ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clon... 285 7e-74
2ref|NM_191984.1| Oryza sativa (japonica cultivar-group), predic... 258 2e-65
3gb|AY109394.1| Zea mays CL6440_1 mRNA sequence 240 4e-60
4gb|BT016196.1| Zea mays clone Contig29 mRNA sequence 224 2e-55
5gb|AY104524.1| Zea mays PCO106907 mRNA sequence 159 1e-35
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
9ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzy... 115 2e-22
10ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzy... 115 2e-22
11gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, co... 115 2e-22
12gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, co... 115 2e-22
13gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete se... 115 2e-22
14gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g1... 115 2e-22
15emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Co... 107 4e-20
16ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzy... 100 9e-18
17ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzy... 100 9e-18
18gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugati... 100 9e-18
19gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, comp... 100 9e-18
20emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Co... 100 9e-18
21gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete s... 100 9e-18
22gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g7... 100 9e-18
23emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Co... 96 1e-16
24gb|DQ097726.1| Arachis hypogaea ubiquitin-conjugating enzyme 1 m... 92 2e-15
25ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating e... 90 9e-15
26emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Co... 90 9e-15
27gb|AF091621.1| Catharanthus roseus ubiquitin-conjugating enzyme ... 88 3e-14
28gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17... 88 3e-14
29gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I... 88 3e-14
30gb|DQ306757.1| Hevea brasiliensis isolate SSH28 mRNA sequence 82 2e-12
31dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone... 74 5e-10
32gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 ... 68 3e-08
33dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone... 68 3e-08
34gb|AF165420.1| Mesembryanthemum crystallinum ubiquitin-conjugati... 64 5e-07
35gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (... 44 0.46
36ref|XM_392901.2| PREDICTED: Apis mellifera similar to ENSANGP000... 44 0.46
37gb|AC102152.12| Mus musculus chromosome 7, clone RP23-314H9, com... 42 1.8
38gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, comp... 42 1.8
39gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome... 42 1.8
40gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome... 42 1.8
41gb|AC131697.4| Mus musculus BAC clone RP23-407K12 from 1, comple... 42 1.8
42ref|NM_001031153.1| Gallus gallus ubiquitin-conjugating enzyme E... 40 7.2
43gb|AC161751.3| Mus musculus BAC clone RP24-525E22 from chromosom... 40 7.2
44gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, c... 40 7.2
45gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.2
46gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome... 40 7.2
47gb|DQ160084.1| Taraxacum officinale TO71-1 (To71-1) mRNA, partia... 40 7.2
48gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosom... 40 7.2
49gb|BC043757.1| Xenopus laevis hypothetical protein MGC52908, mRN... 40 7.2
50emb|CR652017.2|CNS0F22F Tetraodon nigroviridis full-length cDNA 40 7.2
51emb|CR651319.2|CNS0F1J1 Tetraodon nigroviridis full-length cDNA 40 7.2
52emb|AL354863.29| Human DNA sequence from clone RP11-245J24 on ch... 40 7.2
53gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome... 40 7.2
54emb|AL670928.7| Mouse DNA sequence from clone RP23-459G6 on chro... 40 7.2
55emb|AJ719875.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.2
56gb|DQ399457.1| Ictalurus punctatus clone SND02A cysteine and gly... 40 7.2
57gb|AE002160.2| Chlamydia muridarum Nigg, complete genome 40 7.2
58dbj|AK174260.1| Ciona intestinalis cDNA, clone:cicl015i02, full ... 40 7.2
59gb|BC110944.1| Xenopus laevis cDNA clone MGC:132133 IMAGE:663800... 40 7.2
60emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chr... 40 7.2 
>dbj|AK122067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D10, full
           insert sequence
          Length = 893

 Score =  285 bits (144), Expect = 7e-74
 Identities = 272/313 (86%), Gaps = 3/313 (0%)
 Strand = Plus / Minus

                                                                       
Query: 207 atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 266
           ||||||||||||||||| | ||| ||||||||| | ||||   |||||||| |||| |||
Sbjct: 699 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 642

                                                                       
Query: 267 ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 326
           ||||||||||| |||  |||| ||||| | ||||||| ||||| ||||| || |||||||
Sbjct: 641 ttattacatcacgagaggcattgggtttt-atgcaccgctggcatacaggcgagtccact 583

                                                                       
Query: 327 ccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcag 386
           |||| |||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||
Sbjct: 582 cctttgctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcag 523

                                                                       
Query: 387 agagagggtcatctggatttggtgcacttaagagtgcctggatactnaaaagaactgttc 446
           ||||||| ||||| || ||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct: 522 agagaggatcatcagggtttggtgcacttaggagtgcctggatactcaaaagaactgtcc 463

