ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32b16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048) 195 6e-50
2NAC2_ARATH (Q39013) NAC domain-containing protein 2 (ANAC002) 186 3e-47
3NAC71_ORYSA (Q53NF7) NAC domain-containing protein 71 (ONAC071) 174 1e-43
4NAC68_ORYSA (Q52QH4) NAC domain-containing protein 68 (ONAC068) 158 1e-38
5NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) ... 152 8e-37
6NAC18_ARATH (Q9ZNU2) NAC domain-containing protein 18 (ANAC018) ... 148 9e-36
7NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067) 141 1e-33
8NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) ... 136 5e-32
9NAC94_ARATH (Q9FIW5) Putative NAC domain-containing protein 94 (... 129 7e-30
10NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (AN... 128 1e-29
11NAC42_ARATH (Q9SK55) Putative NAC domain-containing protein 42 (... 115 6e-26
12NAC22_ARATH (Q84TE6) NAC domain-containing protein 21/22 (ANAC02... 115 8e-26
13NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) ... 110 3e-24
14NAC78_ARATH (Q84K00) NAC domain-containing protein 78 (ANAC078) 105 1e-22
15NAC43_ARATH (Q84WP6) NAC domain-containing protein 43 (ANAC043) ... 105 1e-22
16NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076) 102 7e-22
17NAC66_ARATH (Q9M274) NAC domain-containing protein 66 (ANAC066) ... 100 2e-21
18NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074) 96 5e-20
19NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (... 91 2e-18
20NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090) 86 5e-17
21RL11_PSEAE (Q9HWC5) 50S ribosomal protein L11 30 4.6
22CREL1_MOUSE (Q91XD7) Cysteine-rich with EGF-like domain protein ... 29 7.9
23RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit ... 29 7.9

>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)|
          Length = 303

 Score =  195 bits (496), Expect = 6e-50
 Identities = 87/91 (95%), Positives = 91/91 (100%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPKPLAIK 374
           FDPWQLP+MA+YGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVG+PKP+AIK
Sbjct: 49  FDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIK 108

Query: 373 KALVFYAGKAPKGEKTNWIMHEYRLADVDRS 281
           KALVFYAGKAPKGEKTNWIMHEYRLADVDRS
Sbjct: 109 KALVFYAGKAPKGEKTNWIMHEYRLADVDRS 139



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>NAC2_ARATH (Q39013) NAC domain-containing protein 2 (ANAC002)|
          Length = 289

 Score =  186 bits (473), Expect = 3e-47
 Identities = 81/91 (89%), Positives = 88/91 (96%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPKPLAIK 374
           +DPW+LP +A+YGEKEWYFFSPRDRKYPNGSRPNR+AGSGYWKATGADKP+G PKP+ IK
Sbjct: 47  YDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIK 106

Query: 373 KALVFYAGKAPKGEKTNWIMHEYRLADVDRS 281
           KALVFYAGKAPKGEKTNWIMHEYRLADVDRS
Sbjct: 107 KALVFYAGKAPKGEKTNWIMHEYRLADVDRS 137



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>NAC71_ORYSA (Q53NF7) NAC domain-containing protein 71 (ONAC071)|
          Length = 329

 Score =  174 bits (442), Expect = 1e-43
 Identities = 78/91 (85%), Positives = 84/91 (92%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPKPLAIK 374
           F+PW LP+ AM GEKEWYFFSPRDRKYPNG RPNRAAG+GYWKATGADKPVG+P+ +AIK
Sbjct: 49  FNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIK 108

Query: 373 KALVFYAGKAPKGEKTNWIMHEYRLADVDRS 281
           KALVFYAGK PKG KTNWIMHEYRLADVDRS
Sbjct: 109 KALVFYAGKPPKGVKTNWIMHEYRLADVDRS 139



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>NAC68_ORYSA (Q52QH4) NAC domain-containing protein 68 (ONAC068)|
          Length = 318

 Score =  158 bits (399), Expect = 1e-38
 Identities = 70/93 (75%), Positives = 81/93 (87%), Gaps = 3/93 (3%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GTPKPLA 380
           DPW LP+ A++G KEWYFF+PRDRKYPNGSRPNRAAG GYWKATGADKPV   G+ + + 
Sbjct: 62  DPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVG 121

