ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal31m22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence Length = 1189 Score = 315 bits (159), Expect = 9e-83 Identities = 267/303 (88%) Strand = Plus / Plus Query: 289 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 348 ||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||| | Sbjct: 325 tcctcatcctggtgagcaaacttcttgcgcaacaccttctcaaactcaatcttttcaaga 384 Query: 349 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 408 ||||||||||||||| |||| || ||||||| | |||||||||||||||| |||||| Sbjct: 385 ggcttggcattctcatcagcatgcgccttggacagactggaatagttggcagctgactcc 444 Query: 409 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 468 || |||||||| ||||| |||||||||||||||||||||||||| || ||||| |||||| Sbjct: 445 gcaataaaagcgatctcgtcatctgtgagcttcctcagaaatttggcggggttcccaccc 504 Query: 469 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 528 ||||||||||||||||||||||| |||||||||| ||| |||||||| ||||| |||||| Sbjct: 505 catacctctccacaagggatcctagtattctgtcgtacgagggctccagcagctaccatc 564 Query: 529 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 588 || |||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 565 ccgtgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagcctca 624 Query: 589 tcc 591 ||| Sbjct: 625 tcc 627 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 60 gaagtgcatggtcagctttagaacattgctcgacccaaaattattg 105 ||||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 89 gaagtgcatggccagctttataacatcgctcgacccaagattattg 134
>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence Length = 1060 Score = 276 bits (139), Expect = 8e-71 Identities = 262/303 (86%) Strand = Plus / Minus Query: 289 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacg 348 ||||| ||||||||||||| ||||| || ||||| |||||||| ||||||||||| | Sbjct: 800 tcctcatcctggtgagcaaacttcttgcgtaacaccttctcaaactcaatcttttcaaga 741 Query: 349 ggcttggcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactcc 408 |||||||||||||| |||| || |||||| | ||||||||||||| ||| || ||| Sbjct: 740 ggcttggcattctcggcagcatgcaccttggacagattggaatagttggaagctgattcc 681 Query: 409 gctataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccc 468 | ||||| || ||||| |||||||||||||||||||||||||| || ||||| || ||| Sbjct: 680 gtgataaatgcgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccc 621 Query: 469 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 528 ||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||| Sbjct: 620 catacctctccacaagggatcctagtattctgtcttacaagggatcctgcagctaccatc 561 Query: 529 ccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttca 588 ||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 560 ccatgcttttcaacaacgacaccatctaatagggttgcccccatgccaacaaaagcctca 501 Query: 589 tcc 591 ||| Sbjct: 500 tcc 498 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 60 gaagtgcatggtcagctttagaacattgctcgacccaaaattattg 105 ||||||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 1035 gaagtgcatggccagctttataacatcgctcgacccaagattattg 990
>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full insert sequence Length = 1036 Score = 274 bits (138), Expect = 3e-70 Identities = 297/350 (84%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 872 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 813 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 812 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 753 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 752 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 693 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 692 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 633 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 632 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 573 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 || || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 572 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 523 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tgctcgacccaaaattattg 105 |||||||||||||||||||| Sbjct: 1030 tgctcgacccaaaattattg 1011
>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full insert sequence Length = 1086 Score = 274 bits (138), Expect = 3e-70 Identities = 297/350 (84%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 || || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 573 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tgctcgacccaaaattattg 105 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full insert sequence Length = 1156 Score = 274 bits (138), Expect = 3e-70 Identities = 297/350 (84%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 914 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 855 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 854 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 795 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 794 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 735 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 734 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 675 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 674 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 615 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 || || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 614 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 565 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 39 aacatatggaatacagaaactgaagtgcatggtcagctttagaacattgctcgacccaaa 98 ||||||||||||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| Sbjct: 1119 aacatatggaatacagaaaacgaagtacatggccagcttttgcacaatgctcgacccaaa 1060 Query: 99 attattg 105 ||||||| Sbjct: 1059 attattg 1053