                                                                       
Query: 447 naatntgaagagccggactncatttatncttganaatgtcaaggcatatcctaccaagct 506
            ||| ||||| || || || ||||| | ||||| ||||||||||||||||||||||||||
Sbjct: 462 gaatctgaagggctgggctccatttgtccttgagaatgtcaaggcatatcctaccaagct 403

                        
Query: 507 tgncaatgttggg 519
           || ||||||||||
Sbjct: 402 tgtcaatgttggg 390



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 112 ggtgccccagggtaaagggaaccaacca 139
           ||||||| ||||||||||||||||||||
Sbjct: 785 ggtgccctagggtaaagggaaccaacca 758
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>ref|NM_191984.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 462

 Score =  258 bits (130), Expect = 2e-65
 Identities = 198/223 (88%)
 Strand = Plus / Minus

                                                                       
Query: 297 atgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcat 356
           ||||||| ||||| ||||| || ||||||||||| |||||||||||||||||||| ||||
Sbjct: 460 atgcaccgctggcatacaggcgagtccactcctttgctgtttcaacagcttctgcttcat 401

                                                                       
Query: 357 tggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcactta 416
           ||| |||||||||||| |||||||| ||||||||||| ||||| || |||||||||||||
Sbjct: 400 tggctttccagtgctttgcaatgttatcagagagaggatcatcagggtttggtgcactta 341

                                                                       
Query: 417 agagtgcctggatactnaaaagaactgttcnaatntgaagagccggactncatttatnct 476
            ||||||||||||||| ||||||||||| | ||| ||||| || || || ||||| | ||
Sbjct: 340 ggagtgcctggatactcaaaagaactgtccgaatctgaagggctgggctccatttgtcct 281

                                                      
Query: 477 tganaatgtcaaggcatatcctaccaagcttgncaatgttggg 519
           ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 280 tgagaatgtcaaggcatatcctaccaagcttgtcaatgttggg 238
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>gb|AY109394.1| Zea mays CL6440_1 mRNA sequence
          Length = 1225

 Score =  240 bits (121), Expect = 4e-60
 Identities = 228/266 (85%)
 Strand = Plus / Minus

                                                                       
Query: 255 aagtatgatgggttattacatcaagagcagcatggggttgtcatgcaccactggcgtaca 314
           |||||||||||||||||||||||||| || ||  | ||| ||||||||| || || ||||
Sbjct: 650 aagtatgatgggttattacatcaagaacatcactgcgttctcatgcaccgctcgcataca 591

                                                                       
Query: 315 gacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttgg 374
           | || ||||||||||| |||||||||||||||||| ||||||||| |||||||||||| |
Sbjct: 590 ggcgagtccactccttagctgtttcaacagcttctacctcattggctttccagtgctttg 531

                                                                       
Query: 375 caatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactna 434
           ||||||| || || |||||||| ||||||||||| ||||| |  || ||||| ||||| |
Sbjct: 530 caatgttatccgaaagagggtcgtctggatttggcgcactcagtagagcctgtatactca 471

                                                                       
Query: 435 aaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcata 494
           |||||||||||| ||| ||||| || || || ||||| | ||||| |||||| |||||||
Sbjct: 470 aaagaactgttcgaatctgaagtgctgggctccatttgtccttgagaatgtcgaggcata 411

                                     
Query: 495 tcctaccaagcttgncaatgttggga 520
           |||||||||||||| | |||||||||
Sbjct: 410 tcctaccaagcttgtcgatgttggga 385



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/48 (89%), Gaps = 3/48 (6%)
 Strand = Plus / Minus

                                                           
Query: 110 aaggtgccccagggtaaagggaaccaaccaacacaggtgtacaaccaa 157
           ||||||||||| ||||||||||||| ||   |||||||||||||||||
Sbjct: 788 aaggtgccccaaggtaaagggaaccgac---cacaggtgtacaaccaa 744
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>gb|BT016196.1| Zea mays clone Contig29 mRNA sequence
          Length = 537

 Score =  224 bits (113), Expect = 2e-55
 Identities = 226/266 (84%)
 Strand = Plus / Plus

                                                                       
Query: 255 aagtatgatgggttattacatcaagagcagcatggggttgtcatgcaccactggcgtaca 314
           |||||||||||||||||||||||||| || ||  | ||| ||||||||| || || ||||
Sbjct: 254 aagtatgatgggttattacatcaagaacatcactgcgttctcatgcaccgctcgcataca 313

                                                                       
Query: 315 gacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttgg 374
           | || ||||||||||| |||||||||||||||||| ||||||||| ||||||| |||| |
Sbjct: 314 ggcgagtccactccttagctgtttcaacagcttctacctcattggctttccagggctttg 373

