ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal32b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full insert mRNA sequence Length = 2298 Score = 620 bits (313), Expect = e-174 Identities = 408/441 (92%), Gaps = 8/441 (1%) Strand = Plus / Minus Query: 143 tctgtctgtcatcatgtacaaaagagagctagaaattctgcaacgaggggctgtccggag 202 |||||| |||||||||||||||||||||||| |||||||| ||||||| |||| | |||| Sbjct: 2116 tctgtcggtcatcatgtacaaaagagagctaaaaattctgaaacgaggcgctgcctggag 2057 Query: 203 cct------caggagacggttttgttttcttcannnnnnncctgttacctcgggccggac 256 | | ||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 2056 cttgtcgatcaggagacgattttgttttgttc--ttttttcctgttacctcgggccggac 1999 Query: 257 agctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgtcgcggagcc 316 ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||| Sbjct: 1998 agctccaccgcccggaggttgtaggtggagtcgacgatccagtcgttgtttcgcggggcc 1939 Query: 317 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1938 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 1879 Query: 377 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccc 436 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1878 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggcgacccc 1819 Query: 437 tgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgctccacgtacacgctc 496 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1818 tgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacgatg 1759 Query: 497 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccag 556 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1758 tgcaggtccgggtcctccagcatctccacattcttctctttcagcagccctttcacccag 1699 Query: 557 tcaagcagcatgacatcgtcg 577 ||||||||||||||||||||| Sbjct: 1698 tcaagcagcatgacatcgtcg 1678
>ref|XM_472733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1887 Score = 414 bits (209), Expect = e-112 Identities = 302/333 (90%) Strand = Plus / Minus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 1887 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1828 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1768 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1708 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 1707 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1648 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1588 Query: 541 cagccctttcacccagtcaagcagcatgacatc 573 |||||||||||||| || |||| ||| ||||| Sbjct: 1587 gagccctttcacccaatcgagcaacatcacatc 1555
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full insert sequence Length = 2296 Score = 414 bits (209), Expect = e-112 Identities = 302/333 (90%) Strand = Plus / Minus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2089 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 2030 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1970 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1910 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 1909 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1850 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1790 Query: 541 cagccctttcacccagtcaagcagcatgacatc 573 |||||||||||||| || |||| ||| ||||| Sbjct: 1789 gagccctttcacccaatcgagcaacatcacatc 1757
>dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E09, full insert sequence Length = 1161 Score = 414 bits (209), Expect = e-112 Identities = 302/333 (90%) Strand = Plus / Minus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 541 cagccctttcacccagtcaagcagcatgacatc 573 |||||||||||||| || |||| ||| ||||| Sbjct: 532 gagccctttcacccaatcgagcaacatcacatc 500
>dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B11, full insert sequence Length = 1161 Score = 414 bits (209), Expect = e-112 Identities = 302/333 (90%) Strand = Plus / Minus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 541 cagccctttcacccagtcaagcagcatgacatc 573 |||||||||||||| || |||| ||| ||||| Sbjct: 532 gagccctttcacccaatcgagcaacatcacatc 500
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein kinase 1 mRNA, complete cds Length = 2380 Score = 406 bits (205), Expect = e-110 Identities = 301/333 (90%) Strand = Plus / Minus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2007 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1948 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1947 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttttgccactcctc 1888 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1887 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1828 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 1827 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1768 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1708 Query: 541 cagccctttcacccagtcaagcagcatgacatc 573 |||||||||||||| || |||| ||| ||||| Sbjct: 1707 gagccctttcacccaatcgagcaacatcacatc 1675
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 406 bits (205), Expect = e-110 Identities = 286/313 (91%) Strand = Plus / Plus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 51112 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 51171 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51172 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 51231 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51232 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 51291 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 51292 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 51351 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51352 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 51411 Query: 541 cagccctttcacc 553 |||||||||||| Sbjct: 51412 gagccctttcacc 51424