>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full insert sequence Length = 1086 Score = 274 bits (138), Expect = 3e-70 Identities = 297/350 (84%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 922 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 863 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 862 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 803 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 802 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 743 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||||| Sbjct: 742 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacctct 683 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 682 ccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatcccatgcttt 623 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 || || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 622 tccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 573 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tgctcgacccaaaattattg 105 |||||||||||||||||||| Sbjct: 1080 tgctcgacccaaaattattg 1061
>gb|AY105930.1| Zea mays PCO135569 mRNA sequence Length = 1279 Score = 240 bits (121), Expect = 4e-60 Identities = 253/297 (85%) Strand = Plus / Minus Query: 295 tcctggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttg 354 ||||||||||||| ||||| | |||||| |||||||| ||||||||||| | || ||| Sbjct: 838 tcctggtgagcaaacttcttgcccaacaccttctcaaactcaatcttttcaagaggtttg 779 Query: 355 gcattctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctata 414 ||||||||| |||| || |||||| | ||||||||||||||||| || ||||| || Sbjct: 778 gcattctcagcagcatggaccttggacagattggaatagttggcagctgattccgcaatg 719 Query: 415 aaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacc 474 ||| ||||| |||||||||||||||||||||||||| || ||||| || ||||||||| Sbjct: 718 aaactgatctcgtcatctgtgagcttcctcagaaatttggcagggttccctccccatacc 659 Query: 475 tctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgc 534 ||||||||||||||||| |||||||| | ||| |||||||| ||||| ||||| || ||| Sbjct: 658 tctccacaagggatcctagtattctgccgtacgagggctccagcagccaccattccgtgc 599 Query: 535 ttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 ||||| ||||||||||||||||| |||||||| || || ||||||||||| |||||| Sbjct: 598 ttttcaacaacaacaccatctaatagggttgccccaatgccaacaaaagcctcatcc 542 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 60 gaagtgcatggtcagctttagaacattgctcgacccaaaattattg 105 ||||||||||| |||||||| ||||| |||||| |||| ||||||| Sbjct: 1071 gaagtgcatggccagctttataacatcgctcgatccaagattattg 1026
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 10121038 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 10120979 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 10120978 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 10120923 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 10121590 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 10121531 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 10121530 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 10121471 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 10121470 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 10121411 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 475 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 10121410 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 10121353 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 39 aacatatggaatacagaaactgaagtgcatggtcagctttagaacattgctcgacccaaa 98 ||||||||||||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| Sbjct: 10121795 aacatatggaatacagaaaacgaagtacatggccagcttttgcacaatgctcgacccaaa 10121736 Query: 99 attattg 105 ||||||| Sbjct: 10121735 attattg 10121729 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 9481999 ctttctcaaaatcaatcttt 9482018
>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0581F09 Length = 154248 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 68507 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 68448 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 68447 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 68392 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 69059 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 69000 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 68999 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 68940 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 68939 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 68880 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 475 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 68879 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 68822 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 39 aacatatggaatacagaaactgaagtgcatggtcagctttagaacattgctcgacccaaa 98 ||||||||||||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| Sbjct: 69264 aacatatggaatacagaaaacgaagtacatggccagcttttgcacaatgctcgacccaaa 69205 Query: 99 attattg 105 ||||||| Sbjct: 69204 attattg 69198