                                                                       
Query: 375 caatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactna 434
           ||||||| || || |||||||  ||||||||||| ||||| |  || ||||| ||||| |
Sbjct: 374 caatgttatccgaaagagggtagtctggatttggcgcactcagtagagcctgtatactca 433

                                                                       
Query: 435 aaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcata 494
           |||||||||||| ||| ||||| || || || ||||| | ||||| |||||| |||||||
Sbjct: 434 aaagaactgttcgaatctgaagggctgggctccatttgtccttgagaatgtcgaggcata 493

                                     
Query: 495 tcctaccaagcttgncaatgttggga 520
           |||||||||||||| | |||||||||
Sbjct: 494 tcctaccaagcttgtcgatgttggga 519



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 43/48 (89%), Gaps = 3/48 (6%)
 Strand = Plus / Plus

                                                           
Query: 110 aaggtgccccagggtaaagggaaccaaccaacacaggtgtacaaccaa 157
           ||||||||||| ||||||||||||| ||   |||||||||||||||||
Sbjct: 116 aaggtgccccaaggtaaagggaaccgac---cacaggtgtacaaccaa 160
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>gb|AY104524.1| Zea mays PCO106907 mRNA sequence
          Length = 780

 Score =  159 bits (80), Expect = 1e-35
 Identities = 184/221 (83%)
 Strand = Plus / Minus

                                                                       
Query: 293 tgtcatgcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcc 352
           |||||||| ||||| | |||||| || ||||||||||||||||| ||||||||||| || 
Sbjct: 561 tgtcatgccccacttgtgtacaggcgagtccactccttcgctgtctcaacagcttcagct 502

                                                                       
Query: 353 tcattggatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgca 412
           || |||||||||||||| || |||||||| || |||||||| |||||||| ||||| || 
Sbjct: 501 tcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttggggcg 442

                                                                       
Query: 413 cttaagagtgcctggatactnaaaagaactgttcnaatntgaagagccggactncattta 472
           || |  |||||||| || || |  |||||||| |  || |||||||| ||||| ||||| 
Sbjct: 441 ctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatttg 382

                                                    
Query: 473 tncttganaatgtcaaggcatatcctaccaagcttgncaat 513
           | ||| | |||||| ||||||||||||||||||||| ||||
Sbjct: 381 tccttaagaatgtcgaggcatatcctaccaagcttgtcaat 341
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 1e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                            
Query: 333      ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
                ||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 27662251 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 27662310

                                                             
Query: 393      ggtcatctggatttggtgcacttaagagtgcctggatactnaaaa 437
                | ||||| || ||||||||||||| ||||||||||||||| ||||
Sbjct: 27662311 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 27662355



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                            
Query: 434      aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
                ||||||||||| | ||| ||||| || || || ||||| | ||||| |||||||||||||
Sbjct: 27662610 aaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaaggcat 27662669

                             
Query: 494      atcctaccaagct 506
                |||||||||||||
Sbjct: 27662670 atcctaccaagct 27662682



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/129 (83%), Gaps = 3/129 (2%)
 Strand = Plus / Plus

                                                                            
Query: 207      atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 266
                ||||||||||||||||| | ||| ||||||||| | ||||   |||||||| |||| |||
Sbjct: 27662037 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 27662094

                                                                            
Query: 267      ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 326
                ||||||||||| |||  |||| ||||| | ||||||| ||||| ||||| || |||||||
Sbjct: 27662095 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 27662153

                         
Query: 327      ccttcgctg 335
                |||| ||||
Sbjct: 27662154 cctttgctg 27662162



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 112      ggtgccccagggtaaagggaaccaacca 139
                ||||||| ||||||||||||||||||||
Sbjct: 27661951 ggtgccctagggtaaagggaaccaacca 27661978
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>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485G01
          Length = 167203

 Score =  139 bits (70), Expect = 1e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                         
Query: 333   ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
             ||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 70817 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 70876

                                                          
Query: 393   ggtcatctggatttggtgcacttaagagtgcctggatactnaaaa 437
             | ||||| || ||||||||||||| ||||||||||||||| ||||
Sbjct: 70877 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 70921



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 434   aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
             ||||||||||| | ||| ||||| || || || ||||| | ||||| |||||||||||||
Sbjct: 71176 aaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaaggcat 71235

                          
Query: 494   atcctaccaagct 506
             |||||||||||||
Sbjct: 71236 atcctaccaagct 71248



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/129 (83%), Gaps = 3/129 (2%)
 Strand = Plus / Plus

                                                                         
Query: 207   atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 266
             ||||||||||||||||| | ||| ||||||||| | ||||   |||||||| |||| |||
Sbjct: 70603 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 70660

                                                                         
Query: 267   ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 326
             ||||||||||| |||  |||| ||||| | ||||||| ||||| ||||| || |||||||
Sbjct: 70661 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 70719

