ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31m17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-136
2gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 167 6e-38
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
4emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-2... 50 0.009
5emb|AL606537.10| Human DNA sequence from clone RP11-53A1 on chro... 44 0.57
6emb|BX571665.6| Zebrafish DNA sequence from clone CH211-276E8 in... 44 0.57
7gb|AC113450.20| Mus musculus chromosome 7, clone RP24-360B13, co... 42 2.2
8gb|AC162285.6| Mus musculus chromosome 7, clone RP23-312O8, comp... 42 2.2
9emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chrom... 42 2.2
10emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chr... 42 2.2
11gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, com... 40 8.8
12gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, c... 40 8.8
13gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, co... 40 8.8
14ref|XM_854396.1| PREDICTED: Canis familiaris similar to hydroxya... 40 8.8
15ref|XM_532894.2| PREDICTED: Canis familiaris similar to hydroxya... 40 8.8
16gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosom... 40 8.8
17gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosom... 40 8.8
18gb|AE004346.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 8.8
19gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete ... 40 8.8
20emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on ch... 40 8.8
21gb|CP000087.1| Rickettsia bellii RML369-C, complete genome 40 8.8
22gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, c... 40 8.8
23gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, com... 40 8.8
24gb|AC144578.2| Homo sapiens chromosome 8, clone XXfos-802716D4, ... 40 8.8
25gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, com... 40 8.8
26dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
27gb|AC135075.5| Homo sapiens chromosome 8, clone RP11-557G24, com... 40 8.8
28dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
29gb|AF076529.2| Butyrivibrio fibrisolvens response regulator-like... 40 8.8
30emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in... 40 8.8
31emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 i... 40 8.8
32emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-3... 40 8.8
33dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.8
34gb|AE000512.1| Thermotoga maritima MSB8, complete genome 40 8.8
35gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complet... 40 8.8
36gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 8.8
37gb|AC154758.2| Mus musculus BAC clone RP24-406J8 from chromosome... 40 8.8
38gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, co... 40 8.8
39emb|AL627392.12| Mouse DNA sequence from clone RP23-185I12 on ch... 40 8.8
40gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome... 40 8.8 
>dbj|AK068085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131P13, full
            insert sequence
          Length = 1515

 Score =  492 bits (248), Expect = e-136
 Identities = 398/448 (88%)
 Strand = Plus / Minus

                                                                        
Query: 200  aggattgacagagagaatggtgcgatggcgatattgaatgttgaggatccaaccttgtca 259
            ||||||||||||||||||||||| || |||| ||||||| | || || ||| | ||||| 
Sbjct: 1051 aggattgacagagagaatggtgcaattgcgacattgaatatagacgacccagctttgtcg 992

                                                                        
Query: 260  atgtgcttcatctcaaaatctccttccattctcccatttggcgtgtttagtgggcatgca 319
            |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 991  atgtgcttcatctcaaaatcaccttccattctcccatttggtgtgtttaatgggcatgca 932

                                                                        
Query: 320  gatgagtactcaaaaccagtctttgggaatattacaggttgctctcccactacaccaaca 379
            ||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||| |||
Sbjct: 931  gatgagtactcaaaaccagtccttggaaatatgacaggttgctctcccacaacacctaca 872

                                                                        
Query: 380  ccccaaacattctctgtccttccattcgcatcggtgacaatccagtgtcgtctgagaagc 439
            |||||||  ||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||
Sbjct: 871  ccccaaatgttctccgtccttccatttgcatcagtgacaatccaatgtcttctgagaagc 812

                                                                        
Query: 440  tgtacagcacgttgagaattatttgtaattctgattctgtaggcaaaaaagaatttcccc 499
            || ||||  || |||||||||||||| |||||||||||||||||||| ||||| |  |||
Sbjct: 811  tgaacagggcgctgagaattatttgtgattctgattctgtaggcaaagaagaactggccc 752