>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004B13 Length = 142268 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 45637 acctctccacaggggatccttgtgttctgtcttacaagggctccagcagcaaccatccca 45578 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttc 587 |||||||| || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 45577 tgcttttccacgacaacaccatctaacagggtcgcccccataccaacaaatgcttc 45522 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 46189 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 46130 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 46129 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 46070 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 46069 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 46010 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 475 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 46009 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 45952 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 39 aacatatggaatacagaaactgaagtgcatggtcagctttagaacattgctcgacccaaa 98 ||||||||||||||||||| ||||| ||||| ||||||| | ||| ||||||||||||| Sbjct: 46394 aacatatggaatacagaaaacgaagtacatggccagcttttgcacaatgctcgacccaaa 46335 Query: 99 attattg 105 ||||||| Sbjct: 46334 attattg 46328
>gb|DQ284493.1| Solanum tuberosum clone 050G10 transcription factor APFI-like mRNA, complete cds Length = 1260 Score = 125 bits (63), Expect = 2e-25 Identities = 135/159 (84%) Strand = Plus / Minus Query: 432 tgtgagcttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatcct 491 ||||||||||||||||||| | ||||| ||||| ||||| |||||||||||||| ||||| Sbjct: 580 tgtgagcttcctcagaaatctagctggatttcctccccagacctctccacaaggaatcct 521 Query: 492 tgtattctgtcttacaagggctccggcagcaaccatcccatgcttttctacaacaacacc 551 |||||||| || |||||||| || || |||||||| ||| || || |||||||| || Sbjct: 520 cgtattctgcctgacaagggcaccagccgcaaccattgcatttttctccacaacaactcc 461 Query: 552 atctaacagggttgctcccataccaacaaaagcttcatc 590 ||||| ||| ||||| |||||||||||||| || ||||| Sbjct: 460 atctagcagagttgcacccataccaacaaatgcctcatc 422 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 289 tcctcgtcctggtgagcaactttcttccgcaacactttctcaaaatcaatc 339 |||||||| | | |||||| ||||||||||||||| |||||||| |||||| Sbjct: 723 tcctcgtctttgcgagcaaatttcttccgcaacaccttctcaaattcaatc 673
>ref|NM_101815.2| Arabidopsis thaliana unknown protein AT1G19580 mRNA, complete cds Length = 1357 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 773 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 714 Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 713 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 654 Query: 532 tgcttttctacaacaacaccatc 554 |||||||| ||||| || ||||| Sbjct: 653 tgcttttcaacaacgaccccatc 631
>gb|AY085025.1| Arabidopsis thaliana clone 12477 mRNA, complete sequence Length = 1337 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 775 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 716 Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 715 acctctccagaaggaattctggtgttttgtcgtacaagcgcaccagcagcaaccatccca 656 Query: 532 tgcttttctacaacaacaccatc 554 |||||||| ||||| || ||||| Sbjct: 655 tgcttttcaacaacgaccccatc 633
>dbj|AK176887.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-45-B01 Length = 1131 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 659 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 600 Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 599 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 540 Query: 532 tgcttttctacaacaacaccatc 554 |||||||| ||||| || ||||| Sbjct: 539 tgcttttcaacaacgaccccatc 517
>dbj|AK176844.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-H22 Length = 1293 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 717 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 658 Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 657 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 598 Query: 532 tgcttttctacaacaacaccatc 554 |||||||| ||||| || ||||| Sbjct: 597 tgcttttcaacaacgaccccatc 575
>dbj|AK175388.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-82-L07 Length = 1158 Score = 117 bits (59), Expect = 4e-23 Identities = 122/143 (85%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 686 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 627 Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| || || || || |||| |||||| || || ||||||||||||||| Sbjct: 626 acctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatccca 567 Query: 532 tgcttttctacaacaacaccatc 554 |||||||| ||||| || ||||| Sbjct: 566 tgcttttcaacaacgaccccatc 544