                      
Query: 327   ccttcgctg 335
             |||| ||||
Sbjct: 70720 cctttgctg 70728



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 112   ggtgccccagggtaaagggaaccaacca 139
             ||||||| ||||||||||||||||||||
Sbjct: 70517 ggtgccctagggtaaagggaaccaacca 70544
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>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0007F06
          Length = 150817

 Score =  139 bits (70), Expect = 1e-29
 Identities = 96/105 (91%)
 Strand = Plus / Plus

                                                                          
Query: 333    ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
              ||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 129545 ctgtttcaacagcttctgcttcattggctttccagtgctttgcaatgttatcagagagag 129604

                                                           
Query: 393    ggtcatctggatttggtgcacttaagagtgcctggatactnaaaa 437
              | ||||| || ||||||||||||| ||||||||||||||| ||||
Sbjct: 129605 gatcatcagggtttggtgcacttaggagtgcctggatactgaaaa 129649



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                          
Query: 434    aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
              ||||||||||| | ||| ||||| || || || ||||| | ||||| |||||||||||||
Sbjct: 129904 aaaagaactgtccgaatctgaagggctgggctccatttgtccttgagaatgtcaaggcat 129963

                           
Query: 494    atcctaccaagct 506
              |||||||||||||
Sbjct: 129964 atcctaccaagct 129976



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 108/129 (83%), Gaps = 3/129 (2%)
 Strand = Plus / Plus

                                                                          
Query: 207    atctccagtttgttctttaccaaccaaatggcactagattgctggctaaagtatgatggg 266
              ||||||||||||||||| | ||| ||||||||| | ||||   |||||||| |||| |||
Sbjct: 129331 atctccagtttgttctt-atcaagcaaatggcatttgattaa-ggctaaagcatgacggg 129388

                                                                          
Query: 267    ttattacatcaagagcagcatggggttgtcatgcaccactggcgtacagacgggtccact 326
              ||||||||||| |||  |||| ||||| | ||||||| ||||| ||||| || |||||||
Sbjct: 129389 ttattacatcacgagaggcattgggtt-ttatgcaccgctggcatacaggcgagtccact 129447

                       
Query: 327    ccttcgctg 335
              |||| ||||
Sbjct: 129448 cctttgctg 129456



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 112    ggtgccccagggtaaagggaaccaacca 139
              ||||||| ||||||||||||||||||||
Sbjct: 129245 ggtgccctagggtaaagggaaccaacca 129272
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>ref|NM_179347.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G16890 transcript variant
           AT1G16890.1 mRNA, complete cds
          Length = 804

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 596 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 537

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 536 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 477

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 476 agagcttggatact 463
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>ref|NM_101550.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G16890 transcript variant
           AT1G16890.2 mRNA, complete cds
          Length = 794

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 586 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 527

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 526 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 467

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 466 agagcttggatact 453
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>gb|AY061926.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
          Length = 462

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 458 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 399

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 398 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 339

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 338 agagcttggatact 325
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>gb|AY052307.1| Arabidopsis thaliana At1g16890/F17F16.16 mRNA, complete cds
          Length = 751

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 556 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 497

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 496 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 437

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 436 agagcttggatact 423
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>gb|AY086780.1| Arabidopsis thaliana clone 2763 mRNA, complete sequence
          Length = 795

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 587 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 528

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 527 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 468

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 467 agagcttggatact 454
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>gb|DQ027049.1| Arabidopsis thaliana ubiquitinating enzyme (At1g16890) mRNA,
           complete cds
          Length = 462

 Score =  115 bits (58), Expect = 2e-22
 Identities = 115/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||||||| ||||| ||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 458 gcaccacttgcgtaaagacgagtccattccttagctgtttccacagcttctgcctcattg 399

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||| 
Sbjct: 398 ctcttccaatgcttagctatgttctcagacagaggatcatctgggtttggtgcacttaaa 339

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 338 agagcttggatact 325
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>emb|BX813701.1|CNS0AEIF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB34ZF06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 745

 Score =  107 bits (54), Expect = 4e-20
 Identities = 114/134 (85%)
 Strand = Plus / Minus

                                                                       
Query: 299 gcaccactggcgtacagacgggtccactccttcgctgtttcaacagcttctgcctcattg 358
           |||| ||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 555 gcacaacttgcgtaaagacgagtccattccttcgctgtttccacagcttctgcctcattg 496

                                                                       
Query: 359 gatttccagtgcttggcaatgttttcagagagagggtcatctggatttggtgcacttaag 418
              ||||| ||||| || ||||  | ||||||||| |||||||| |||||||||||||| 
Sbjct: 495 ctcttccaatgcttagctatgtgctgagagagaggatcatctgggtttggtgcacttaaa 436