                                                                        
Query: 500  tttaagggttggctccggctttcaatatagacactcctgacttgtacccttatccccaga 559
            || || || |||||||||||||||||||| |||||||||||||| || || |||||||| 
Sbjct: 751  ttcaaaggctggctccggctttcaatataaacactcctgacttgaactctaatccccagg 692

                                                                        
Query: 560  gttgtagcatcactagaacatttgaggagggagtgcggagccaaaatcatcagttcatct 619
            || |||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||
Sbjct: 691  gtagtagcatcactagaacattttaggagggcgtgtggagccaaaatcttcagttcatct 632

                                        
Query: 620  ctgtacttggcagcatccgcaaacctct 647
            |||||||| ||||||||| | |||||||
Sbjct: 631  ctgtacttagcagcatcctcgaacctct 604
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score =  167 bits (84), Expect = 6e-38
 Identities = 147/168 (87%)
 Strand = Plus / Plus

                                                                         
Query: 389   ttctctgtccttccattcgcatcggtgacaatccagtgtcgtctgagaagctgtacagca 448
             ||||| ||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||  
Sbjct: 72022 ttctccgtccttccatttgcatcagtgacaatccaatgtcttctgagaagctgaacaggg 72081

                                                                         
Query: 449   cgttgagaattatttgtaattctgattctgtaggcaaaaaagaatttcccctttaagggt 508
             || |||||||||||||| |||||||||||||||||||| ||||| |  ||||| || || 
Sbjct: 72082 cgctgagaattatttgtgattctgattctgtaggcaaagaagaactggcccttcaaaggc 72141

                                                             
Query: 509   tggctccggctttcaatatagacactcctgacttgtacccttatcccc 556
             |||||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 72142 tggctccggctttcaatataaacactcctgacttgaactctaatcccc 72189



 Score =  141 bits (71), Expect = 3e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                         
Query: 285   ccattctcccatttggcgtgtttagtgggcatgcagatgagtactcaaaaccagtctttg 344
             |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 71838 ccattctcccatttggtgtgtttaatgggcatgcagatgagtactcaaaaccagtccttg 71897

                                                    
Query: 345   ggaatattacaggttgctctcccactacaccaacacccc 383
             | ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 71898 gaaatatgacaggttgctctcccacaacacctacacccc 71936



 Score =  109 bits (55), Expect = 1e-20
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                         
Query: 563   gtagcatcactagaacatttgaggagggagtgcggagccaaaatcatcagttcatctctg 622
             |||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 72711 gtagcatcactagaacattttaggagggcgtgtggagccaaaatcttcagttcatctctg 72770

                            
Query: 623   tacttggcagcatcc 637
             ||||| |||||||||
Sbjct: 72771 tacttagcagcatcc 72785



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                         
Query: 200   aggattgacagagagaatggtgcgatggcgatattgaatgttgaggatccaaccttgtca 259
             ||||||||||||||||||||||| || |||| ||||||||| || || ||| | ||||| 
Sbjct: 71442 aggattgacagagagaatggtgcaattgcgacattgaatgtagacgacccagctttgtcg 71501

                                        
Query: 260   atgtgcttcatctcaaaatctccttcc 286
             |||||||||||||||||||| ||||||
Sbjct: 71502 atgtgcttcatctcaaaatcaccttcc 71528
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  167 bits (84), Expect = 6e-38
 Identities = 147/168 (87%)
 Strand = Plus / Plus

                                                                           
Query: 389     ttctctgtccttccattcgcatcggtgacaatccagtgtcgtctgagaagctgtacagca 448
               ||||| ||||||||||| ||||| ||||||||||| |||| |||||||||||| ||||  
Sbjct: 4185543 ttctccgtccttccatttgcatcagtgacaatccaatgtcttctgagaagctgaacaggg 4185602

                                                                           
Query: 449     cgttgagaattatttgtaattctgattctgtaggcaaaaaagaatttcccctttaagggt 508
               || |||||||||||||| |||||||||||||||||||| ||||| |  ||||| || || 
Sbjct: 4185603 cgctgagaattatttgtgattctgattctgtaggcaaagaagaactggcccttcaaaggc 4185662

