>PRD_DROME (P06601) Segmentation protein paired|
          Length = 613

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = +2

Query: 8   PALASQPHPSFLHS--AAPPRSHQSARPHRSPDSDHLCHPPCPS*SLECSLLNSPALKIP 181
           P  AS P P   HS    P   H  A PH      H  +PP PS S      N  A   P
Sbjct: 535 PQYASYPAPGHAHSHHGHPHAPHPHAHPHPQYAGAHPHYPP-PSSSAHFMPQNFNAAAFP 593

Query: 182 CPQK*MWTXV 211
            P K  +T +
Sbjct: 594 SPSKVNYTTM 603

>HSF30_LYCPE (P41152) Heat shock factor protein HSF30 (Heat shock transcription|
           factor 30) (HSTF 30) (Heat stress transcription factor)
          Length = 351

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
 Frame = -2

Query: 392 QKQLQMMGFXARAIQNXXXXXXXXXXXXXXXXXXDPYPTKRRRSINVMPFLGXEGTSQSE 213
           +KQ+QMM F A+   N                       ++RR + + P +   G+ Q  
Sbjct: 188 RKQVQMMSFLAKIFSNPTFLQQYLDKQVHRKDKQRIEVGQKRR-LTMTPSV--TGSDQPM 244

Query: 212 QLESTFIFEDREFSELENL---AMNIQGIRKGMEDDKGGRSQGCGEAELTDDFWEELLSE 42
              S+    + E + +E L   AM+ +     +  D    + G     + DD WEELLSE
Sbjct: 245 NYSSSLQESEAELASIEMLFSAAMDNES-SSNVRPDSVVTANGTDMEPVADDIWEELLSE 303

Query: 41  GM 36
            +
Sbjct: 304 DL 305

>PHLA1_MOUSE (Q62392) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Proline- and
           glutamine-rich protein) (PQR protein)
          Length = 261

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 8   PALASQPHPSFLHSAAPPRSHQSARPHRSPDSDHLCHP 121
           P    QP P  LHS   P  H  + PH+ P      HP
Sbjct: 191 PQPQPQPQPQQLHSYPHPHPHPYSHPHQHPHPHPHPHP 228

>KSGA_AERPE (Q9YEM5) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase)
          Length = 277

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
 Frame = -2

Query: 275 KRRRSINVMPFLGXEGTSQSEQLESTFIFEDREFSE----LENLAMNIQGIRKGMEDDKG 108
           +RR    V   LG  G   S++L   F+ +DR   E    LE  A   +GIR+ +E   G
Sbjct: 10  RRRAESLVREVLGLAGLRPSDRLGQHFLIDDRAVGEFLKPLEKAA--AEGIREALEIGPG 67

Query: 107 GRSQGCGEAELTD 69
             S     AE+ D
Sbjct: 68  AGSITLPAAEVLD 80

>FA53C_MOUSE (Q8BXQ8) Protein FAM53C|
          Length = 393

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 16/86 (18%)
 Frame = +2

Query: 29  HPS--FLHSAAPPRSHQSARPHRS-------PDSDHLCHPPCPS*SLECSLLNSPA---- 169
           HPS   LH   P R +    P  S       PD + L  PP P     C  L+ P     
Sbjct: 70  HPSGLSLHLRPPSRGNSPKEPPLSQVLSPEPPDPEKLPVPPAPPSKRHCRSLSVPVDLSR 129

Query: 170 ---LKIPCPQK*MWTXVAHSDSSPXG 238
              +  P P K +WT + H  ++  G
Sbjct: 130 WQPVWRPAPSK-LWTPIKHRGNAGGG 154

>FA53C_HUMAN (Q9NYF3) Protein FAM53C|
          Length = 392

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 17/87 (19%)
 Frame = +2

Query: 29  HPS--FLHSAAPPRSH--------QSARPHRSPDSDHLCHPPCPS*SLECSLLNSPA--- 169
           HPS   LH   P R +        Q  RP   PD + L  PP P     C  L+ P    
Sbjct: 70  HPSGLSLHLRPPSRGNSPKEQPFSQVLRPE-PPDPEKLPVPPAPPSKRHCRSLSVPVDLS 128

Query: 170 ----LKIPCPQK*MWTXVAHSDSSPXG 238
               +  P P K +WT + H  S   G
Sbjct: 129 RWQPVWRPAPSK-LWTPIKHRGSGGGG 154

>EXEC1_ARATH (Q93YW0) EXECUTER1 protein, chloroplast precursor|
          Length = 684