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 774 Score = 115 bits (58), Expect = 2e-22 Identities = 193/238 (81%) Strand = Plus / Minus Query: 238 ggcgccagctctggagggacttcccgagtggcaccaagcatggaaccgtgttcctcgtcc 297 |||| |||||| |||| || |||||||| ||||||| ||| ||| |||||||||| ||| Sbjct: 755 ggcgtcagctccggagtaacctcccgagtagcaccaatcattgaatcgtgttcctcatcc 696 Query: 298 tggtgagcaactttcttccgcaacactttctcaaaatcaatcttttccacgggcttggca 357 ||||||||| ||||| || |||| |||||||| ||| ||||||| || ||||||||| Sbjct: 695 tggtgagcagacttcttgcggaacagcttctcaaattcagtcttttcaacaggcttggca 636 Query: 358 ttctcaacagcgtgtgccttggctaagttggaatagttggcagccgactccgctataaaa 417 |||||| |||| || ||||| || | |||||||||| | ||| || || ||||| Sbjct: 635 ttctcagcagcatgggcctttgccagagtggaatagttagaagctgattctttgataaac 576 Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacct 475 | |||||| ||||| |||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 575 gtaatctcgtcatcagtgagcttcctcaggaatttggcagggtttcctccccatacct 518 Score = 113 bits (57), Expect = 7e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 507 aagggctccggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgc 566 ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 504 aagggctccagcagcaaccatcccatgcttttccacgacaacaccatctaacagggtcgc 445 Query: 567 tcccataccaacaaaagcttc 587 |||||||||||||| ||||| Sbjct: 444 ccccataccaacaaatgcttc 424
>gb|BT017479.1| Zea mays clone EL01N0408G09.c mRNA sequence Length = 1166 Score = 83.8 bits (42), Expect = 6e-13 Identities = 141/174 (81%) Strand = Plus / Minus Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 576 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 517 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||| |||| |||||||||||||| | ||||| | ||| ||| ||||||| | |||||| Sbjct: 516 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 457 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 456 tcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 403
>gb|AY107290.1| Zea mays PCO063868 mRNA sequence Length = 1381 Score = 83.8 bits (42), Expect = 6e-13 Identities = 141/174 (81%) Strand = Plus / Minus Query: 418 gcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctct 477 ||||||||||| ||||| |||||||| || || || || || || || |||| |||||| Sbjct: 764 gcaatctcctcttctgtaagcttccttaggaacttggcaggattaccgacccagacctct 705 Query: 478 ccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttt 537 ||| |||| |||||||||||||| | ||||| | ||| ||| ||||||| | |||||| Sbjct: 704 ccagaaggaatccttgtattctgcttaacaagagatcctgcaccaaccatgctgtgcttt 645 Query: 538 tctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 644 tcaactaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 591
>gb|BT014370.1| Lycopersicon esculentum clone 133658F, mRNA sequence Length = 1217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 128/157 (81%) Strand = Plus / Minus Query: 421 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 480 ||||| ||||| || |||||||||||||| || || || || || ||||||||||||| Sbjct: 748 atctcttcatcagttagcttcctcagaaacttagcgggattgcctgcccatacctctccg 689 Query: 481 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 540 | || |||||||| |||||| | ||||||||||| ||||||||||| |||| || ||| Sbjct: 688 gagggaatccttgtgttctgtttcacaagggctcctgcagcaaccatggcatgtttctct 629 Query: 541 acaacaacaccatctaacagggttgctcccataccaa 577 ||| ||||||||| | ||| || || |||||||||| Sbjct: 628 acatgaacaccatcaagcagtgtggcccccataccaa 592
>gb|AF249876.1|AF249876 Arabidopsis thaliana transcription factor APFI mRNA, complete cds Length = 1216 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 454 gctgggtttccaccccatacctctccacaagggatccttgtattctgtcttacaagggct 513 ||||| ||||| ||||| ||||||||| ||||||| | || |||||| | ||||| | Sbjct: 696 gctggatttcctccccacacctctccagaagggattcgcgtgttctgtttcacaagagaa 637 Query: 514 ccggcagcaaccatcccatgcttttctacaacaacaccatctaacagggttgctcccata 573 || ||||||||||| |||| || || || ||||||||||| | || |||||||||||| Sbjct: 636 ccagcagcaaccatggcatgtttctcaaccacaacaccatcaagtagtgttgctcccata 577 Query: 574 ccaacaaaagcttcatcc 591 ||||||||||| |||||| Sbjct: 576 ccaacaaaagcatcatcc 559
>gb|AC137669.12| Medicago truncatula clone mth2-27m3, complete sequence Length = 120323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccat 527 ||||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||| Sbjct: 77080 acctctccacaggggattcttgtattctgcctgacaagagctccggcagcaaccat 77135
>ref|NM_103620.2| Arabidopsis thaliana APFI AT1G47260 (APFI) mRNA, complete cds Length = 1750 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Minus Query: 421 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 480 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 727 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 668 Query: 481 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 540 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 667 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 608 Query: 541 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || |||||||| | || ||||||||||||||||||||||| |||||| Sbjct: 607 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcc 557
>gb|AY113936.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 868 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Minus Query: 421 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 480 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 590 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 531 Query: 481 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 540 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 530 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 471 Query: 541 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || |||||||| | || ||||||||||||||||||||||| |||||| Sbjct: 470 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcc 420
