| Clone Name | rbaal32b18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AGRN_HUMAN (O00468) Agrin precursor | 32 | 2.6 | 2 | NED1_SCHPO (Q9UUJ6) Nuclear elongation and deformation protein 1 | 30 | 7.5 | 3 | PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransfera... | 30 | 7.5 | 4 | AGRN_RAT (P25304) Agrin precursor | 30 | 7.5 | 5 | FBLN2_HUMAN (P98095) Fibulin-2 precursor | 30 | 9.7 |
|---|
>AGRN_HUMAN (O00468) Agrin precursor| Length = 2045 Score = 31.6 bits (70), Expect = 2.6 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -2 Query: 422 QDDGTCHGEESQSLLEVSQQPEL--KCRGSDWRSPAIILGLECLESTPCHVK*GKTVCFC 249 QD T + + E QQ + K +G ++P+ LG++C C VK G+ C C Sbjct: 431 QDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCAVKNGQAACEC 490 Query: 248 TQVVMMIY 225 Q +Y Sbjct: 491 LQACSSLY 498
>NED1_SCHPO (Q9UUJ6) Nuclear elongation and deformation protein 1| Length = 656 Score = 30.0 bits (66), Expect = 7.5 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 349 VEVLTGDHLQSFLDLNAWRAHHATLSEEK 263 +EV T D + SF D+N WR+ LS+E+ Sbjct: 562 IEVSTRDEVSSFTDVNFWRSPLLELSDEE 590
>PLCF_HUMAN (Q86UL3) 1-acyl-sn-glycerol-3-phosphate acyltransferase zeta| precursor (EC 2.3.1.51) (1-AGP acyltransferase 6) (1-AGPAT 6) (Lysophosphatidic acid acyltransferase-zeta) (LPAAT-zeta) Length = 456 Score = 30.0 bits (66), Expect = 7.5 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 466 LLLKSNAYVETWPSIRMMEHAMVKNHSLYWKYLN 365 L +KS + W ++RM A KNH LY Y N Sbjct: 45 LYMKSLLKIFAWATLRMERGAKEKNHQLYKPYTN 78
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 30.0 bits (66), Expect = 7.5 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Frame = -2 Query: 422 QDDGTCHGEESQSLLEVSQQPEL--KCRGSDWRSPAIILGLECLESTPCHVK*GKTVCFC 249 QD T + + + E QQ + K +G ++P+ G++C C VK GK C C Sbjct: 326 QDGHTYNNDCWRQQAECRQQRAIPPKHQGPCDQTPSPCHGVQCAFGAVCTVKNGKAECEC 385 Query: 248 TQVVMMIY 225 +V IY Sbjct: 386 QRVCSGIY 393
>FBLN2_HUMAN (P98095) Fibulin-2 precursor| Length = 1184 Score = 29.6 bits (65), Expect = 9.7 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 9/85 (10%) Frame = -2 Query: 476 CL*FTPQKQCLC*DMAFYQDDG-TCHGEESQSLLEVSQQPELKCRGSDWRSPAIILGL-- 306 C+ C C QDDG TC E E Q+P LK S S I L L Sbjct: 620 CINTVGSYHCACFPGFSLQDDGRTCRPEGHPPQPEAPQEPALKSEFSQVASNTIPLPLPQ 679 Query: 305 --ECLESTP----CHVK*GKTVCFC 249 C ++ P C G +C C Sbjct: 680 PNTCKDNGPCKQVCSTVGGSAICSC 704 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,024,281 Number of Sequences: 219361 Number of extensions: 1483095 Number of successful extensions: 3006 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2936 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3006 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)