| Clone Name | rbaal32b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009426.1| Triticum aestivum clone wlmk1.pk0023.a8:fis, full insert mRNA sequence Length = 2298 Score = 771 bits (389), Expect = 0.0 Identities = 493/529 (93%), Gaps = 8/529 (1%) Strand = Plus / Minus Query: 186 tctgtctgtcatcatgtacaaaagagagctagaaattctgcaacgaggggctgtccggag 245 |||||| |||||||||||||||||||||||| |||||||| ||||||| |||| | |||| Sbjct: 2116 tctgtcggtcatcatgtacaaaagagagctaaaaattctgaaacgaggcgctgcctggag 2057 Query: 246 cct------caggagacggttttgttttcttcannnnnnncctgttacctcgggccggac 299 | | ||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 2056 cttgtcgatcaggagacgattttgttttgttc--ttttttcctgttacctcgggccggac 1999 Query: 300 agctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgtcgcggagcc 359 ||||||||||||||||||||| | ||||||||||||||||||||||||| |||||| ||| Sbjct: 1998 agctccaccgcccggaggttgtaggtggagtcgacgatccagtcgttgtttcgcggggcc 1939 Query: 360 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1938 agctccgcctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagc 1879 Query: 420 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccc 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1878 ccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggcgacccc 1819 Query: 480 tgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacgctc 539 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1818 tgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacgatg 1759 Query: 540 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccag 599 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1758 tgcaggtccgggtcctccagcatctccacattcttctctttcagcagccctttcacccag 1699 Query: 600 tcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcca 659 ||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 1698 tcaagcagcatgacatcgtcgtcgtttgcaagacgtgcaaggtcaaatgccctctgtcca 1639 Query: 660 gtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1638 gtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 1590
>emb|AJ277702.1|ZMA277702 Zea mays mRNA for SERK1 protein Length = 2068 Score = 476 bits (240), Expect = e-131 Identities = 378/424 (89%) Strand = Plus / Minus Query: 285 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 344 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 1877 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 1818 Query: 345 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 404 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 1817 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 1758 Query: 405 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 464 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1757 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 1698 Query: 465 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 524 |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 1697 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 1638 Query: 525 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 584 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 1637 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 1578 Query: 585 agccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtca 644 ||| | |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct: 1577 agcgccttcacccagtcaaggagcatgacgtcgtcatcgttcgcgagacgagcgaggtcg 1518 Query: 645 aacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtc 704 ||||||||||| || ||||| || ||||| |||||||| ||||| ||||| || |||||| Sbjct: 1517 aacgccctctgcccggtgatgagttccaggagcatgatcccgtagccgaagacgtccgtc 1458 Query: 705 ttct 708 |||| Sbjct: 1457 ttct 1454
>ref|XM_472733.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1887 Score = 462 bits (233), Expect = e-127 Identities = 377/425 (88%) Strand = Plus / Minus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 1887 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1828 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1827 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1768 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1708 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1707 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1648 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1647 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1588 Query: 584 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 643 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1587 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1528 Query: 644 aaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgt 703 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct: 1527 aaatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagt 1468 Query: 704 cttct 708 ||||| Sbjct: 1467 cttct 1463
>dbj|AK099777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095F19, full insert sequence Length = 2296 Score = 462 bits (233), Expect = e-127 Identities = 377/425 (88%) Strand = Plus / Minus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2089 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 2030 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2029 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 1970 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1969 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1910 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1909 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1850 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1849 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1790 Query: 584 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 643 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1789 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1730 Query: 644 aaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgt 703 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct: 1729 aaatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagt 1670 Query: 704 cttct 708 ||||| Sbjct: 1669 cttct 1665
