcactaattaggaccttacccccaggtttgagccacttgaagaaactt 2329 Query: 552 ctaaa 556 |||| Sbjct: 2328 ttaaa 2324 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 364 tgcggtcttcggcaatgacatcatggaaaccagcattctctagcatctg 412 |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 2610 tgcggtcttcagcaatgacatcatggaaaccagcattctcaagcatctg 2562 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 308 tttgttcttttcaacttcggctagctccctct 339 ||||||||||||||||| || |||||||||| Sbjct: 2771 tttgttcttttcaactttagcaagctccctct 2740
>gb|AY065971.1| Triticum aestivum phosphoethanolamine methyltransferase mRNA, complete cds Length = 1782 Score = 67.9 bits (34), Expect = 3e-08 Identities = 178/226 (78%) Strand = Plus / Minus Query: 349 tcaggaactgatcactgcggtcttcggcaatgacatcatggaaaccagcattctctagca 408 |||||||||| || ||||||| || || | ||||||||||||||| |||| ||| |||| Sbjct: 1383 tcaggaactggtcggtgcggtcctcagcgacgacatcatggaaaccggcatcctcaagca 1324 Query: 409 tctgtccataagtctctacatcatgaaggtcgtaacccctctgcttaatgtatgacgcaa 468 ||| ||| || |||| |||||||| ||||| || || |||||||| ||||| | || | Sbjct: 1323 tctttccgtaggtcttcacatcatggaggtcatagcctctctgcttgatgtacgcagcga 1264 Query: 469 actcttcagatggttttcctggactcctacagtaatcgctgattaggaccttaccaccag 528 | || || |||||| | || || ||||| ||||| || ||||| || || || || |||| Sbjct: 1263 attcctctgatggtgtcccagggctcctgcagtagtcactgatcagcactttgcccccag 1204 Query: 529 gttttagccatttgaagaaacttctaaacaaagcgggtttatcttg 574 | || ||||| |||||||| |||| |||| ||| ||||| ||||| Sbjct: 1203 gcttgagccacttgaagaagtttctgaacagagcaggtttgtcttg 1158 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 184 atcacttggtcccaatgaacagcccccacctctgctcaccagcagagctcc 234 ||||||||||| | ||||||||||||||| ||||||| || |||||||||| Sbjct: 1548 atcacttggtcgcgatgaacagcccccacttctgctcgccggcagagctcc 1498
>ref|NM_112681.3| Arabidopsis thaliana NMT1 (N-METHYLTRANSFERASE 1); phosphoethanolamine N-methyltransferase AT3G18000 (NMT1) mRNA, complete cds Length = 1912 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1378 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1319 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1318 aacaaggctggtttgtcttg 1299
>gb|AY093093.1| Arabidopsis thaliana unknown protein (At3g17990:At3g18000) mRNA, complete cds Length = 1911 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1378 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1319 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1318 aacaaggctggtttgtcttg 1299
>gb|AY091683.1| Arabidopsis thaliana AT3g18000/MEB5_22 mRNA, complete cds Length = 1476 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1163 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1104 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1103 aacaaggctggtttgtcttg 1084
>gb|AF367299.1| Arabidopsis thaliana AT3g18000/MEB5_22 mRNA, complete cds Length = 1809 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1303 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1244 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1243 aacaaggctggtttgtcttg 1224
>gb|AY058175.1| Arabidopsis thaliana AT3g18000/MEB5_22 mRNA, complete cds Length = 1770 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1378 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1319 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1318 aacaaggctggtttgtcttg 1299
>gb|AF197940.1|AF197940 Arabidopsis thaliana SAM:phospho-ethanolamine N-methyltransferase (NMT1) mRNA, complete cds Length = 1878 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 1364 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 1305 Query: 555 aacaaagcgggtttatcttg 574 ||||| || ||||| ||||| Sbjct: 1304 aacaaggctggtttgtcttg 1285
>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5 Length = 74968 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 495 ctacagtaatcgctgattaggaccttaccaccaggttttagccatttgaagaaacttcta 554 |||||||| |||||||| || || ||||| || ||||| ||||||||||||||| | ||| Sbjct: 67291 ctacagtagtcgctgatgagaactttacctcccggtttaagccatttgaagaaagtccta 67232 Query: 555 aacaaagcgggttt 568 ||||| || ||||| Sbjct: 67231 aacaaggctggttt 67218
>gb|AC109489.3| Homo sapiens chromosome 5 clone RP11-63G23, complete sequence Length = 148131 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 388 ggaaaccagcattctctagcatct 411 |||||||||||||||||||||||| Sbjct: 5144 ggaaaccagcattctctagcatct 5167
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence Length = 190848 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 388 ggaaaccagcattctctagcatct 411 |||||||||||||||||||||||| Sbjct: 155251 ggaaaccagcattctctagcatct 155274