                                                               
Query: 509     tggctccggctttcaatatagacactcctgacttgtacccttatcccc 556
               |||||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 4185663 tggctccggctttcaatataaacactcctgacttgaactctaatcccc 4185710



 Score =  141 bits (71), Expect = 3e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                           
Query: 285     ccattctcccatttggcgtgtttagtgggcatgcagatgagtactcaaaaccagtctttg 344
               |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 4185359 ccattctcccatttggtgtgtttaatgggcatgcagatgagtactcaaaaccagtccttg 4185418

                                                      
Query: 345     ggaatattacaggttgctctcccactacaccaacacccc 383
               | ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 4185419 gaaatatgacaggttgctctcccacaacacctacacccc 4185457



 Score =  109 bits (55), Expect = 1e-20
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                           
Query: 563     gtagcatcactagaacatttgaggagggagtgcggagccaaaatcatcagttcatctctg 622
               |||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 4186232 gtagcatcactagaacattttaggagggcgtgtggagccaaaatcttcagttcatctctg 4186291

                              
Query: 623     tacttggcagcatcc 637
               ||||| |||||||||
Sbjct: 4186292 tacttagcagcatcc 4186306



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                           
Query: 200     aggattgacagagagaatggtgcgatggcgatattgaatgttgaggatccaaccttgtca 259
               ||||||||||||||||||||||| || |||| ||||||||| || || ||| | ||||| 
Sbjct: 4184963 aggattgacagagagaatggtgcaattgcgacattgaatgtagacgacccagctttgtcg 4185022

                                          
Query: 260     atgtgcttcatctcaaaatctccttcc 286
               |||||||||||||||||||| ||||||
Sbjct: 4185023 atgtgcttcatctcaaaatcaccttcc 4185049
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>emb|AL355075.6|CNS05TC9 Human chromosome 14 DNA sequence BAC R-203M5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 204654

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 411   cggtgacaatccagtgtcgtctgagaagc 439
             |||||||||||||||||| ||||||||||
Sbjct: 74830 cggtgacaatccagtgtcctctgagaagc 74802
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>emb|AL606537.10| Human DNA sequence from clone RP11-53A1 on chromosome 1 Contains the 3'
              end of the PROX1 gene for prospero-related homeobox protein
              1, complete sequence
          Length = 116821

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 277    atctccttccattctcccattt 298
              ||||||||||||||||||||||
Sbjct: 111799 atctccttccattctcccattt 111778
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>emb|BX571665.6| Zebrafish DNA sequence from clone CH211-276E8 in linkage group 20
             Contains the 5' end of the gene for a novel protein
             similar to vertebrate ring finger protein 144 (RNF144),
             the gene for a novel radical SAM superfamily protein, the
             gene for a novel protein similar to mouse thymidylate
             kinase family LPS-inducible member (Tyki) and a CpG
             island, complete sequence
          Length = 166885

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 28    ctttttatagtagacataacat 49
             ||||||||||||||||||||||
Sbjct: 16545 ctttttatagtagacataacat 16566
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>gb|AC113450.20| Mus musculus chromosome 7, clone RP24-360B13, complete sequence
          Length = 127454

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 461   tttgtaattctgattctgtag 481
             |||||||||||||||||||||
Sbjct: 56392 tttgtaattctgattctgtag 56372
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>gb|AC162285.6| Mus musculus chromosome 7, clone RP23-312O8, complete sequence
          Length = 190344

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 461   tttgtaattctgattctgtag 481
             |||||||||||||||||||||
Sbjct: 74531 tttgtaattctgattctgtag 74511
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>emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chromosome 6 Contains the 5'
             end of the MLN gene for motilin, part of a novel gene and
             a CpG island, complete sequence
          Length = 136886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 277   atctccttccattctcccatttggc 301
             |||||| ||||||||||||||||||
Sbjct: 20389 atctccctccattctcccatttggc 20365
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>emb|AL611951.11| Mouse DNA sequence from clone RP23-265O1 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 191715