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = +2

Query: 14  LASQPHPSFLHSAAPPRSHQSARPHRSPDSDHLC 115
           LA  P  S   S   P S +S  PHR PD   LC
Sbjct: 12  LAFSPAASATSSRLTPSSKRSFYPHRLPDPTALC 45

>SYS_LEGPL (Q5WZ31) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -2

Query: 218 SEQLESTFIFEDREFSELENLAMNIQGIRKGMEDDKGGRSQGCGEA----ELTDDFWEEL 51
           ++ L+  F F+   FS+LE     +Q   + +++++  RS+  GEA    E  +   EE+
Sbjct: 16  TQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGEAKSRGENIEPMREEV 75

Query: 50  LSEGMRDEAEMLELE 6
              G + E +  EL+
Sbjct: 76  NKLGAKLEQQKTELD 90

>SYS_LEGPA (Q5X7N0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 426

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -2

Query: 218 SEQLESTFIFEDREFSELENLAMNIQGIRKGMEDDKGGRSQGCGEA----ELTDDFWEEL 51
           ++ L+  F F+   FS+LE     +Q   + +++++  RS+  GEA    E  +   EE+
Sbjct: 16  TQLLKRGFQFDAVTFSQLEEKRKALQVSTQSLQNERNLRSKAIGEAKSRGENIEPMREEV 75

Query: 50  LSEGMRDEAEMLELE 6
              G + E +  EL+
Sbjct: 76  NKLGAKLEQQKTELD 90

>OAZ1_BRARE (Q9YI98) Ornithine decarboxylase antizyme 1 (ODC antizyme, short|
           form) (ODC-Az-S)
          Length = 214

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 98  DSDHLCHPPCPS*SLECSLLNSPALKIP 181
           +S H C  PCP   L CS +  P LKIP
Sbjct: 39  ESSHRCSNPCPG-PLWCSDVPLPPLKIP 65

>PROP1_CANFA (Q9TTD8) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 8   PALASQPHPSFLHS--AAPPRSHQSARPHRSPDSDHLCHPPCPS*SLEC 148
           P +   PHP + H+  + P      ARPH+S D     HPP P+  L C
Sbjct: 162 PPMTCFPHP-YNHALPSQPSTGGSFARPHQSEDWYPTLHPP-PTGHLPC 208

>FA53C_PONPY (Q5R815) Protein FAM53C|
          Length = 392

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 27/87 (31%), Positives = 32/87 (36%), Gaps = 17/87 (19%)
 Frame = +2

Query: 29  HPS--FLHSAAPPRSH--------QSARPHRSPDSDHLCHPPCPS*SLECSLLNSPA--- 169
           HPS   LH   P R          Q  RP   PD + L  PP P     C  L+ P    
Sbjct: 70  HPSGLSLHLRPPSRGSSPKEQPLSQVLRPE-PPDPEKLPVPPAPPSKRHCRSLSVPVDLS 128

Query: 170 ----LKIPCPQK*MWTXVAHSDSSPXG 238
               +  P P K +WT + H  S   G
Sbjct: 129 RWQPVWRPAPSK-LWTPIKHRGSGGGG 154

>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +2

Query: 8   PALASQPHPSFLHSAAPPRSHQSARPHRSPDSDHL 112
           P  +  P PS     +PP    S R  RSP  D L
Sbjct: 18  PGTSYSPQPSVSRKRSPPSRSPSPRRRRSPPGDSL 52

>PPIG_HUMAN (Q13427) Peptidyl-prolyl cis-trans isomerase G (EC 5.2.1.8)|
           (Peptidyl-prolyl isomerase G) (PPIase G) (Rotamase G)
           (Cyclophilin G) (Clk-associating RS-cyclophilin)
           (CARS-cyclophilin) (CARS-Cyp) (SR-cyclophilin) (SRcyp)
           (SR-cyp) (CASP10)
          Length = 754

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 26  PHPSFLHSAAPPRSHQSARPHRSPDSDHLCHPP 124
           P   FL   +PP++ +  R +R  + +  C+PP
Sbjct: 281 PENRFLMRKSPPKADEKERKNRERERERECNPP 313

>KNU_ARATH (Q9FFX4) Zinc-finger protein KNUCKLES|
          Length = 161

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 20  SQPHPSFLHSAAPPRSHQSARPHRSPDSDH 109
           ++P PS+LH   P ++  S++ H    S H
Sbjct: 2   AEPPPSYLHFVGPAKTRSSSKRHSFSSSAH 31

>UL47_VZVD (P09263) Alpha trans-inducing factor 91.8 kDa protein|
          Length = 819

