>emb|X60343.1|HVGADPH H.vulgare GADPH mRNA for glycolytic glyceraldehyde-3-phosphate
            dehydrogenase
          Length = 1365

 Score =  281 bits (142), Expect = 3e-73
 Identities = 161/169 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    tagcanctcgcngcggaaaaacagatggtaactcatgtccaactaacatgaaccaggcgt 60
            ||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 tagcaactcggtgcggaaaaacagatggtaactcatgtccaactaacatgaaccaggcgt 1136

                                                                        
Query: 61   ctagcgacaccatccacatnccttcccatagacaaaggggcncctctgaccaggcgccac 120
            |||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||
Sbjct: 1135 ctagcgacaccatccacatttattcccatagacaaaggggcacctctgaccaggcgccac 1076

                                                             
Query: 121  anggaaagcagaacgctctactgggtcttggccatgtggcggatcaggt 169
            | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 aaggaaagcagaacgctctactgggtcttggccatgtggcggatcaggt 1027

>gb|AY290728.1| Triticum aestivum glyceraldehyde 3-phosphate dehydrogenase-like
           mRNA, partial sequence
          Length = 496

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 60/65 (92%), Gaps = 3/65 (4%)
 Strand = Plus / Minus

                                                                       
Query: 18  aaaacagatggtaactcatgtccaactaacatgaaccagg---cgtctagcgacaccatc 74
           |||||||| |||||||||||||||||||||||||||||||   ||||| |||||||||||
Sbjct: 406 aaaacagaaggtaactcatgtccaactaacatgaaccaggcgtcgtctggcgacaccatc 347

                
Query: 75  cacat 79
           |||||
Sbjct: 346 cacat 342



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 123 ggaaagcagaacgctctactgggtcttggccatgtggcggatcag 167
           ||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 300 ggaaatcagaacgctctactgagtcttggccatgtggcggatcag 256

>ref|XM_479895.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1356

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1059 tctactgggtcttggccatgtggcggatcaggt 1027

>ref|XM_507107.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1163_G08.15 mRNA
          Length = 1518

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1092 tctactgggtcttggccatgtggcggatcaggt 1060

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                                
Query: 137     tctactgggtcttggccatgtggcggatcaggt 169
               |||||||||||||||||||||||||||||||||
Sbjct: 1522421 tctactgggtcttggccatgtggcggatcaggt 1522389

>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1163_G08
          Length = 150676

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                              
Query: 137   tctactgggtcttggccatgtggcggatcaggt 169
             |||||||||||||||||||||||||||||||||
Sbjct: 49909 tctactgggtcttggccatgtggcggatcaggt 49877

>dbj|AK105038.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C12, full
           insert sequence
          Length = 455

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                            
Query: 137 tctactgggtcttggccatgtggcggatcaggt 169
           |||||||||||||||||||||||||||||||||
Sbjct: 236 tctactgggtcttggccatgtggcggatcaggt 204

>dbj|AK103777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033144F10, full
            insert sequence
          Length = 1356

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1059 tctactgggtcttggccatgtggcggatcaggt 1027

>dbj|AK100159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020L08, full
            insert sequence
          Length = 1783

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1530 tctactgggtcttggccatgtggcggatcaggt 1498

>dbj|AK071097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080G06, full
            insert sequence
          Length = 1518

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1092 tctactgggtcttggccatgtggcggatcaggt 1060

>gb|U31676.1|OSU31676 Oryza sativa clone glyceraldehyde-3-phosphate dehydrogenase (Gpc)
            mRNA, complete cds
          Length = 1326

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 137  tctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||||||||||||||||||||
Sbjct: 1043 tctactgggtcttggccatgtggcggatcaggt 1011

>gb|BT016387.1| Zea mays clone Contig220 mRNA sequence
          Length = 1571

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 136  ctctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||  |||||||||||||||||
Sbjct: 1242 ctctactgggtcttgaacatgtggcggatcaggt 1209

>emb|X73151.1|ZMGAPC2 Z.mays GapC2 gene
          Length = 6166

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 136  ctctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||  |||||||||||||||||
Sbjct: 5814 ctctactgggtcttgaacatgtggcggatcaggt 5781