                         
Query: 419 agtgcctggatact 432
           || || ||||||||
Sbjct: 435 agagcttggatact 422
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>ref|NM_179571.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G78870 transcript variant
           AT1G78870.1 mRNA, complete cds
          Length = 905

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 572 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 513

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 512 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 453

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 452 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 393

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 392 attcttccaagcttgtcaatgtt 370
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>ref|NM_106535.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G78870 transcript variant
           AT1G78870.2 mRNA, complete cds
          Length = 909

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 576 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 517

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 516 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 457

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 456 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 397

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 396 attcttccaagcttgtcaatgtt 374
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>gb|BT000544.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2
           (At1g78870/F9K20_8) mRNA, complete cds
          Length = 462

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 443 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 384

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 383 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 324

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 323 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 264

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 263 attcttccaagcttgtcaatgtt 241
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>gb|AY049261.1| Arabidopsis thaliana At1g78870/F9K20_8 mRNA, complete cds
          Length = 757

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 553 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 494

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 493 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 434

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 433 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 374

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 373 attcttccaagcttgtcaatgtt 351
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>emb|BX814646.1|CNS0AC4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB86ZH05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 515

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 294 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 235

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 234 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 175

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 174 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 115

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 114 attcttccaagcttgtcaatgtt 92
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>gb|AY085854.1| Arabidopsis thaliana clone 19071 mRNA, complete sequence
          Length = 778

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 576 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 517

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 516 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 457

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 456 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 397

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 396 attcttccaagcttgtcaatgtt 374
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>gb|DQ027048.1| Arabidopsis thaliana ubiquitinating enzyme (At1g78870) mRNA,
           complete cds
          Length = 462

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 163/203 (80%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 443 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 384

                                                                       
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactn 433
           |||||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| 
Sbjct: 383 gcaatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatactt 324

                                                                       
Query: 434 aaaagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcat 493
           || || |||||||  || || || || || || ||||| | ||||| ||| ||||| || 
Sbjct: 323 aagagcactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacag 264

                                  
Query: 494 atcctaccaagcttgncaatgtt 516
           || || ||||||||| |||||||
Sbjct: 263 attcttccaagcttgtcaatgtt 241
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>emb|BX814028.1|CNS0AE9U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB52ZH04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 803

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 161/201 (80%)
 Strand = Plus / Minus

                                                                       
Query: 316 acgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggc 375
           ||||||||| ||||| ||||| || || ||||||||||||||    ||||||||||| ||
Sbjct: 559 acgggtccattccttagctgtatccaccgcttctgcctcattactcttccagtgcttagc 500

                                                                       
Query: 376 aatgttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactnaa 435
           |||||| ||||| || || |||||||| ||||||||||| |  || || || ||||| ||
Sbjct: 499 aatgttctcagaaagcggatcatctgggtttggtgcactcagaagagcttgaatacttaa 440

                                                                       
Query: 436 aagaactgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcatat 495
            ||||||||||  || || || || || || ||||| | ||||| ||| ||||| || ||
Sbjct: 439 gagaactgttcgtatttgtagtgcagggctccatttgtccttgagaatatcaagacagat 380

                                
Query: 496 cctaccaagcttgncaatgtt 516
            || ||||||||| |||||||
Sbjct: 379 tcttccaagcttgtcaatgtt 359
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>gb|DQ097726.1| Arachis hypogaea ubiquitin-conjugating enzyme 1 mRNA, complete cds
          Length = 700

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 151/188 (80%)
 Strand = Plus / Minus

                                                                       
Query: 320 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 379
           ||||| |||||||| ||||||||||| || ||||| ||   |||||| ||||||||||||
Sbjct: 558 gtccattccttcgcagtttcaacagcctcggcctcgttacttttccaatgcttggcaatg 499

                                                                       
Query: 380 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactnaaaaga 439
           || ||||| || || |||||||| ||||||||||| || || ||||||||||| || || 
Sbjct: 498 ttctcagatagtggatcatctgggtttggtgcactcaacagagcctggatactcaagagt 439

                                                                       
Query: 440 actgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcatatccta 499
           || || |  || ||||| || || || || ||||  || | ||| ||||| |||||||| 
Sbjct: 438 acagtgcgtatctgaagggcagggctccacttatctttcagaatatcaagacatatcctg 379

                   
Query: 500 ccaagctt 507
           ||||||||
Sbjct: 378 ccaagctt 371
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>ref|NM_001036221.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G78870 transcript variant
           AT1G78870.3 mRNA, complete cds
          Length = 1013

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                       
Query: 314 agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
           ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 680 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 621

                                                    
Query: 374 gcaatgttttcagagagagggtcatctggatttggtgcact 414
           |||||||| ||||| || || |||||||| |||||||||||
Sbjct: 620 gcaatgttctcagaaagcggatcatctgggtttggtgcact 580
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>emb|BX813418.1|CNS0ACA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB16ZE06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1385