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
 Frame = -2

Query: 218 SEQLESTFIFEDREFSELENLAMNIQGIRKGMEDDKGGRSQGCGEAELTDDFWE----EL 51
           SEQ  ST   E+R F   E  A     I     DD+G   +G  E +  DD  E    E 
Sbjct: 87  SEQNTSTSRHENRIFKLTEREANEEININTDAIDDEGEAEEGEAEEDAIDDEGEAEEGEA 146

Query: 50  LSEGMRDEAEMLELE 6
             + + DE E  E E
Sbjct: 147 EEDAIDDEGEAEEGE 161

>YOT3_CAEEL (P34649) Putative RIO-type serine/threonine-protein kinase ZK632.3|
           (EC 2.7.11.1)
          Length = 510

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -2

Query: 287 PYPTKRRRSINVMPFLGXEGTS--QSEQLESTFIFEDREFSELENLAMNIQGI 135
           P P K RR++ VM FLG +G +  + + +E  F  +D    E  N+   +Q I
Sbjct: 326 PQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDD----ERRNVYDQVQSI 374

>VE4_HPV57 (P22157) Probable protein E4|
          Length = 124

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +2

Query: 47  SAAPPRSHQSARPH-RSPDSDHLCHPPCPS*SLECSLLNSPALK 175
           S   P+  Q +RPH R+P   H    P  S S   S  NSP L+
Sbjct: 46  SQPQPQPQQQSRPHSRTPPRRHRVRHPSASGSSSDSSGNSPTLR 89

>SYS_PASMU (P57836) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 428

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/64 (21%), Positives = 33/64 (51%)
 Frame = -2

Query: 233 EGTSQSEQLESTFIFEDREFSELENLAMNIQGIRKGMEDDKGGRSQGCGEAELTDDFWEE 54
           E  ++  +++  F+ +    SELE    ++Q   + ++ ++  RS+  G+A+   +    
Sbjct: 12  EEVAEKLKVKRNFVLDVALLSELEEQRKSLQVKTESLQAERNARSKNIGQAKARGEDISA 71

Query: 53  LLSE 42
           LL+E
Sbjct: 72  LLNE 75

>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene|
           homolog)
          Length = 1111

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
 Frame = +2

Query: 8   PALASQPHPSFLHSAAPPRSHQSARPHRSPDSDHLCHPPCPS*SLECSLLNSPALKI-PC 184
           P+L   P  S     +PP   Q   PH S     + HP        C L +   + +  C
Sbjct: 134 PSLGFPPQMSHQKGTSPPYGVQPCVPHDSTRGSMMLHPQARGPRATCQLKSELDMMVGKC 193

Query: 185 PQ 190
           P+
Sbjct: 194 PE 195

>SDK1_MOUSE (Q3UH53) Protein sidekick-1 precursor|
          Length = 2193

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +2

Query: 50  AAPPRSHQSARPHRSPDSDHLCHPPCP 130
           AAPP      RP RS    H C P CP
Sbjct: 14  AAPPERAGPGRPRRSRTGHH-CDPECP 39

>DOT1L_DROME (Q8INR6) Histone-lysine N-methyltransferase, H3 lysine-79 specific|
            (EC 2.1.1.43) (Histone H3-K79 methyltransferase)
            (H3-K79-HMTase) (Protein grappa) (DOT1-like protein)
            (dDOT1L)
          Length = 1848

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 11   ALASQPHPSFLHSAAPPRSHQ 73
            A+ S P PS LHS AP RS Q
Sbjct: 1043 AVESSPSPSPLHSPAPKRSKQ 1063

>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)|
          Length = 582

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = +2

Query: 8   PALASQPHPSFLHSAAPPRSHQSA--RPHRSPDSDHLCHPP 124
           P L+ +P P  L S  PP S   A   PH  P    +  PP
Sbjct: 353 PKLSHRPQPELLKSTLPPPSTTPAPLPPHPHPHPHSVALPP 393

>ALR_AQUPY (Q9RER4) Alanine racemase (EC 5.1.1.1)|
          Length = 341

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = -2

Query: 284 YPTKRRRSINVMPFLGXEGTSQSEQLESTFIFEDREFSELENLAMNI 144
           Y TKR+  + V+ F   +G  ++    S  IFE R+   + N+ M++
Sbjct: 240 YITKRKTKLGVVAFGYADGLMKTLSNRSFLIFEGRKVPIIGNITMDM 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,371,469
Number of Sequences: 219361
Number of extensions: 718292
Number of successful extensions: 2474
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2466
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)