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 406 bits (205), Expect = e-110 Identities = 286/313 (91%) Strand = Plus / Plus Query: 241 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 300 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 22842337 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 22842396 Query: 301 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 360 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842397 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 22842456 Query: 361 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 420 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842457 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 22842516 Query: 421 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtg 480 ||||||||| || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct: 22842517 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 22842576 Query: 481 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 540 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842577 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 22842636 Query: 541 cagccctttcacc 553 |||||||||||| Sbjct: 22842637 gagccctttcacc 22842649
>emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein Length = 2068 Score = 402 bits (203), Expect = e-109 Identities = 302/335 (90%) Strand = Plus / Minus Query: 242 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 301 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 1877 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 1818 Query: 302 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 361 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 1817 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 1758 Query: 362 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 421 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1757 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 1698 Query: 422 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgc 481 |||||||| || |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 1697 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 1638 Query: 482 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 541 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 1637 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 1578 Query: 542 agccctttcacccagtcaagcagcatgacatcgtc 576 ||| | |||||||||||||| |||||||| ||||| Sbjct: 1577 agcgccttcacccagtcaaggagcatgacgtcgtc 1543
>emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryogenesis receptor-like kinase 1, exons 1-11 Length = 5715 Score = 373 bits (188), Expect = e-100 Identities = 281/312 (90%) Strand = Plus / Minus Query: 242 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 301 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 4993 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 4934 Query: 302 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 361 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 4933 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 4874 Query: 362 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 421 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 4873 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 4814 Query: 422 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgc 481 |||||||| || |||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 4813 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 4754 Query: 482 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 541 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 4753 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 4694 Query: 542 agccctttcacc 553 ||| | |||||| Sbjct: 4693 agcgccttcacc 4682
>emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein Length = 2077 Score = 228 bits (115), Expect = 2e-56 Identities = 280/335 (83%) Strand = Plus / Minus Query: 242 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 301 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 1886 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 1827 Query: 302 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 361 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 1826 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1767 Query: 362 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 421 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1766 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1707 Query: 422 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgc 481 |||| || || ||||||||||| || || |||||||| || || |||||||| | | Sbjct: 1706 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 1647 Query: 482 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 541 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 1646 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 1587 Query: 542 agccctttcacccagtcaagcagcatgacatcgtc 576 || ||||||||||||||||| ||||| |||||||| Sbjct: 1586 agtcctttcacccagtcaagaagcataacatcgtc 1552
>gb|BT009223.1| Triticum aestivum clone wle1n.pk0076.d4:fis, full insert mRNA sequence Length = 1651 Score = 216 bits (109), Expect = 6e-53 Identities = 274/329 (83%) Strand = Plus / Minus Query: 248 gggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgt 307 ||||| ||||| ||||| || |||||||| | |||||||| || |||||||||||| | Sbjct: 1368 gggccagacagttccacggcgcggaggttatatgtggagtcaacaatccagtcgttgcga 1309 Query: 308 cgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcccagcgc 367 | ||||||| ||| |||||||||| ||||||||||||||||||||| |||||||| | | Sbjct: 1308 agaggagccaactctgcctcctgcctgaccacctccaccttctgccattcctcccatctc 1249 Query: 368 tccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatc 427 || |||| ||||| || |||||||||||||| ||||||||||||||||| || |||| Sbjct: 1248 tctgccaagccgtcaccttccagcatcctcacgacctccgacatcttggggcgctccact 1189 Query: 428 ggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgctccacg 487 || || |||||||||||||||||||| ||||||||||| | ||||||| | ||| | Sbjct: 1188 ggcgagccctgcgtgcacagcagcgctacctggatcagagattccacctcggtctcttca 1129 Query: 488 tacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccct 547 || |||||||| ||| ||||||||||||||||| || || ||||| |||| || ||| Sbjct: 1128 tagttgctctgcaagtctgggtccaccagcatctcaacttttttctccttcaacaatcct 1069 Query: 548 ttcacccagtcaagcagcatgacatcgtc 576 |||||||||||||| ||||| |||||||| Sbjct: 1068 ttcacccagtcaagaagcataacatcgtc 1040
>emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11 Length = 5484 Score = 198 bits (100), Expect = 1e-47 Identities = 259/312 (83%) Strand = Plus / Minus Query: 242 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 301 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 5019 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 4960 Query: 302 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 361 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 4959 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 4900 Query: 362 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 421 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 4899 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 4840 Query: 422 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccaccttgtgc 481 |||| || || ||||||||||| || || |||||||| || || |||||||| | | Sbjct: 4839 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 4780 Query: 482 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 541 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 4779 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 4720 Query: 542 agccctttcacc 553 || ||||||||| Sbjct: 4719 agtcctttcacc 4708
>gb|AY110115.1| Zea mays CL444_1 mRNA sequence Length = 2474 Score = 163 bits (82), Expect = 8e-37 Identities = 184/218 (84%) Strand = Plus / Minus Query: 242 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 301 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 2114 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 2055 Query: 302 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 361 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 2054 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1995 Query: 362 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 421 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1994 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1935 Query: 422 tccatcggtgacccctgcgtgcacagcagcgccacctg 459 |||| ||| || ||||||||||| || || |||||||| Sbjct: 1934 tccaacggggagccctgcgtgcagaggagtgccacctg 1897 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 545 cctttcacccagtcaagcagcatgacatcgtc 576 ||||||||||||||||| ||||| |||||||| Sbjct: 1811 cctttcacccagtcaagaagcataacatcgtc 1780
>ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2503 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2227 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2168 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2167 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2111
>ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2037 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 1978 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 1977 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 1921
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 95570 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 95629 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 95630 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 95686
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 27959842 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 27959901 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 27959902 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 27959958
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 65184 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 65125 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 65124 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 65068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 28051166 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 28051225 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 28051226 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 28051282
>dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O14, full insert sequence Length = 2507 Score = 97.6 bits (49), Expect = 4e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2231 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2172 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 453 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2171 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2115
>emb|AJ400870.1|ZMA400870 Zea mays partial mRNA for somatic embryogenesis receptor-like kinase 3, (serk3 gene) Length = 1622 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 506 gggtccaccagcatctccaccttcttctctttcagcagccctttcacccagtcaagcagc 565 |||||||||| |||||||||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 1544 gggtccaccaacatctccacctttttctccttcagcagtcctttcacccagtcaagaagc 1485 Query: 566 atgacatc 573 || ||||| Sbjct: 1484 ataacatc 1477
>ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2415 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 397 caccacctccgacat 411 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 10639696 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 10639637 Query: 397 caccacctccgacat 411 |||||||| ||||| Sbjct: 10639636 aaccacctctgacat 10639622 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 359 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 418 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 30335181 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 30335240 Query: 419 c 419 | Sbjct: 30335241 c 30335241 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ccgcctcctgccggaccacct 341 ||||||||||||||||||||| Sbjct: 24942555 ccgcctcctgccggaccacct 24942575 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 cacctggatcagcgcctccaccttgtgct 482 |||| |||||||||||||||||| ||||| Sbjct: 220561 cacccggatcagcgcctccacctcgtgct 220589
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 57386 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 57327 Query: 397 caccacctccgacat 411 |||||||| ||||| Sbjct: 57326 aaccacctctgacat 57312
>dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N08, full insert sequence Length = 2415 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 397 caccacctccgacat 411 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887
>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete cds Length = 1890 Score = 83.8 bits (42), Expect = 6e-13 Identities = 183/230 (79%) Strand = Plus / Minus Query: 344 accttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcaccacc 403 ||||||||||| |||||||| | ||| || || || || || || ||||||||||||||| Sbjct: 1781 accttctgccattcctcccatctctcagcaaggccatcaccttcgagcatcctcaccacc 1722 Query: 404 tccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctggatc 463 || |||||||||||||| ||||| || || ||||| || || |||| | || ||||| Sbjct: 1721 tctgacatcttgggccgctccattggggagccctgggtacatagcaaagttacttggata 1662 Query: 464 agcgcctccaccttgtgctccacgtacacgctctgcaggtccgggtccaccagcatctcc 523 |||| |||||||| |||||| || | ||| || |||||||| |||| ||| ||| Sbjct: 1661 agcgactccacctcagcctccacatagtcatcctggagatccgggtcgaccaacatgtcc 1602 Query: 524 accttcttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 | ||| |||||||||||||| ||||| ||||| || |||| ||||||||| Sbjct: 1601 agctttttctctttcagcagtccttttacccaatccagcaacatgacatc 1552
>gb|AY104736.1| Zea mays PCO086463 mRNA sequence Length = 1810 Score = 83.8 bits (42), Expect = 6e-13 Identities = 117/142 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||| ||||| ||||| || |||||||||||||||||||| | ||| || || || |||| Sbjct: 1316 cctcttgccgtaccacttctaccttctgccactcctcccacctctcggcgagaccatcgc 1257 Query: 384 cctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgcgtgc 443 | || ||||||||||| |||||||||||||| || || ||||| || | ||| |||| Sbjct: 1256 cttcaagcatcctcacaacctccgacatcttaggacgttccatggggttgctctgagtgc 1197 Query: 444 acagcagcgccacctggatcag 465 | || ||||||||||||||||| Sbjct: 1196 agaggagcgccacctggatcag 1175 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 527 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 |||||||| || |||| ||| || ||||||||||| ||||||||||| Sbjct: 1113 ttcttctccttgagcaaccccttgacccagtcaagaagcatgacatc 1067
>dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F13, full insert sequence Length = 2968 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcc 395 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 2476 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatcc 2418
>dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesis receptor kinase 1, complete cds Length = 1866 Score = 73.8 bits (37), Expect = 6e-10 Identities = 184/233 (78%) Strand = Plus / Minus Query: 341 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 400 |||||||| |||||||| ||||| ||||| |||| || || || || ||||| || || Sbjct: 1763 tccaccttttgccactcatcccaccgctctgccaagccatcaccttcaagcattctaaca 1704 Query: 401 acctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctgg 460 || ||||||||||||||||||||||| || || || || ||||| |||| ||| |||||| Sbjct: 1703 acttccgacatcttgggccggtccataggggagccttgagtgcagagcaacgcaacctgg 1644 Query: 461 atcagcgcctccaccttgtgctccacgtacacgctctgcaggtccgggtccaccagcatc 520 || || |||||||| ||||| || | |||| || || ||||| || ||||| Sbjct: 1643 ataagttgctccacctcagcttccacataattgttctggagatcagggtcaactagcatt 1584 Query: 521 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 || | |||||| || ||||| || ||||||||||| ||||||||||||||||| Sbjct: 1583 tctaacttcttttccttcagaagtcctttcacccaatcaagcagcatgacatc 1531
>gb|AY106186.1| Zea mays PCO110698 mRNA sequence Length = 611 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Minus Query: 337 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 396 ||||||||||| ||||||||||||||| | ||| || || || |||||||||||||||| Sbjct: 355 cacctccacctgctgccactcctcccacctctcggcgaggccctcgccctccagcatccg 296 Query: 397 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccac 456 |||||||| ||||| || |||||| || ||| |||||||||| |||||||| | Sbjct: 295 gaccacctcggacatggacgggcggtcctcgggcgacgcctgcgtgcagagcagcgcgat 236 Query: 457 ctggatca 464 |||||||| Sbjct: 235 ctggatca 228
>gb|AY108393.1| Zea mays PCO126676 mRNA sequence Length = 564 Score = 67.9 bits (34), Expect = 3e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 341 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 400 ||||| |||||| || ||||||| | ||| || |||||||| |||||||||||||| | | Sbjct: 277 tccacgttctgcgacgcctcccatctctcggcgagcccgtccccctccagcatcctgatc 218 Query: 401 acctccgacatcttgggccggt 422 ||||| |||||| ||||||||| Sbjct: 217 acctcggacatcctgggccggt 196
>ref|NM_103144.3| Arabidopsis thaliana SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase AT1G34210 (SERK2) mRNA, complete cds Length = 3461 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 497 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcaccca 555 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||||| Sbjct: 2036 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcaccca 1978
>ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4009 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) gene, complete cds Length = 4206 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 380 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 439 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 4002 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 3943 Query: 440 gtgcacagcagcgccacctggat 462 ||||| |||||||| |||||||| Sbjct: 3942 gtgcatagcagcgcaacctggat 3920
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) mRNA, complete cds Length = 2392 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 380 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 439 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 1972 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 1913 Query: 440 gtgcacagcagcgccacctggat 462 ||||| |||||||| |||||||| Sbjct: 1912 gtgcatagcagcgcaacctggat 1890 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Minus Query: 530 ttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 ||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1822 ttctctttcagaagtccttttacccaatcaagcagcataacatc 1779