>gb|AC138199.22| Medicago truncatula clone mth2-15g10, complete sequence Length = 109479 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 375 gcaatgacatcatggaaaccagcattctctagcatctgt 413 ||||||||||||| || ||||||||||| ||||||||| Sbjct: 77887 gcaatgacatcatcaaatccagcattctcaagcatctgt 77849
>gb|AC154289.1| Mus musculus BAC clone RP23-449E11 from chromosome 16, complete sequence Length = 191617 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 298 gaaaatcatctttgttcttttca 320 ||||||||||||||||||||||| Sbjct: 159784 gaaaatcatctttgttcttttca 159806
>gb|BT014099.1| Lycopersicon esculentum clone 133203F, mRNA sequence Length = 1992 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 196 caatgaacagcccccacctctgctcaccag 225 ||||||||| ||||||||||||||||||| Sbjct: 1793 caatgaacaagccccacctctgctcaccag 1764
>emb|AL157948.10| Human DNA sequence from clone RP4-686N16 on chromosome 1p31.3-33 Contains the 3' end of gene KIAA1365, complete sequence Length = 94870 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 480 ggttttcctggactcctacagt 501 |||||||||||||||||||||| Sbjct: 91074 ggttttcctggactcctacagt 91095
>gb|AF328858.1|AF328858 Lycopersicon esculentum phosphoethanolamine N-methyltransferase mRNA, complete cds Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 196 caatgaacagcccccacctctgctcaccag 225 ||||||||| ||||||||||||||||||| Sbjct: 1567 caatgaacaagccccacctctgctcaccag 1538
>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence Length = 176948 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 342 aaaactttcaggaactgatcactgcg 367 ||||||||| |||||||||||||||| Sbjct: 104834 aaaactttctggaactgatcactgcg 104809
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 accagctttcccgaatcaccga 82 |||||||||||||||||||||| Sbjct: 1449400 accagctttcccgaatcaccga 1449379
>gb|AY650394.1| Epioblasma capsaeformis clone Ecap6 microsatellite sequence Length = 239 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 gttccacccagtcacaatatc 268 ||||||||||||||||||||| Sbjct: 186 gttccacccagtcacaatatc 206
>gb|AC142336.1| Pan troglodytes BAC clone RP43-39E5 from 7, complete sequence Length = 75539 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 tatcaattgcaaaaccaaatt 120 ||||||||||||||||||||| Sbjct: 22583 tatcaattgcaaaaccaaatt 22603
>ref|NM_001030511.1| Xenopus tropicalis th1l protein (th1l), mRNA Length = 2006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaactcttcagatggttttcc 487 ||||||||||||||||||||| Sbjct: 389 aaactcttcagatggttttcc 369
>gb|BC093471.1| Xenopus tropicalis th1l protein, mRNA (cDNA clone MGC:97828 IMAGE:6992149), complete cds Length = 2006 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 aaactcttcagatggttttcc 487 ||||||||||||||||||||| Sbjct: 389 aaactcttcagatggttttcc 369
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 511 ttaggaccttaccaccaggttttag 535 ||||||||||| ||||||||||||| Sbjct: 2140981 ttaggaccttatcaccaggttttag 2140957
>emb|AL806517.9| Mouse DNA sequence from clone RP23-20K17 on chromosome 4, complete sequence Length = 192432 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tgcaaaaccaaattatgaaaa 127 ||||||||||||||||||||| Sbjct: 189831 tgcaaaaccaaattatgaaaa 189851
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gccactttatttgcttgcag 164 |||||||||||||||||||| Sbjct: 1584798 gccactttatttgcttgcag 1584817
>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence Length = 176410 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 aaaatcatctttgttctttt 318 |||||||||||||||||||| Sbjct: 171301 aaaatcatctttgttctttt 171282
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tgaaaaaggccacatgaaat 141 |||||||||||||||||||| Sbjct: 112333 tgaaaaaggccacatgaaat 112352
>gb|AY449593.1| Gnetum aff. microcarpum Won 533 clone C1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 984 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ctgggccatcacttggtccc 196 |||||||||||||||||||| Sbjct: 339 ctgggccatcacttggtccc 358
>emb|AL359753.9| Human DNA sequence from clone RP11-520H16 on chromosome 1 Contains the IFIX gene for interferon-inducible protein X, the IFI16 gene for interferon, gamma-inducible protein 16, the 3' end of the AIM2 gene for absent in melanoma 2 and a RAD1 homolog (S. pombe) (RAD1) pseudogene, complete sequence Length = 180742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atatcaattgcaaaaccaaa 118 |||||||||||||||||||| Sbjct: 109780 atatcaattgcaaaaccaaa 109761