Query: 379 IKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS 281
           IKKALVFY+GKAP+G KT+WIMHEYRLAD DR+
Sbjct: 122 IKKALVFYSGKAPRGVKTDWIMHEYRLADADRA 154



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>NAC19_ARATH (Q9C932) NAC domain-containing protein 19 (ANAC019) (ANAC)|
           (Abscicic-acid-responsive NAC)
          Length = 317

 Score =  152 bits (383), Expect = 8e-37
 Identities = 69/91 (75%), Positives = 75/91 (82%), Gaps = 1/91 (1%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTP-KPLAI 377
           FDPW LP  A++GEKEWYFFSPRDRKYPNGSRPNR AGSGYWKATG DK + T  + + I
Sbjct: 54  FDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGI 113

Query: 376 KKALVFYAGKAPKGEKTNWIMHEYRLADVDR 284
           KKALVFY GKAPKG KTNWIMHEYRL +  R
Sbjct: 114 KKALVFYIGKAPKGTKTNWIMHEYRLIEPSR 144



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>NAC18_ARATH (Q9ZNU2) NAC domain-containing protein 18 (ANAC018) (NO APICAL|
           MERISTEM protein) (AtNAM)
          Length = 320

 Score =  148 bits (374), Expect = 9e-36
 Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 5/97 (5%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-----GTPK 389
           FDPW+LP  A +GE+EWYFFSPRDRKYPNG+RPNRAA SGYWKATG DKPV     G  K
Sbjct: 57  FDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSK 116

Query: 388 PLAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSH 278
            + +KKALVFY+GK PKG K++WIMHEYRL D   +H
Sbjct: 117 KVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTH 153



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>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)|
          Length = 276

 Score =  141 bits (356), Expect = 1e-33
 Identities = 64/86 (74%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GTPKPLAIK 374
           DPW LP  A++G +EWYFF+PRDRKYPNGSRPNRAA SGYWKATGADKPV    +   IK
Sbjct: 58  DPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHNGRTAGIK 117

Query: 373 KALVFYAGKAPKGEKTNWIMHEYRLA 296
           KALVFY GK P+G KT WIMHEYRLA
Sbjct: 118 KALVFYHGKPPRGVKTEWIMHEYRLA 143



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>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)|
           (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP)
          Length = 268

 Score =  136 bits (342), Expect = 5e-32
 Identities = 61/88 (69%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGT-PKPLAI 377
           FDPWQLP+   +GE EWYFFSPR+RKYPNG RPNRAA SGYWKATG DK + +    + +
Sbjct: 49  FDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGV 108

Query: 376 KKALVFYAGKAPKGEKTNWIMHEYRLAD 293
           KKALVFY G+ PKG KT+WIMHEYRL D
Sbjct: 109 KKALVFYKGRPPKGIKTDWIMHEYRLHD 136



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>NAC94_ARATH (Q9FIW5) Putative NAC domain-containing protein 94 (ANAC094)|
          Length = 337

 Score =  129 bits (323), Expect = 7e-30
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 3/95 (3%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV---GTPKPL 383
           +DPW LPK+A  GEKEWYF+ PRDRKY N +RPNR  G G+WKATG D+P+    + + +
Sbjct: 60  YDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCI 119

Query: 382 AIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSH 278
            +KK+LVFY G+A KG KT+W+MHE+RL  +  SH
Sbjct: 120 GLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSH 154



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>NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (ANAC009)|
          Length = 418

 Score =  128 bits (321), Expect = 1e-29
 Identities = 55/88 (62%), Positives = 69/88 (78%), Gaps = 3/88 (3%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTP---KPL 383
           +DPW LPK AM GEKEWYF+ PRDRKY N SRPNR  G+G+WKATG D+P+ +    K +
Sbjct: 56  YDPWDLPKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCI 115

Query: 382 AIKKALVFYAGKAPKGEKTNWIMHEYRL 299
            +KK+LVFY G+A KG KT+W+MHE+RL
Sbjct: 116 GLKKSLVFYKGRAAKGVKTDWMMHEFRL 143