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4354825 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4354766 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 4354765 cttcaagcatcctcaccacctccgccatctt 4354735 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4343521 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4343462 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 4343461 cttcaagcatcctcacaacctccgccatcttggg 4343428 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 21571634 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 21571682 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttggg 417 |||||||||||||||||| ||||||||| Sbjct: 4438935 agcatcctcaccacctccaccatcttggg 4438907
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 117619 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 117560 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 117559 cttcaagcatcctcaccacctccgccatctt 117529 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 106315 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 106256 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 106255 cttcaagcatcctcacaacctccgccatcttggg 106222
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2001 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1942 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 1941 cttcaagcatcctcaccacctccgccatctt 1911 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttggg 417 |||||||||||||||||| ||||||||| Sbjct: 86111 agcatcctcaccacctccaccatcttggg 86083
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full insert sequence Length = 4009 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C11, full insert sequence Length = 1782 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1559 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1500 Query: 384 cctccagcatcctcaccacctccgacatctt 414 | || ||||||||||||||||||| |||||| Sbjct: 1499 cttcaagcatcctcaccacctccgccatctt 1469
>ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2674 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981
>gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced somatic embryogenesis receptor kinase 1 (BISERK1) mRNA, complete cds Length = 2351 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1892 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1833 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 1832 cttcaagcatcctcacaacctccgccatcttggg 1799
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family receptor-like protein kinase, complete cds Length = 2674 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2019 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1960 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 1959 cttcaagcatcctcacaacctccgccatcttggg 1926
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full insert sequence Length = 2674 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 324 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 383 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 384 cctccagcatcctcaccacctccgacatcttggg 417 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1167 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1215
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 359 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 418 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 16041 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 16100 Query: 419 c 419 | Sbjct: 16101 c 16101
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 359 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 418 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 136098 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 136157 Query: 419 c 419 | Sbjct: 136158 c 136158
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 31808 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 31856
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 374 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full insert sequence Length = 2639 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 359 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 418 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 2092 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 2033 Query: 419 c 419 | Sbjct: 2032 c 2032
>gb|AC007454.3|F23M19 Arabidopsis thaliana chromosome 1 BAC F23M19 sequence, complete sequence Length = 88401 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 497 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacc 553 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||| Sbjct: 72334 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcacc 72390
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full insert sequence Length = 1432 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 375 gcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 422 ||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1169 gcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1216
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 338 acctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctc 397 |||||||| || |||||||| ||||| | |||||| ||||| || || |||||||||||| Sbjct: 81304 acctccacgttttgccactcttcccacctctccgcaagcccttctccttccagcatcctc 81363 Query: 398 accacctccgacatc 412 || || || |||||| Sbjct: 81364 acaacttcagacatc 81378