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 87/101 (86%)
 Strand = Plus / Minus

                                                                        
Query: 314  agacgggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttg 373
            ||||||||||| ||||| ||||| || |||||||||||||||||    ||||||||||| 
Sbjct: 1212 agacgggtccattccttagctgtatccacagcttctgcctcattactcttccagtgctta 1153

                                                     
Query: 374  gcaatgttttcagagagagggtcatctggatttggtgcact 414
            |||||||| ||||| || || |||||||| |||||||||||
Sbjct: 1152 gcaatgttctcagaaagcggatcatctgggtttggtgcact 1112
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>gb|AF091621.1| Catharanthus roseus ubiquitin-conjugating enzyme E2 (UBIE2) mRNA,
           complete cds
          Length = 794

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 157/197 (79%)
 Strand = Plus / Minus

                                                                       
Query: 320 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 379
           ||||| ||||| |||||||||||||| || |||||||| || ||||| || || ||||||
Sbjct: 524 gtccattcctttgctgtttcaacagcctcagcctcatttgacttccaatgtttagcaatg 465

                                                                       
Query: 380 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactnaaaaga 439
           || ||||| || ||||||||||||||||| ||||| |  || || ||||| || |  |  
Sbjct: 464 ttctcagaaagtgggtcatctggatttggagcactaagaagagcttggatgcttagcaat 405

                                                                       
Query: 440 actgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcatatccta 499
           || ||||  || || || || ||||| ||||| |  |||| |||||||||||||||||| 
Sbjct: 404 acggttcgtatctggagtgctggactccatttgtctttgagaatgtcaaggcatatcctt 345

                            
Query: 500 ccaagcttgncaatgtt 516
           || || ||| |||||||
Sbjct: 344 cccagtttgtcaatgtt 328
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>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete
             sequence
          Length = 90498

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 333   ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
             ||||||| ||||||||||||||||||   ||||| ||||| || ||||| ||||| ||||
Sbjct: 24249 ctgtttccacagcttctgcctcattgctcttccaatgcttagctatgttctcagacagag 24190

                                                     
Query: 393   ggtcatctggatttggtgcacttaagagtgcctggatact 432
             | |||||||| |||||||||||||| || || ||||||||
Sbjct: 24189 gatcatctgggtttggtgcacttaaaagagcttggatact 24150
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>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete
             sequence
          Length = 93677

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 333   ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
             ||||||| ||||||||||||||||||   ||||| ||||| || ||||| ||||| ||||
Sbjct: 70946 ctgtttccacagcttctgcctcattgctcttccaatgcttagctatgttctcagacagag 70887

                                                     
Query: 393   ggtcatctggatttggtgcacttaagagtgcctggatact 432
             | |||||||| |||||||||||||| || || ||||||||
Sbjct: 70886 gatcatctgggtttggtgcacttaaaagagcttggatact 70847
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>gb|DQ306757.1| Hevea brasiliensis isolate SSH28 mRNA sequence
          Length = 413

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 100/120 (83%)
 Strand = Plus / Plus

                                                                       
Query: 319 ggtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaat 378
           |||||| ||||| ||||| ||||||||||| |||||||| | |||||| ||||| |||||
Sbjct: 293 ggtccattcctttgctgtctcaacagcttcagcctcattcgttttccaatgctttgcaat 352

                                                                       
Query: 379 gttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactnaaaag 438
           ||| ||||| || || ||||| || ||||| ||||| |  ||||| |||||||| |||||
Sbjct: 353 gttctcagaaagtggatcatcagggtttggagcactaagaagtgcttggatactcaaaag 412
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>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b,
             complete sequence
          Length = 92724

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Plus

                                                                         
Query: 333   ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
             ||||||||||||| || |||||||| |||||||| |||||||||||||| ||||| || |
Sbjct: 15235 ctgtttcaacagcctcggcctcattagatttccaatgcttggcaatgttctcagaaagtg 15294

                                      
Query: 393   ggtcatctggatttggtgcacttaa 417
             | ||||| || || || ||||||||
Sbjct: 15295 gatcatcagggttaggcgcacttaa 15319
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>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence
          Length = 90425

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 341   acagcttctgcctcattggatttccagtgcttggcaatgttttcagagagagggtcatct 400
             |||||||||||||||||    ||||||||||| |||||||| ||||| || || ||||||
Sbjct: 25851 acagcttctgcctcattactcttccagtgcttagcaatgttctcagaaagcggatcatct 25910

                           
Query: 401   ggatttggtgcact 414
             || |||||||||||
Sbjct: 25911 gggtttggtgcact 25924
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>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340,
             complete sequence
          Length = 120480