>gb|AY045979.1| Arabidopsis thaliana unknown protein (At1g47260) mRNA, complete cds Length = 1182 Score = 69.9 bits (35), Expect = 9e-09 Identities = 137/171 (80%) Strand = Plus / Minus Query: 421 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 480 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 696 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 637 Query: 481 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 540 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 636 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 577 Query: 541 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || |||||||| | || ||||||||||||||||||||||| |||||| Sbjct: 576 accaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcc 526
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 469 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 528 |||||||||||| |||| || || || || |||| |||||| || || |||||||||||| Sbjct: 86051 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 86110 Query: 529 ccatgcttttctacaacaacaccatc 554 ||||||||||| ||||| || ||||| Sbjct: 86111 ccatgcttttcaacaacgaccccatc 86136 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 85587 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 85646 Query: 472 acct 475 |||| Sbjct: 85647 acct 85650
>gb|AC025808.8|AC025808 Genomic sequence for Arabidopsis thaliana BAC F18O14 from chromosome I, complete sequence Length = 120977 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 469 catacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatc 528 |||||||||||| |||| || || || || |||| |||||| || || |||||||||||| Sbjct: 109595 catacctctccagaaggaattctggtgttttgtcgtacaagtgcaccagcagcaaccatc 109536 Query: 529 ccatgcttttctacaacaacaccatc 554 ||||||||||| ||||| || ||||| Sbjct: 109535 ccatgcttttcaacaacgaccccatc 109510 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 412 ataaaagcaatctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccat 471 ||||||||||| |||||||| ||||||||||| || || | ||||||||||| |||||| Sbjct: 110059 ataaaagcaatttcctcatcagtgagcttcctgaggaaccttgctgggtttcctccccat 110000 Query: 472 acct 475 |||| Sbjct: 109999 acct 109996
>ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 467 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 526 |||| ||||||||| |||| ||||| || || || ||||||||| ||| ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 527 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 586 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagctt 507 Query: 587 catcc 591 ||||| Sbjct: 506 catcc 502
>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full insert sequence Length = 1238 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 467 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 526 |||| ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| |||||| Sbjct: 716 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 657 Query: 527 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 586 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 656 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagctt 597 Query: 587 catcc 591 ||||| Sbjct: 596 catcc 592
>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full insert sequence Length = 1155 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 467 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 526 |||| ||||||||| |||| ||||| || || || ||||||||| ||| ||| |||||| Sbjct: 626 cccagacctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaacca 567 Query: 527 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 586 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 566 tgctgtgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagctt 507 Query: 587 catcc 591 ||||| Sbjct: 506 catcc 502
>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full insert sequence Length = 1195 Score = 65.9 bits (33), Expect = 1e-07 Identities = 102/125 (81%) Strand = Plus / Minus Query: 467 cccatacctctccacaagggatccttgtattctgtcttacaagggctccggcagcaacca 526 |||| ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| |||||| Sbjct: 718 cccagacctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaacca 659 Query: 527 tcccatgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagctt 586 | | |||||||| || || || ||||| | ||| || || ||||||||||||||||||| Sbjct: 658 tgctgtgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagctt 599 Query: 587 catcc 591 ||||| Sbjct: 598 catcc 594
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 3550621 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550562 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 3550561 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 3550502
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 26722829 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 26722888 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 26722889 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 26722948