>emb|AL022239.1|HS3E5 Human DNA sequence from clone RP1-3E5 on chromosome 20q12-13.12 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T, ESTs, STSs and GSSs, complete sequence Length = 134137 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 caaaaccaaattatgaaaaaggcc 132 ||||||||||||||||| |||||| Sbjct: 46007 caaaaccaaattatgaacaaggcc 46030
>gb|AC129912.2| Homo sapiens chromosome 11, clone CTC-830J2, complete sequence Length = 121025 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 acagatctgggccatcactt 190 |||||||||||||||||||| Sbjct: 111031 acagatctgggccatcactt 111050
>emb|CR407548.6| Zebrafish DNA sequence from clone DKEY-166N22 in linkage group 25, complete sequence Length = 136155 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cttcggcaatgacatcatgg 389 |||||||||||||||||||| Sbjct: 84782 cttcggcaatgacatcatgg 84763
>gb|AC121764.2| Homo sapiens chromosome 3 clone RP11-875H7, complete sequence Length = 201379 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 gataggtaaatatcaattgcaaaa 113 |||||||||||||||||| ||||| Sbjct: 949 gataggtaaatatcaattacaaaa 926
>gb|AC104042.5| Homo sapiens chromosome 11, clone CTD-2119L1, complete sequence Length = 109477 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 acagatctgggccatcactt 190 |||||||||||||||||||| Sbjct: 80785 acagatctgggccatcactt 80766
>gb|AC121248.2| Homo sapiens chromosome 3 clone RP11-64C1, complete sequence Length = 185845 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 gataggtaaatatcaattgcaaaa 113 |||||||||||||||||| ||||| Sbjct: 180882 gataggtaaatatcaattacaaaa 180859
>gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, complete sequence Length = 180418 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 ccttaccaccaggttttagc 536 |||||||||||||||||||| Sbjct: 143816 ccttaccaccaggttttagc 143797
>gb|AC137711.21| Mus musculus chromosome 5, clone RP23-282A16, complete sequence Length = 181459 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 aaaatcatctttgttctttt 318 |||||||||||||||||||| Sbjct: 37097 aaaatcatctttgttctttt 37078
>gb|AC011359.5|AC011359 Homo sapiens chromosome 5 clone CTC-370H24, complete sequence Length = 195887 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 aagaaacttctaaacaaagc 562 |||||||||||||||||||| Sbjct: 164866 aagaaacttctaaacaaagc 164847
>gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, complete sequence Length = 142965 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 catcatggaaaccagcattc 401 |||||||||||||||||||| Sbjct: 78188 catcatggaaaccagcattc 78169
>emb|CR354425.7| Zebrafish DNA sequence from clone CH211-93N11 in linkage group 25, complete sequence Length = 161571 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cttcggcaatgacatcatgg 389 |||||||||||||||||||| Sbjct: 95548 cttcggcaatgacatcatgg 95529
>dbj|AB080186.1| Suaeda japonica PEAMT mRNA for phosphoethanolamine N-methyltransferase, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 425 tacatcatgaaggtcgtaacccctctgcttaatgta 460 ||||||||| || || || ||||||||||||||||| Sbjct: 1356 tacatcatggagatcatatcccctctgcttaatgta 1321
>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence Length = 155999 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 gcagagctcctatgaagttt 244 |||||||||||||||||||| Sbjct: 95980 gcagagctcctatgaagttt 95961
>gb|AF538305.1| HIV-1 clone C42 from Australia gag protein (gag) gene, complete cds; truncated pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds Length = 9437 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 gcaaaaccaaattatgaaaaaggc 131 |||||||||||||| ||||||||| Sbjct: 1110 gcaaaaccaaattaagaaaaaggc 1133
>dbj|AP002534.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 3/4 Length = 300000 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atatcaattgcaaaaccaaa 118 |||||||||||||||||||| Sbjct: 235153 atatcaattgcaaaaccaaa 235134
>dbj|AB045363.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:527i23, complete sequence Length = 134222 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 atatcaattgcaaaaccaaa 118 |||||||||||||||||||| Sbjct: 103579 atatcaattgcaaaaccaaa 103560 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,302,288 Number of Sequences: 3902068 Number of extensions: 5302288 Number of successful extensions: 106557 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106334 Number of HSP's gapped (non-prelim): 211 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)