>ref|NM_105841.3| Arabidopsis thaliana SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase AT1G71830 (SERK1) mRNA, complete cds Length = 2565 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 517 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 576 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 577 g 577 | Sbjct: 1956 g 1956 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 426 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 427 cggtgacccctgcgtgcacagcagcgccac 456 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>gb|AY048200.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 2462 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 517 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 576 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 577 g 577 | Sbjct: 1956 g 1956 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 426 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 427 cggtgacccctgcgtgcacagcagcgccac 456 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>gb|BT002217.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 1878 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 517 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 576 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 1599 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1540 Query: 577 g 577 | Sbjct: 1539 g 1539 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 426 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 1749 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 1690 Query: 427 cggtgacccctgcgtgcacagcagcgccac 456 ||||| || |||||||| |||| |||||| Sbjct: 1689 tggtgatccttgcgtgcatagcaacgccac 1660
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttgggccg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 1820 agcatcctcaccacgtccgacatcttaggccg 1789
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 agcatcctcaccacctccgacatcttgggccg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 6765867 agcatcctcaccacgtccgacatcttaggccg 6765898 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 gtcgccctccagcatcctcaccacctccg 407 |||||||||||||||||||| | |||||| Sbjct: 38314121 gtcgccctccagcatcctcagcgcctccg 38314093
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 agcatcctcaccacctccgacatcttgggccg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 118019 agcatcctcaccacgtccgacatcttaggccg 118050
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 389 agcatcctcaccacctccgacatcttgggccg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 47928 agcatcctcaccacgtccgacatcttaggccg 47959
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full insert sequence Length = 1730 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttgggccg 420 |||||||||||||| ||||||||||| ||||| Sbjct: 1374 agcatcctcaccacgtccgacatcttaggccg 1343
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 gccctccagcatcctcaccacctc 405 |||||||||||||||||||||||| Sbjct: 3780962 gccctccagcatcctcaccacctc 3780985 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 gccagctccgcctcctgccgg 334 ||||||||||||||||||||| Sbjct: 4036418 gccagctccgcctcctgccgg 4036438 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 456 cctggatcagcgcctccacct 476 ||||||||||||||||||||| Sbjct: 1898534 cctggatcagcgcctccacct 1898514
>ref|NM_119497.3| Arabidopsis thaliana BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase AT4G33430 (BAK1) mRNA, complete cds Length = 2579 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 527 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 ||||||||||| | || ||||||||||||||| || | ||||||||| Sbjct: 2033 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatc 1987
>ref|NM_185793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttctc 534 ||||||||||| ||||||||||||||| Sbjct: 546 gtccaccagcacctccaccttcttctc 520
>gb|AF384970.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 3 (SERK3) mRNA, complete cds Length = 2507 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 527 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatc 573 ||||||||||| | || ||||||||||||||| || | ||||||||| Sbjct: 2032 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatc 1986
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttctc 534 ||||||||||| ||||||||||||||| Sbjct: 9333911 gtccaccagcacctccaccttcttctc 9333885
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttctc 534 ||||||||||| ||||||||||||||| Sbjct: 101252 gtccaccagcacctccaccttcttctc 101226
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttctc 534 ||||||||||| ||||||||||||||| Sbjct: 62321 gtccaccagcacctccaccttcttctc 62295
>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full insert sequence Length = 2500 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttctc 534 ||||||||||| ||||||||||||||| Sbjct: 1768 gtccaccagcacctccaccttcttctc 1742
>ref|NM_032727.2| Homo sapiens internexin neuronal intermediate filament protein, alpha (INA), mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagca 392 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>gb|AY249867.1| Manis pentadactyla recombination activating protein 1 (RAG1) gene, partial cds Length = 797 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 517 catctccaccttcttctctttcagca 542 ||||||||||||||||||| |||||| Sbjct: 755 catctccaccttcttctctgtcagca 730
>emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-like protein and s2539 gene for putative peroxidase Length = 9329 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 365 cgctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 414 ||||| || ||||||||||| |||||||| | |||||||| |||||||| Sbjct: 157 cgctctgcaagcccgtcgccttccagcatgcggaccacctctgacatctt 108
>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the INA gene for internexin neuronal intermediate filament protein alpha, the RNF134 gene for ring finger protein 134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA box binding protein (TBP)-associated factor, a novel gene, the 5' end of the PDCD11 gene for programmed cell death 11 and four CpG islands, complete sequence Length = 174474 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagca 392 ||||||||||||||||| |||||||| Sbjct: 29659 ctccgccagcccgtcgcgctccagca 29634
>ref|XM_784841.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584997), mRNA Length = 5535 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 530 ttctctttcagcagccctttca 551 |||||||||||||||||||||| Sbjct: 4139 ttctctttcagcagccctttca 4118