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 69686 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 69745 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 69746 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 69805
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Plus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| ||||| || || || ||||||||| ||| ||| ||||||| | Sbjct: 140433 acctctccagaaggaatcctggtgttttgctttacaagggatcctgcaccaaccatgctg 140492 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 140493 tgcttttcaaccaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 140552
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 3550566 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 3550507 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 3550506 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 3550447
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 63.9 bits (32), Expect = 6e-07 Identities = 98/120 (81%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| |||| |||||||| ||||| | ||||| | ||| ||| ||||||| | Sbjct: 65549 acctctccagaaggaatccttgtgttctgcttaacaagcgatcctgcaccaaccatgctg 65490 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 |||||||| || || || ||||| | ||| || || |||||||||||||||||||||||| Sbjct: 65489 tgcttttcaacgaccactccatcaagcagagtggcacccataccaacaaaagcttcatcc 65430
>emb|BX816589.1|CNS0ADBJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1092 Score = 61.9 bits (31), Expect = 2e-06 Identities = 136/171 (79%) Strand = Plus / Minus Query: 421 atctcctcatctgtgagcttcctcagaaatttcgctgggtttccaccccatacctctcca 480 ||||| |||||||| | ||| |||| || || ||||| ||||| ||||| ||||||||| Sbjct: 677 atctcttcatctgttaactttctcatgaactttgctggatttcctccccacacctctcca 618 Query: 481 caagggatccttgtattctgtcttacaagggctccggcagcaaccatcccatgcttttct 540 ||||||| | || |||||| | ||||| | || ||||||||||| |||| || || Sbjct: 617 gaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggcatgtttctca 558 Query: 541 acaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || |||||||| | || |||||||||||||||||||||| |||||| Sbjct: 557 accaccacaccatcaagtagttttgctcccataccaacaaaagcatcatcc 507
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 56.0 bits (28), Expect = 1e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 472 acctctccacaagggatccttgtattctgtcttacaagggctccggcagcaaccatccca 531 ||||||||| ||||||| | || |||||| | ||||| | || ||||||||||| || Sbjct: 8024 acctctccagaagggattcgcgtgttctgtttcacaagagaaccagcagcaaccatggca 7965 Query: 532 tgcttttctacaacaacaccatctaacagggttgctcccataccaacaaaagcttcatcc 591 || || || || || |||||||| | || ||||||||||||||||||||||| |||||| Sbjct: 7964 tgtttctcaaccaccacaccatcaagtagtgttgctcccataccaacaaaagcatcatcc 7905
>ref|NM_126049.3| Arabidopsis thaliana unknown protein AT5G66510 mRNA, complete cds Length = 1223 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 497 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 707 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 648 Query: 498 ctgtcttacaagggctccggcagcaaccat 527 ||| || ||||| ||||| | ||||||||| Sbjct: 647 ctgcctaacaagagctcctgaagcaaccat 618
>gb|AY079385.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 808 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 497 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 573 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 514 Query: 498 ctgtcttacaagggctccggcagcaaccat 527 ||| || ||||| ||||| | ||||||||| Sbjct: 513 ctgcctaacaagagctcctgaagcaaccat 484
>gb|AY045784.1| Arabidopsis thaliana putative ferripyochelin-binding protein (At5g66510) mRNA, complete cds Length = 1163 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 497 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 681 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 622 Query: 498 ctgtcttacaagggctccggcagcaaccat 527 ||| || ||||| ||||| | ||||||||| Sbjct: 621 ctgcctaacaagagctcctgaagcaaccat 592
>emb|BX829487.1|CNS0A1JN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 497 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 403 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 344 Query: 498 ctgtcttacaagggctccggcagcaaccat 527 ||| || ||||| ||||| | ||||||||| Sbjct: 343 ctgcctaacaagagctcctgaagcaaccat 314
>gb|AY087379.1| Arabidopsis thaliana clone 34700 mRNA, complete sequence Length = 1198 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacctctccacaagggatccttgtatt 497 ||||||||||||||| |||||||| || ||||| ||||| ||| | || || || || || Sbjct: 708 cttcctcagaaatttagctgggttgcctccccaaacctcgccagagggaattctagtgtt 649 Query: 498 ctgtcttacaagggctccggcagcaaccat 527 ||| || ||||| ||||| | ||||||||| Sbjct: 648 ctgcctaacaagagctcctgaagcaaccat 619
>emb|BX816366.1|CNS0ADBR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH44ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1058 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 565 gctcccataccaacaaaagcttcatcc 591 |||||||||||||||||||| |||||| Sbjct: 499 gctcccataccaacaaaagcatcatcc 473
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 438 cttcctcagaaatttcgctgggtttccaccccatacct 475 ||||||||||||||| |||||||| || ||||| |||| Sbjct: 39136 cttcctcagaaatttagctgggttgcctccccaaacct 39173