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>NAC42_ARATH (Q9SK55) Putative NAC domain-containing protein 42 (ANAC042)|
          Length = 275

 Score =  115 bits (289), Expect = 6e-26
 Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = -3

Query: 553 FDPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GTPKPLAI 377
           +DPW LP+++  GEKEWYFF  R RKY N  RPNR  GSG+WKATG DKPV      + +
Sbjct: 58  YDPWDLPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGL 117

Query: 376 KKALVFYAGKAPKGEKTNWIMHEYRLADVDRS 281
           KK+LV+Y G A KG KT+W+MHE+RL    ++
Sbjct: 118 KKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKT 149



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>NAC22_ARATH (Q84TE6) NAC domain-containing protein 21/22 (ANAC021) (ANAC022)|
          Length = 324

 Score =  115 bits (288), Expect = 8e-26
 Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GTPKPLAIK 374
           +PW +PKMA  G K+WYF+S RDRKY  G R NRA  +GYWKATG D+ +    K + ++
Sbjct: 61  EPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMR 120

Query: 373 KALVFYAGKAPKGEKTNWIMHEYRLADVDRSHQHDMTCAK 254
           K LVFY G+AP+G KT+W+MHE+RL        H ++  K
Sbjct: 121 KTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPK 160



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>NAC77_ORYSA (Q5CD17) NAC domain-containing protein 77 (ONAC077) (ONAC300)|
          Length = 396

 Score =  110 bits (274), Expect = 3e-24
 Identities = 53/102 (51%), Positives = 62/102 (60%), Gaps = 18/102 (17%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPKPLAI-- 377
           +PW LP  A  GEKEWYFFS +D KYP G R NRA   GYWKATG D+ +   +P A+  
Sbjct: 60  EPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREI-FRQPAAVNT 118

Query: 376 ----------------KKALVFYAGKAPKGEKTNWIMHEYRL 299
                           KK LVFY G+APKG KTNW+MHE+RL
Sbjct: 119 SSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL 160



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>NAC78_ARATH (Q84K00) NAC domain-containing protein 78 (ANAC078)|
          Length = 567

 Score =  105 bits (261), Expect = 1e-22
 Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEK--EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GTPKPLA 380
           +PW LP  +    +  EWYFFS  D+KY NGS+ NRA   GYWK TG D+ +    + + 
Sbjct: 50  EPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVG 109

Query: 379 IKKALVFYAGKAPKGEKTNWIMHEYRLADVD 287
           +KK LV++ G+AP+GE+TNW+MHEYRL+D D
Sbjct: 110 MKKTLVYHKGRAPRGERTNWVMHEYRLSDED 140



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>NAC43_ARATH (Q84WP6) NAC domain-containing protein 43 (ANAC043) (NAC SECONDARY|
           WALL THICKENING PROMOTING FACTOR 1) (Protein EMBRYO
           DEFECTIVE 2301)
          Length = 365

 Score =  105 bits (261), Expect = 1e-22
 Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
 Frame = -3

Query: 550 DPWQLPKMAMYG---EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GTPKPL 383
           +PW + +M   G   + +WYFFS +D+KYP G+R NRA  +G+WKATG DK +    + +
Sbjct: 57  EPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRI 116

Query: 382 AIKKALVFYAGKAPKGEKTNWIMHEYRLAD 293
            ++K LVFY G+AP G+K++WIMHEYRL D
Sbjct: 117 GMRKTLVFYKGRAPHGQKSDWIMHEYRLDD 146



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>NAC76_ORYSA (Q5Z6B6) NAC domain-containing protein 76 (ONAC076)|
          Length = 276

 Score =  102 bits (254), Expect = 7e-22
 Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
 Frame = -3

Query: 550 DPWQLPKMAMYG---EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV--GTPKP 386
           +PW L      G   + EWYFFS +D+KYP G+R NRA  +G+WKATG DK +       
Sbjct: 51  EPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACR 110

Query: 385 LAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSHQHD 269
           + ++K LVFY G+AP G+KT+WIMHEYRL   +   Q D
Sbjct: 111 IGMRKTLVFYVGRAPHGKKTDWIMHEYRLDQDNVDVQED 149