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 274    aaaatctccttccattctccc 294
              |||||||||||||||||||||
Sbjct: 166812 aaaatctccttccattctccc 166792
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>gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, complete sequence
          Length = 185237

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    ttacaggttgctctcccact 370
              ||||||||||||||||||||
Sbjct: 166584 ttacaggttgctctcccact 166565
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>gb|AC110913.13| Mus musculus chromosome 19, clone RP24-399E19, complete sequence
          Length = 208309

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ttacaggttgctctcccact 370
              ||||||||||||||||||||
Sbjct: 184597 ttacaggttgctctcccact 184616
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>gb|AC166748.3| Mus musculus chromosome 19, clone RP23-345M21, complete sequence
          Length = 178257

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    ttacaggttgctctcccact 370
              ||||||||||||||||||||
Sbjct: 115850 ttacaggttgctctcccact 115831
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>ref|XM_854396.1| PREDICTED: Canis familiaris similar to hydroxyacyl dehydrogenase,
           subunit A, transcript variant 3 (LOC475687), mRNA
          Length = 2814

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 caaacattctctgtccttcc 402
           ||||||||||||||||||||
Sbjct: 539 caaacattctctgtccttcc 520
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>ref|XM_532894.2| PREDICTED: Canis familiaris similar to hydroxyacyl dehydrogenase,
           subunit A, transcript variant 2 (LOC475687), mRNA
          Length = 2817

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 383 caaacattctctgtccttcc 402
           ||||||||||||||||||||
Sbjct: 539 caaacattctctgtccttcc 520
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>gb|AC123877.5| Mus musculus BAC clone RP23-297J18 from chromosome 5, complete sequence
          Length = 183152

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   caaaatctccttccattctc 292
             ||||||||||||||||||||
Sbjct: 34321 caaaatctccttccattctc 34302
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>gb|AC125542.4| Mus musculus BAC clone RP23-321C24 from chromosome 5, complete sequence
          Length = 194326

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    caaaatctccttccattctc 292
              ||||||||||||||||||||
Sbjct: 134268 caaaatctccttccattctc 134287
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>gb|AE004346.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 3 of
             93 of the complete chromosome
          Length = 10215

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 591   agtgcggagccaaaatcatcagttcatc 618
             |||| ||||||||| |||||||||||||
Sbjct: 10108 agtgtggagccaaattcatcagttcatc 10081
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>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence
          Length = 128294

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   gttgagaattatttgtaatt 469
             ||||||||||||||||||||
Sbjct: 28000 gttgagaattatttgtaatt 28019
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>emb|AL162503.12| Human DNA sequence from clone RP11-420F12 on chromosome 10 Contains the
             GAD2 gene for glutamate decarboxylase 2 (pancreatic islets
             and brain 65kDa), the 3' end of the MYO3A gene for myosin
             IIIA and two CpG islands, complete sequence
          Length = 175594

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ccttcaccttctatttgaca 22
             ||||||||||||||||||||
Sbjct: 20736 ccttcaccttctatttgaca 20755
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>gb|CP000087.1| Rickettsia bellii RML369-C, complete genome
          Length = 1522076

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 456   aattatttgtaattctgatt 475
             ||||||||||||||||||||
Sbjct: 69682 aattatttgtaattctgatt 69663
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>gb|AC152426.10| Mus musculus chromosome 19, clone RP23-216E17, complete sequence
          Length = 217738

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ttacaggttgctctcccact 370
              ||||||||||||||||||||
Sbjct: 143042 ttacaggttgctctcccact 143061
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>gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, complete sequence
          Length = 135609

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  aatctccttccattctccca 295
            ||||||||||||||||||||
Sbjct: 3923 aatctccttccattctccca 3904
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>gb|AC144578.2| Homo sapiens chromosome 8, clone XXfos-802716D4, complete sequence
          Length = 38207

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aatctccttccattctccca 295
             ||||||||||||||||||||
Sbjct: 17158 aatctccttccattctccca 17139
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>gb|AC117829.7| Mus musculus chromosome 19, clone RP24-95D15, complete sequence
          Length = 168084