>ref|XM_784820.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584976), mRNA Length = 5670 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 530 ttctctttcagcagccctttca 551 |||||||||||||||||||||| Sbjct: 4235 ttctctttcagcagccctttca 4214
>gb|S78296.1| neurofilament-66 [human, fetal brain, mRNA, 3197 nt] Length = 3197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagca 392 ||||||||||||||||| |||||||| Sbjct: 555 ctccgccagcccgtcgcgctccagca 530
>emb|BX814202.1|CNS0AEBB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 657 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 426 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 253 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 194 Query: 427 cggtgacccctgcgtgcacagcagcgccac 456 ||||| || |||||||| |||| |||||| Sbjct: 193 tggtgatccttgcgtgcatagcaacgccac 164 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 517 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 576 |||||| | ||||||||| |||| || |||||||||||||||| | |||||| ||||| Sbjct: 103 catctctagcttcttctccttcaacaatactttcacccagtcaagtaacatgacgtcgtc 44 Query: 577 g 577 | Sbjct: 43 g 43
>gb|AC012654.2|F14O23 Arabidopsis thaliana chromosome 1 BAC F14O23 sequence, complete sequence Length = 98471 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 426 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 80974 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 80915 Query: 427 cggtgacccctgcgtgcacagcagcgccac 456 ||||| || |||||||| |||| |||||| Sbjct: 80914 tggtgatccttgcgtgcatagcaacgccac 80885
>gb|BC006359.2| Homo sapiens internexin neuronal intermediate filament protein, alpha, mRNA (cDNA clone MGC:12702 IMAGE:4125949), complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagca 392 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>ref|XM_463808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1868 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 cacctggatcagcgcctccaccttgtgct 482 |||| |||||||||||||||||| ||||| Sbjct: 1043 cacccggatcagcgcctccacctcgtgct 1015
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 gtcgccctccagcatcctcaccacctccg 407 |||||||||||||||||||| | |||||| Sbjct: 1803 gtcgccctccagcatcctcagcgcctccg 1775
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 508 gtccaccagcatctccaccttcttc 532 ||||||||||||| ||||||||||| Sbjct: 312902 gtccaccagcatcaccaccttcttc 312878
>dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene for SERK family receptor-like protein kinase, partial cds Length = 5675 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttggg 417 |||||||||||||||||| ||||||||| Sbjct: 2044 agcatcctcaccacctccaccatcttggg 2016
>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence Length = 166892 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 tccaccttctgccactcctcc 361 ||||||||||||||||||||| Sbjct: 148192 tccaccttctgccactcctcc 148212
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 gtcgccctccagcatcctcaccacctccg 407 |||||||||||||||||||| | |||||| Sbjct: 74946 gtcgccctccagcatcctcagcgcctccg 74918
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 ccgcctcctgccggaccacct 341 ||||||||||||||||||||| Sbjct: 103838 ccgcctcctgccggaccacct 103858
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 cacctggatcagcgcctccaccttgtgct 482 |||| |||||||||||||||||| ||||| Sbjct: 30536 cacccggatcagcgcctccacctcgtgct 30564
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 454 cacctggatcagcgcctccaccttgtgct 482 |||| |||||||||||||||||| ||||| Sbjct: 33101 cacccggatcagcgcctccacctcgtgct 33129
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 389 agcatcctcaccacctccgacatcttggg 417 |||||||||||||||||| ||||||||| Sbjct: 4825 agcatcctcaccacctccaccatcttggg 4797
>dbj|AK120063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K22, full insert sequence Length = 1867 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 454 cacctggatcagcgcctccaccttgtgct 482 |||| |||||||||||||||||| ||||| Sbjct: 1041 cacccggatcagcgcctccacctcgtgct 1013
>gb|U93048.1|DCU93048 Daucus carota somatic embryogenesis receptor-like kinase mRNA, complete cds Length = 1755 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 499 caggtccgggtccaccagcatctccaccttcttctctttca 539 |||||| || || ||||||||||||| ||| |||||||||| Sbjct: 1434 caggtcaggatcgaccagcatctccaactttttctctttca 1394
>dbj|D32045.1|RATGENOME Rat gene for alpha 1B adrenergic receptor, promoter region and partial cds Length = 2387 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 ctcctcccagcgctccgccagcccg 379 |||||||||||| |||||||||||| Sbjct: 1322 ctcctcccagcgttccgccagcccg 1346
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tcgccctccagcatcctcaccacc 403 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>ref|XM_361443.1| Magnaporthe grisea 70-15 hypothetical protein (MG03917.4) partial mRNA Length = 4320 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ccagcccgtcgccctccagc 391 |||||||||||||||||||| Sbjct: 1015 ccagcccgtcgccctccagc 996
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 gagccagctccgcctcctgccgga 335 ||||||||||||| |||||||||| Sbjct: 2284559 gagccagctccgcttcctgccgga 2284536
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctgccactcctcccagc 365 |||||||||||||||||||| Sbjct: 134441 cttctgccactcctcccagc 134422
>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence Length = 209257 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tctccaccttcttctctttc 538 |||||||||||||||||||| Sbjct: 93420 tctccaccttcttctctttc 93401
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tctccaccttcttctctttc 538 |||||||||||||||||||| Sbjct: 57205 tctccaccttcttctctttc 57186
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 367 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 414 |||||| ||||| || || ||||||||||| ||||| || |||||||| Sbjct: 116521 ctccgcaagcccatctccttccagcatcctaaccacttctgacatctt 116474