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                         
Query: 333   ctgtttcaacagcttctgcctcattggatttccagtgcttggcaatgttttcagagagag 392
             ||||||||||||| ||  ||||||| || ||||| |||||||||||||| ||||| || |
Sbjct: 95963 ctgtttcaacagcctcgacctcattagacttccaatgcttggcaatgttctcagaaagtg 96022

                                   
Query: 393   ggtcatctggatttggtgcact 414
             | ||||| || |||||||||||
Sbjct: 96023 gatcatcagggtttggtgcact 96044
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>gb|AF165420.1| Mesembryanthemum crystallinum ubiquitin-conjugating enzyme (Ubc1)
           mRNA, partial cds
          Length = 556

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 154/197 (78%)
 Strand = Plus / Minus

                                                                       
Query: 320 gtccactccttcgctgtttcaacagcttctgcctcattggatttccagtgcttggcaatg 379
           ||||| ||||| |||||||| ||||||||  | ||||| |  ||||| ||||| ||||||
Sbjct: 247 gtccattcctttgctgtttccacagcttcgacttcattagtcttccaatgctttgcaatg 188

                                                                       
Query: 380 ttttcagagagagggtcatctggatttggtgcacttaagagtgcctggatactnaaaaga 439
           ||||| || || || ||||||||||| || ||||| || || || || || || || || 
Sbjct: 187 ttttctgaaaggggatcatctggattgggggcactcaaaagagcttgaatgctcaatagt 128

                                                                       
Query: 440 actgttcnaatntgaagagccggactncatttatncttganaatgtcaaggcatatccta 499
           || ||||  || || ||||| || || |||||||  || | |||||| |||||||| || 
Sbjct: 127 acggttcggatctgcagagctgggctccatttatctttaagaatgtctaggcatattctt 68

                            
Query: 500 ccaagcttgncaatgtt 516
           ||||||||  |||||||
Sbjct: 67  ccaagcttatcaatgtt 51
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>gb|AY135219.1| Pavlova lutheri ubiquitin-conjugating enzyme E2 (ubc1) mRNA,
           complete cds
          Length = 654

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 51/62 (82%)
 Strand = Plus / Minus

                                                                       
Query: 458 gccggactncatttatncttganaatgtcaaggcatatcctaccaagcttgncaatgttg 517
           |||||||| || || | ||||| |||||||||||| || |  || |||||| ||||||||
Sbjct: 342 gccggactccacttgtccttgagaatgtcaaggcagattcggccgagcttgtcaatgttg 283

             
Query: 518 gg 519
           ||
Sbjct: 282 gg 281
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>ref|XM_392901.2| PREDICTED: Apis mellifera similar to ENSANGP00000010475
           (LOC409386), mRNA
          Length = 1196

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 395 tcatctggatttggtgcactta 416
           ||||||||||||||||||||||
Sbjct: 651 tcatctggatttggtgcactta 630
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>gb|AC102152.12| Mus musculus chromosome 7, clone RP23-314H9, complete sequence
          Length = 206923

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     tgtactggagcatagaaagtt 87
              |||||||||||||||||||||
Sbjct: 205874 tgtactggagcatagaaagtt 205854
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>gb|AC163898.5| Mus musculus chromosome 7, clone RP24-108A5, complete sequence
          Length = 143726

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    tgtactggagcatagaaagtt 87
             |||||||||||||||||||||
Sbjct: 54582 tgtactggagcatagaaagtt 54562
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>gb|AC155255.3| Mus musculus BAC clone RP24-143P3 from chromosome 12, complete
            sequence
          Length = 201217

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 67   tgtactggagcatagaaagtt 87
            |||||||||||||||||||||
Sbjct: 8608 tgtactggagcatagaaagtt 8588
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>gb|AC155311.2| Mus musculus BAC clone RP23-407F7 from chromosome 12, complete sequence
          Length = 166104

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    tgtactggagcatagaaagtt 87
             |||||||||||||||||||||
Sbjct: 12657 tgtactggagcatagaaagtt 12677
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>gb|AC131697.4| Mus musculus BAC clone RP23-407K12 from 1, complete sequence
          Length = 199589

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 67    tgtactggagcatagaaagtt 87
             |||||||||||||||||||||
Sbjct: 84488 tgtactggagcatagaaagtt 84508
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>ref|NM_001031153.1| Gallus gallus ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog,
           yeast) (UBE2D3), mRNA
          Length = 1961

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 agagggtcatctggatttgg 408
           ||||||||||||||||||||
Sbjct: 427 agagggtcatctggatttgg 408
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>gb|AC161751.3| Mus musculus BAC clone RP24-525E22 from chromosome y, complete sequence
          Length = 188482