>gb|AC139578.4| Mus musculus BAC clone RP23-188P12 from chromosome 18, complete sequence Length = 179415 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 gagaggaacacagataagcaaagct 210 |||||||| |||||||||||||||| Sbjct: 155531 gagaggaagacagataagcaaagct 155555
>gb|BC049182.1| Mus musculus hairless, mRNA (cDNA clone MGC:54518 IMAGE:6468299), complete cds Length = 5599 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 caagcatggaaccgtgttcctcgtcctgg 300 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|BC040241.1| Homo sapiens WD repeat domain 41, mRNA (cDNA clone MGC:5405 IMAGE:3447269), complete cds Length = 2356 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1418 aatttttgaaataatcttaaactgc 1394
>ref|XM_797853.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510153.10) partial mRNA Length = 1638 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 tcctggtgagcaactttcttc 315 ||||||||||||||||||||| Sbjct: 833 tcctggtgagcaactttcttc 813
>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence Length = 207136 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 caagcatggaaccgtgttcctcgtcctgg 300 |||||| |||||| ||||||||||||||| Sbjct: 196756 caagcagggaaccttgttcctcgtcctgg 196784
>ref|NM_021877.2| Mus musculus hairless (Hr), mRNA Length = 5599 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 caagcatggaaccgtgttcctcgtcctgg 300 |||||| |||||| ||||||||||||||| Sbjct: 4372 caagcagggaaccttgttcctcgtcctgg 4400
>gb|AC120797.9| Mus musculus chromosome 18, clone RP24-81D18, complete sequence Length = 210631 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 186 gagaggaacacagataagcaaagct 210 |||||||| |||||||||||||||| Sbjct: 80364 gagaggaagacagataagcaaagct 80388
>emb|AL834138.1|HSM805349 Homo sapiens mRNA; cDNA DKFZp434J2114 (from clone DKFZp434J2114) Length = 3327 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 2347 aatttttgaaataatcttaaactgc 2323
>emb|CR625903.1| full-length cDNA clone CS0DM014YF08 of Fetal liver of Homo sapiens (human) Length = 1643 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1614 aatttttgaaataatcttaaactgc 1590
>emb|CR616409.1| full-length cDNA clone CS0DL008YJ03 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1654 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1593 aatttttgaaataatcttaaactgc 1569
>dbj|AK023977.1| Homo sapiens cDNA FLJ13915 fis, clone Y79AA1000328, weakly similar to SEL-10 PROTEIN Length = 2301 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1368 aatttttgaaataatcttaaactgc 1344
>dbj|AK021855.1| Homo sapiens cDNA FLJ11793 fis, clone HEMBA1006130, weakly similar to SEL-10 PROTEIN Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1452 aatttttgaaataatcttaaactgc 1428
>dbj|AK001766.1| Homo sapiens cDNA FLJ10904 fis, clone OVARC1000013, weakly similar to APOPTOTIC PROTEASE ACTIVATING FACTOR 1 Length = 2536 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1612 aatttttgaaataatcttaaactgc 1588
>gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, complete sequence Length = 179163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 catctgtgagcttcctcagaa 448 ||||||||||||||||||||| Sbjct: 45502 catctgtgagcttcctcagaa 45482
>ref|NM_018268.2| Homo sapiens WD repeat domain 41 (WDR41), mRNA Length = 2608 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1633 aatttttgaaataatcttaaactgc 1609
>gb|AC022422.5| Homo sapiens chromosome 5 clone CTD-2199L4, complete sequence Length = 245697 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 179495 aatttttgaaataatcttaaactgc 179519
>dbj|AK076280.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632409G21 product:hairless, full insert sequence Length = 2969 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 272 caagcatggaaccgtgttcctcgtcctgg 300 |||||| |||||| ||||||||||||||| Sbjct: 1857 caagcagggaaccttgttcctcgtcctgg 1885
>gb|DQ000563.1| Synthetic construct clone PSF:109395 DKFZp434J2114 gene, complete cds Length = 690 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 656 aatttttgaaataatcttaaactgc 632
>gb|AC154563.2| Mus musculus BAC clone RP23-401E22 from chromosome 14, complete sequence Length = 206798 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 272 caagcatggaaccgtgttcctcgtcctgg 300 |||||| |||||| ||||||||||||||| Sbjct: 150789 caagcagggaaccttgttcctcgtcctgg 150761
>gb|AC010234.5|AC010234 Homo sapiens chromosome 5 clone CTC-337B15, complete sequence Length = 143553 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 124365 aatttttgaaataatcttaaactgc 124341
>gb|AF115511.1| Homo sapiens MSTP048 (MST048) mRNA, complete cds Length = 2388 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1414 aatttttgaaataatcttaaactgc 1390
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 atataagaattcaaactgaag 164 ||||||||||||||||||||| Sbjct: 27034 atataagaattcaaactgaag 27014
>gb|BC001807.1| Homo sapiens cDNA clone IMAGE:3354734, containing frame-shift errors Length = 1713 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 98 aattattgaaataatcttaaactgc 122 |||| |||||||||||||||||||| Sbjct: 1620 aatttttgaaataatcttaaactgc 1596
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ctggtaaatttattctgttt 23 |||||||||||||||||||| Sbjct: 1099092 ctggtaaatttattctgttt 1099073