>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene cluster, complete sequence Length = 38146 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cagctccgcctcctgccgga 335 |||||||||||||||||||| Sbjct: 30386 cagctccgcctcctgccgga 30405
>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence Length = 186045 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 ccaccttctgccactcctcc 361 |||||||||||||||||||| Sbjct: 67005 ccaccttctgccactcctcc 67024
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete sequence Length = 205281 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ggactctgtctgtcatcatg 158 |||||||||||||||||||| Sbjct: 169143 ggactctgtctgtcatcatg 169124
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tctccaccttcttctctttc 538 |||||||||||||||||||| Sbjct: 35060 tctccaccttcttctctttc 35041
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 ccaccttctgccactcctcccagc 365 |||||||||||| ||||||||||| Sbjct: 247937 ccaccttctgcccctcctcccagc 247914
>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster Length = 32668 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cagctccgcctcctgccgga 335 |||||||||||||||||||| Sbjct: 6107 cagctccgcctcctgccgga 6088
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 cttctgccactcctcccagc 365 |||||||||||||||||||| Sbjct: 32187 cttctgccactcctcccagc 32206
>ref|NM_170528.2| Drosophila melanogaster CG31012-RD, transcript variant D (CG31012), mRNA Length = 2801 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gtccaccagcatctccacct 527 |||||||||||||||||||| Sbjct: 239 gtccaccagcatctccacct 258
>ref|NM_170526.2| Drosophila melanogaster CG31012-RC, transcript variant C (CG31012), mRNA Length = 3800 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gtccaccagcatctccacct 527 |||||||||||||||||||| Sbjct: 1238 gtccaccagcatctccacct 1257
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 cagcagcgccacctggatcagcgc 468 |||||||| ||||||||||||||| Sbjct: 1286681 cagcagcggcacctggatcagcgc 1286658
>gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, complete sequence Length = 128624 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 agctagaaattctgcaacgagggg 192 |||||||||||||| ||||||||| Sbjct: 101989 agctagaaattctgaaacgagggg 102012
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 tcgccctccagcatcctcaccacc 403 ||||||||||||||| |||||||| Sbjct: 2160859 tcgccctccagcatcttcaccacc 2160882
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gtccaccagcatctccacct 527 |||||||||||||||||||| Sbjct: 130558 gtccaccagcatctccacct 130577
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cttctgccactcctcccagc 365 |||||||||||||||||||| Sbjct: 104709 cttctgccactcctcccagc 104690
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 364 gcgctccgccagcccgtcgccctccagc 391 ||||||| |||||||||||| ||||||| Sbjct: 3745076 gcgctccaccagcccgtcgcgctccagc 3745103
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 tctccaccttcttctctttc 538 |||||||||||||||||||| Sbjct: 16936 tctccaccttcttctctttc 16955
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ccagcatcctcaccacctcc 406 |||||||||||||||||||| Sbjct: 2270008 ccagcatcctcaccacctcc 2269989
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 tcgccctccagcatcctcaccacc 403 ||||||||||||||| |||||||| Sbjct: 28761 tcgccctccagcatcttcaccacc 28784
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 tcgccctccagcatcctcaccacc 403 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 tcgccctccagcatcctcaccacc 403 ||||||||||||||| |||||||| Sbjct: 116652 tcgccctccagcatcttcaccacc 116675
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gtccaccagcatctccacct 527 |||||||||||||||||||| Sbjct: 147213 gtccaccagcatctccacct 147232
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cagctccgcctcctgccgga 335 |||||||||||||||||||| Sbjct: 42630 cagctccgcctcctgccgga 42649
>gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, complete sequence Length = 188522 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccagctccgcctcctgccgg 334 |||||||||||||||||||| Sbjct: 92333 ccagctccgcctcctgccgg 92314
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tctccaccttcttctctttc 538 |||||||||||||||||||| Sbjct: 124045 tctccaccttcttctctttc 124026
>gb|AF384969.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 2 (SERK2) mRNA, complete cds Length = 1887 Score = 40.1 bits (20), Expect = 7.8 Identities = 50/60 (83%) Strand = Plus / Minus Query: 496 ctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcaccca 555 |||||| || || ||||| |||||||||| |||||||| |||| || ||||||||||| Sbjct: 1629 ctgcagatcaggatccacaagcatctccagtttcttctccttcaaaagtcctttcaccca 1570
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 caccttcttctctttcagca 542 |||||||||||||||||||| Sbjct: 67460 caccttcttctctttcagca 67441
>gb|U59415.1|CHU59415 Clostridium hungatei nitrogenase 3 subunit H (anfH) gene, partial cds, subunit D (anfD) and G (anfG) genes, complete cds, and subunit K (anfK) gene, partial cds Length = 3070 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 cttctctttcagcagccctt 548 |||||||||||||||||||| Sbjct: 2467 cttctctttcagcagccctt 2448
>emb|AL163636.7|CNS01RIK Human chromosome 14 DNA sequence BAC R-903H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202337 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 tccaccttcttctctttcag 540 |||||||||||||||||||| Sbjct: 72311 tccaccttcttctctttcag 72292
>gb|M23528.1|AVINIFHDGK A.vinelandii nitrogenase 3 (anf) subunits H,D,G,K genes, complete cds, and ORFs Length = 6108 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 cttctctttcagcagccctt 548 |||||||||||||||||||| Sbjct: 3474 cttctctttcagcagccctt 3455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,475,442 Number of Sequences: 3902068 Number of extensions: 5475442 Number of successful extensions: 135543 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 134403 Number of HSP's gapped (non-prelim): 1132 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