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    tcatttagatacttccttcc 197
              ||||||||||||||||||||
Sbjct: 102703 tcatttagatacttccttcc 102722
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>gb|AC027184.15| Mus musculus chromosome 14, clone RP23-138C14, complete sequence
          Length = 196806

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    catctccagtttgttcttta 225
              ||||||||||||||||||||
Sbjct: 191141 catctccagtttgttcttta 191122
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>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete
              sequence
          Length = 213181

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    tccagtttgttctttaccaa 229
              ||||||||||||||||||||
Sbjct: 174244 tccagtttgttctttaccaa 174263
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>gb|AC157994.2| Mus musculus BAC clone RP24-349B6 from chromosome 9, complete sequence
          Length = 226187

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   acatctccagtttgttcttt 224
             ||||||||||||||||||||
Sbjct: 80887 acatctccagtttgttcttt 80868
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>gb|DQ160084.1| Taraxacum officinale TO71-1 (To71-1) mRNA, partial cds
          Length = 260

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 497 ctaccaagcttgncaatgttggg 519
           |||||||||||| ||||||||||
Sbjct: 240 ctaccaagcttgtcaatgttggg 218
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>gb|AC114824.5| Mus musculus BAC clone RP23-342J11 from chromosome 17, complete
             sequence
          Length = 216044

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   ttttcagagagagggtcatc 399
             ||||||||||||||||||||
Sbjct: 53093 ttttcagagagagggtcatc 53074
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>gb|BC043757.1| Xenopus laevis hypothetical protein MGC52908, mRNA (cDNA clone
           MGC:52908 IMAGE:4889409), complete cds
          Length = 1931

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 396 catctggatttggtgcactt 415
           ||||||||||||||||||||
Sbjct: 659 catctggatttggtgcactt 640
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>emb|CR652017.2|CNS0F22F Tetraodon nigroviridis full-length cDNA
          Length = 811

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 caaacatctccagtttgttc 221
           ||||||||||||||||||||
Sbjct: 506 caaacatctccagtttgttc 525
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>emb|CR651319.2|CNS0F1J1 Tetraodon nigroviridis full-length cDNA
          Length = 747

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 caaacatctccagtttgttc 221
           ||||||||||||||||||||
Sbjct: 456 caaacatctccagtttgttc 475
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>emb|AL354863.29| Human DNA sequence from clone RP11-245J24 on chromosome 10 Contains a
            novel gene, complete sequence
          Length = 46765

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 190  ttccttccagcccaaacatctcca 213
            |||||||||||||||||| |||||
Sbjct: 6622 ttccttccagcccaaacaactcca 6599
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>gb|AC140280.3| Mus musculus BAC clone RP23-345I5 from chromosome 14, complete sequence
          Length = 205109

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    catctccagtttgttcttta 225
              ||||||||||||||||||||
Sbjct: 162402 catctccagtttgttcttta 162421
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>emb|AL670928.7| Mouse DNA sequence from clone RP23-459G6 on chromosome 4, complete
             sequence
          Length = 125713

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   caaacatctccagtttgttc 221
             ||||||||||||||||||||
Sbjct: 69797 caaacatctccagtttgttc 69816
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>emb|AJ719875.1| Gallus gallus mRNA for hypothetical protein, clone 7i20
          Length = 1990

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 agagggtcatctggatttgg 408
           ||||||||||||||||||||
Sbjct: 427 agagggtcatctggatttgg 408
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>gb|DQ399457.1| Ictalurus punctatus clone SND02A cysteine and glycine-rich protein
           1 mRNA, partial cds
          Length = 276

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 tacatcaagagcagcatggg 290
           ||||||||||||||||||||
Sbjct: 238 tacatcaagagcagcatggg 257
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>gb|AE002160.2| Chlamydia muridarum Nigg, complete genome
          Length = 1072950

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 385     agagagagggtcatctggatttgg 408
               |||||||||||| |||||||||||
Sbjct: 1039031 agagagagggtcttctggatttgg 1039054
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>dbj|AK174260.1| Ciona intestinalis cDNA, clone:cicl015i02, full insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 389 agagggtcatctggatttgg 408
           ||||||||||||||||||||
Sbjct: 453 agagggtcatctggatttgg 434
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>gb|BC110944.1| Xenopus laevis cDNA clone MGC:132133 IMAGE:6638005, complete cds
          Length = 1954

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 396 catctggatttggtgcactt 415
           ||||||||||||||||||||
Sbjct: 670 catctggatttggtgcactt 651
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>emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chromosome 4, complete
            sequence
          Length = 170162

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   atagaaagttctatcagata 97
            ||||||||||||||||||||
Sbjct: 7501 atagaaagttctatcagata 7482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,947,719
Number of Sequences: 3902068
Number of extensions: 3947719
Number of successful extensions: 72802
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72658
Number of HSP's gapped (non-prelim): 124
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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