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ttacaggttgctctcccact 370
              ||||||||||||||||||||
Sbjct: 124617 ttacaggttgctctcccact 124636
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 436      aagctgtacagcacgttgagaatt 459
                ||||||||||||||||||| ||||
Sbjct: 24642698 aagctgtacagcacgttgaaaatt 24642721
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>gb|AC135075.5| Homo sapiens chromosome 8, clone RP11-557G24, complete sequence
          Length = 72016

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aatctccttccattctccca 295
             ||||||||||||||||||||
Sbjct: 16448 aatctccttccattctccca 16429
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>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0040H10
          Length = 173301

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 436    aagctgtacagcacgttgagaatt 459
              ||||||||||||||||||| ||||
Sbjct: 125891 aagctgtacagcacgttgaaaatt 125914
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>gb|AF076529.2| Butyrivibrio fibrisolvens response regulator-like protein and
            histidine kinase-like protein genes, complete cds;
            butyrivibriocin AR10 operon, complete sequence; and
            unknown gene
          Length = 6307

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 573  tagaacatttgaggagggagtgcggagc 600
            |||||||||||| ||||||| |||||||
Sbjct: 2739 tagaacatttgacgagggagagcggagc 2766
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>emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in linkage group 18,
              complete sequence
          Length = 144824

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    atgtttgtgtatttgtgcaa 119
              ||||||||||||||||||||
Sbjct: 133158 atgtttgtgtatttgtgcaa 133177
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>emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 in linkage group 18,
            complete sequence
          Length = 152951

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  atgtttgtgtatttgtgcaa 119
            ||||||||||||||||||||
Sbjct: 6453 atgtttgtgtatttgtgcaa 6434
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>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193301

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ttttatagtagacataacat 49
              ||||||||||||||||||||
Sbjct: 147003 ttttatagtagacataacat 146984
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>dbj|AP002856.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-816H13, complete
              sequence
          Length = 227942

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    tccttccattctcccatttg 299
              ||||||||||||||||||||
Sbjct: 100072 tccttccattctcccatttg 100053
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>gb|AE000512.1| Thermotoga maritima MSB8, complete genome
          Length = 1860725

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 471     tgattctgtaggcaaaaaag 490
               ||||||||||||||||||||
Sbjct: 1711165 tgattctgtaggcaaaaaag 1711146
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>gb|AC138460.4| Mus musculus BAC clone RP23-295A7 from 8, complete sequence
          Length = 186258

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    aaaccagtctttgggaatat 351
              ||||||||||||||||||||
Sbjct: 160611 aaaccagtctttgggaatat 160630
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 71      ctctaaatacttctctaaca 90
               ||||||||||||||||||||
Sbjct: 2017308 ctctaaatacttctctaaca 2017327
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>gb|AC154758.2| Mus musculus BAC clone RP24-406J8 from chromosome 17, complete sequence
          Length = 151012

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   agtctttgggaatattacag 356
             ||||||||||||||||||||
Sbjct: 41641 agtctttgggaatattacag 41660
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>gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, complete sequence
          Length = 183160

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ttacaggttgctctcccact 370
            ||||||||||||||||||||
Sbjct: 1838 ttacaggttgctctcccact 1857
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>emb|AL627392.12| Mouse DNA sequence from clone RP23-185I12 on chromosome 4, complete
              sequence
          Length = 182520

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 482    gcaaaaaagaatttcccctt 501
              ||||||||||||||||||||
Sbjct: 120602 gcaaaaaagaatttcccctt 120583
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>gb|AC163288.4| Mus musculus BAC clone RP23-279M5 from chromosome 8, complete sequence
          Length = 222867

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   aaaccagtctttgggaatat 351
             ||||||||||||||||||||
Sbjct: 40268 aaaccagtctttgggaatat 40287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,413,789
Number of Sequences: 3902068
Number of extensions: 6413789
Number of successful extensions: 123164
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122942
Number of HSP's gapped (non-prelim): 222
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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