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>NAC66_ARATH (Q9M274) NAC domain-containing protein 66 (ANAC066) (NAC SECONDARY|
           WALL THICKENING PROMOTING FACTOR 2)
          Length = 334

 Score =  100 bits (250), Expect = 2e-21
 Identities = 44/88 (50%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
 Frame = -3

Query: 550 DPWQLPKMAMYG---EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGT-PKPL 383
           +PW + +M   G   + +WYF+S +D+KYP G+R NRA   G+WKATG DK + T    +
Sbjct: 52  EPWDIQEMCKIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRI 111

Query: 382 AIKKALVFYAGKAPKGEKTNWIMHEYRL 299
            ++K LVFY G+AP G+K++WIMHEYRL
Sbjct: 112 GMRKTLVFYKGRAPHGQKSDWIMHEYRL 139



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>NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074)|
          Length = 489

 Score = 96.3 bits (238), Expect = 5e-20
 Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
 Frame = -3

Query: 550 DPWQLPKMAMYG--EKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTPK-PLA 380
           +PW LP        + +W+FF+ RDRKYPNGSR NRA  +GYWK+TG D+ +   K  + 
Sbjct: 50  EPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIG 109

Query: 379 IKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSHQHDMTCAKML 248
            KK LVF+ G+ P G +T WIMHEY + + +     DM  A +L
Sbjct: 110 TKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMKDAYVL 153



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>NAC61_ARATH (Q9M290) Putative NAC domain-containing protein 61 (ANAC061)|
          Length = 228

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
 Frame = -3

Query: 550 DPWQLPKMAMYGEK------EWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTP- 392
           +P QLP +A  GE+      +W FF PR  +   G RP+R  GSGYWKATG+  PV +P 
Sbjct: 47  EPTQLPNLA--GERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPD 104

Query: 391 -KPLAIKKALVFYAGKAPKGEKTNWIMHEYRLAD 293
            + + +KK +VFY GKAP G KT W M+EY+  +
Sbjct: 105 NRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVE 138



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>NAC90_ARATH (Q9FMR3) NAC domain-containing protein 90 (ANAC090)|
          Length = 235

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
 Frame = -3

Query: 550 DPWQLPKMA---MYGEKE-WYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGTP--K 389
           +P  LP +A     G+ E W+FF PR  +   G RP+R  GSGYWKATG+  PV +   K
Sbjct: 48  EPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNK 107

Query: 388 PLAIKKALVFYAGKAPKGEKTNWIMHEYRLAD 293
            +  KK +VFY GKAP G KT W M+EY   D
Sbjct: 108 MIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVD 139



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>RL11_PSEAE (Q9HWC5) 50S ribosomal protein L11|
          Length = 143

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = -3

Query: 397 TPKPLAIKKALVFYAGKA-PKGEKTNWIMHEYRLADVDRSHQHDMTCAKMLQSVRRIASS 221
           TP  + +KKA    +G A P  +K   +    +L ++ ++ Q D+T A +  +VR IA S
Sbjct: 74  TPAAVLLKKAAGITSGSARPNSQKVGTVTRA-QLEEIAKTKQADLTAADLDAAVRTIAGS 132



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>CREL1_MOUSE (Q91XD7) Cysteine-rich with EGF-like domain protein 1 precursor|
          Length = 420

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
 Frame = -3

Query: 331 KTNWIMHEYRLADVDRSHQHDMTCAKMLQSVRRIASSGGRLCASMCV-CVSIWPYGC 164
           K  W +H  +  D+D       TC      V    S   R CA  C+ C+   P  C
Sbjct: 233 KKGWALHHLKCVDIDECGTEQATCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRC 289



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>RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
           (RNA polymerase I 194 kDa subunit) (RPA194)
          Length = 1716

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -2

Query: 251 ASKRSPHCIIGRAVVRK 201
           A+KR PHC  GR+VVRK
Sbjct: 201 AAKRCPHCKTGRSVVRK 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,833,545
Number of Sequences: 219361
Number of extensions: 1368870
Number of successful extensions: 4056
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4026
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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