>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence Length = 190474 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 aatttattctgtttgttcct 29 |||||||||||||||||||| Sbjct: 150657 aatttattctgtttgttcct 150638
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 65184 ctttctcaaaatcaatcttt 65165
>gb|AC135242.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0070D14, complete sequence Length = 174780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 75891 ctttctcaaaatcaatcttt 75910
>emb|AL032621.1|CEY45F3A Caenorhabditis elegans YAC Y45F3A, complete sequence Length = 36654 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 tttcgctgggtttccacccc 469 |||||||||||||||||||| Sbjct: 24346 tttcgctgggtttccacccc 24327
>gb|AC127369.4| Mus musculus BAC clone RP23-26A15 from 8, complete sequence Length = 211411 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 actggtaaatttattctgtt 22 |||||||||||||||||||| Sbjct: 160749 actggtaaatttattctgtt 160730
>ref|XM_760984.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0558) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 tctcaaaatcaatcttttcc 345 |||||||||||||||||||| Sbjct: 817 tctcaaaatcaatcttttcc 836
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 ttgctcccataccaacaaaa 582 |||||||||||||||||||| Sbjct: 728996 ttgctcccataccaacaaaa 729015
>emb|AL138726.12| Human DNA sequence from clone RP1-139G21 on chromosome 6 Contains (part of) the SLC17A1, SLC17A2 and SLC17A3 genes for the sodium phosphate solute carrier family 17 members 1, 2 and 3 and a H2A (histone 2A) pseudogene, complete sequence Length = 136646 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cccaaaattattgaaataat 112 |||||||||||||||||||| Sbjct: 120015 cccaaaattattgaaataat 120034
>emb|AL023693.25|HS32B1 Human DNA sequence from clone RP1-32B1 on chromosome 6q22.33-23.3 Contains the MYB gene for v-myb myeloblastosis viral oncogene homolog (avian), 2 novel genes, the 3' end of a novel protein and a CpG island, complete sequence Length = 188287 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cccaaaattattgaaataat 112 |||||||||||||||||||| Sbjct: 15312 cccaaaattattgaaataat 15331
>emb|X78201.1|SS17BED S.scrofa 17beta-estradiol dehydrogenase mRNA Length = 2886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ttctgtcttacaagggctcc 515 |||||||||||||||||||| Sbjct: 848 ttctgtcttacaagggctcc 829
>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a ribosomal protein L13 (Rpl13) pseudogene, a novel gene and two CpG islands, complete sequence Length = 215675 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ccaaaattattgaaataatc 113 |||||||||||||||||||| Sbjct: 46098 ccaaaattattgaaataatc 46117
>gb|AC117445.12| Homo sapiens 3 BAC RP11-278A4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 31868 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 cccaaaattattgaaataat 112 |||||||||||||||||||| Sbjct: 5004 cccaaaattattgaaataat 4985
>gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, complete sequence Length = 190890 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aagaaggagaggaacacagataag 203 ||||||||| |||||||||||||| Sbjct: 122444 aagaaggaggggaacacagataag 122467
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 15082927 ctttctcaaaatcaatcttt 15082946
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 14729770 ctttctcaaaatcaatcttt 14729751
>ref|NM_214306.1| Sus scrofa 17beta-estradiol dehydrogenase (HSD17B4), mRNA Length = 2886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ttctgtcttacaagggctcc 515 |||||||||||||||||||| Sbjct: 848 ttctgtcttacaagggctcc 829
>gb|AC023881.6| Homo sapiens BAC clone RP11-108C2 from 2, complete sequence Length = 185802 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tgtttgttcctagatcttac 38 |||||||||||||||||||| Sbjct: 133378 tgtttgttcctagatcttac 133359
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 15428 ctttctcaaaatcaatcttt 15447
>emb|AL844511.14| Mouse DNA sequence from clone RP23-244B6 on chromosome 2, complete sequence Length = 144077 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ccatctaacagggttgctcc 569 |||||||||||||||||||| Sbjct: 33156 ccatctaacagggttgctcc 33137
>emb|AL935163.7| Zebrafish DNA sequence from clone CH211-206K20, complete sequence Length = 158350 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 caaaattattgaaataatct 114 |||||||||||||||||||| Sbjct: 132636 caaaattattgaaataatct 132655
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctttctcaaaatcaatcttt 342 |||||||||||||||||||| Sbjct: 15164625 ctttctcaaaatcaatcttt 15164644
>gb|U14378.1|RCU14378 Rana catesbeiana myosin II nonmuscle clone 27 mRNA, partial cds Length = 783 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 aagaaggagaggaacacaga 199 |||||||||||||||||||| Sbjct: 412 aagaaggagaggaacacaga 431 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,061,170 Number of Sequences: 3902068 Number of extensions: 6061170 Number of successful extensions: 128564 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 128097 Number of HSP's gapped (non-prelim): 462 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