>emb|X15596.1|ZMGPC1 Maize Gpc1 gene for glyceraldehyde-3-phosphate dehydrogenase (GADPH)
            subunit C
          Length = 5955

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 136  ctctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||  |||||||||||||||||
Sbjct: 5494 ctctactgggtcttgaacatgtggcggatcaggt 5461

>gb|L13432.1|MZEGAPDB Zea mays GAPC2 glyceraldehyde-3-phosphate dehydrogenase mRNA,
           partial cds
          Length = 971

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 136 ctctactgggtcttggccatgtggcggatcaggt 169
           |||||||||||||||  |||||||||||||||||
Sbjct: 747 ctctactgggtcttgaacatgtggcggatcaggt 714

>gb|U45858.1|ZMU45858 Zea mays glyceraldehyde-3-phosphate dehydrogenase (gpc2) gene,
            complete cds
          Length = 4590

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 136  ctctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||  |||||||||||||||||
Sbjct: 4473 ctctactgggtcttgaacatgtggcggatcaggt 4440

>gb|U45855.1|ZMU45855 Zea mays glyceraldehyde-3-phosphate dehydrogenase GAPC2 (gpc2) mRNA,
            complete cds
          Length = 1307

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 136  ctctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||||  |||||||||||||||||
Sbjct: 1082 ctctactgggtcttgaacatgtggcggatcaggt 1049

>gb|BT016419.1| Zea mays clone Contig252 mRNA sequence
          Length = 1442

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 138  ctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||  |||||||||||||||||
Sbjct: 1080 ctactgggtcttgaacatgtggcggatcaggt 1049

>gb|AY109359.1| Zea mays CL2022_2 mRNA sequence
          Length = 3495

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 138  ctactgggtcttggccatgtggcggatcaggt 169
            |||||||||||||  |||||||||||||||||
Sbjct: 3120 ctactgggtcttgaacatgtggcggatcaggt 3089

>gb|AC133480.2| Homo sapiens 12 BAC RP11-12K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128301

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    aactcatgtccaactaacatgaac 53
             |||||||||||||| |||||||||
Sbjct: 82729 aactcatgtccaacaaacatgaac 82752

>emb|X07156.1|ZMCGAPDH Maize mRNA for cytosolic GAPDH (GapC) glyceraldehyde-3-phosphate
            dehydrogenase
          Length = 1305

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 138  ctactgggtcttggccatgtggcggatcaggt 169
            |||||||| ||||  |||||||||||||||||
Sbjct: 1088 ctactgggacttgaacatgtggcggatcaggt 1057

>gb|AC023886.7| Homo sapiens BAC clone RP11-402J6 from 4, complete sequence
          Length = 179697

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     gaaaaacagatggtaactca 35
              ||||||||||||||||||||
Sbjct: 107786 gaaaaacagatggtaactca 107805

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                     
Query: 76      acatnccttcccatagacaaag 97
               |||| |||||||||||||||||
Sbjct: 2160804 acatcccttcccatagacaaag 2160783

>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 144    ggtcttggccatgtggcgg 162
              |||||||||||||||||||
Sbjct: 142941 ggtcttggccatgtggcgg 142923

>gb|AC078886.20| Homo sapiens 12 BAC RP11-299A16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 36964

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 17    aaaaacagatggtaactcatgtc 39
             |||||||||||| ||||||||||
Sbjct: 32801 aaaaacagatggaaactcatgtc 32823

>gb|AC108150.4| Homo sapiens BAC clone RP11-492E24 from 2, complete sequence
          Length = 75818

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    tcatgtccaactaacatga 51
             |||||||||||||||||||
Sbjct: 60722 tcatgtccaactaacatga 60740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 755,862
Number of Sequences: 3902068
Number of extensions: 755862
Number of successful extensions: 45468
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45427
Number of HSP's gapped (non-prelim): 40
length of query: 171
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 149
effective length of database: 17,147,199,772
effective search space: 2554932766028
effective search space used: 2554932766028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)