>dbj|AK105892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-E09, full insert sequence Length = 1161 Score = 462 bits (233), Expect = e-127 Identities = 377/425 (88%) Strand = Plus / Minus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 584 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 643 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 532 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 473 Query: 644 aaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgt 703 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct: 472 aaatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagt 413 Query: 704 cttct 708 ||||| Sbjct: 412 cttct 408
>dbj|AK061767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-B11, full insert sequence Length = 1161 Score = 462 bits (233), Expect = e-127 Identities = 377/425 (88%) Strand = Plus / Minus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 832 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 773 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 713 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 653 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 652 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 593 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 533 Query: 584 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 643 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 532 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 473 Query: 644 aaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgt 703 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct: 472 aaatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagt 413 Query: 704 cttct 708 ||||| Sbjct: 412 cttct 408
>gb|AY652735.1| Oryza sativa (japonica cultivar-group) somatic embryogenesis protein kinase 1 mRNA, complete cds Length = 2380 Score = 454 bits (229), Expect = e-124 Identities = 376/425 (88%) Strand = Plus / Minus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 2007 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 1948 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1947 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttttgccactcctc 1888 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1887 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 1828 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 1827 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 1768 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1767 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 1708 Query: 584 cagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtc 643 |||||||||||||| || |||| ||| ||||| || || || |||||||| || || || Sbjct: 1707 gagccctttcacccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatc 1648 Query: 644 aaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgt 703 ||| ||||| ||||| || || ||||| ||||||||||| || || || |||||||| || Sbjct: 1647 aaatgccctttgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagt 1588 Query: 704 cttct 708 ||||| Sbjct: 1587 cttct 1583
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 414 bits (209), Expect = e-112 Identities = 287/313 (91%) Strand = Plus / Plus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 51112 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 51171 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51172 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 51231 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51232 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 51291 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 51292 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 51351 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51352 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 51411 Query: 584 cagccctttcacc 596 |||||||||||| Sbjct: 51412 gagccctttcacc 51424 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||| || |||| ||| ||||| || || || |||||||| || || ||||| ||||| Sbjct: 51781 acccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatcaaatgccctt 51840 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||| || || ||||| ||||||||||| || || || |||||||| ||||||| Sbjct: 51841 tgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtcttct 51895
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 414 bits (209), Expect = e-112 Identities = 287/313 (91%) Strand = Plus / Plus Query: 284 ttacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtc 343 ||||||||||||||||||||||| |||||||| ||| | || ||||||||||||||||| Sbjct: 22842337 ttacctcgggccggacagctccattgcccggagattgtaggtcgagtcgacgatccagtc 22842396 Query: 344 gttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctc 403 |||||| || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842397 gttgtggcggggggccagctccgcctcctgccggaccacctccaccttctgccactcctc 22842456 Query: 404 ccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccg 463 ||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842457 ccaccgctccgcgaggccatcgccctccagcatcctcaccacctccgacatcttgggccg 22842516 Query: 464 gtccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtg 523 ||||||||| || ||||||||||| ||||| ||||||||||| || | ||||||||| || Sbjct: 22842517 gtccatcggggagccctgcgtgcagagcagagccacctggatgagtgactccacctcatg 22842576 Query: 524 ctccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcag 583 ||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 22842577 ctccacgaagccgctctggaggtccgggtccaccagcatctccaccttcttctctttcag 22842636 Query: 584 cagccctttcacc 596 |||||||||||| Sbjct: 22842637 gagccctttcacc 22842649 Score = 54.0 bits (27), Expect = 6e-04 Identities = 93/115 (80%) Strand = Plus / Plus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||| || |||| ||| ||||| || || || |||||||| || || ||||| ||||| Sbjct: 22843006 acccaatcgagcaacatcacatcatcatcgtttgcaagacgagcaagatcaaatgccctt 22843065 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||| || || ||||| ||||||||||| || || || |||||||| ||||||| Sbjct: 22843066 tgtcctgtaatgagctcaagaagcatgattccatagccaaaaacatcagtcttct 22843120
>emb|AJ400868.1|ZMA400868 Zea mays serk1 gene for somatic embryogenesis receptor-like kinase 1, exons 1-11 Length = 5715 Score = 381 bits (192), Expect = e-102 Identities = 282/312 (90%) Strand = Plus / Minus Query: 285 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 344 ||||||||||||||||| || || |||| ||||||| | ||||||||||||||||||||| Sbjct: 4993 tacctcgggccggacagttcgacggccctgaggttgtaggtggagtcgacgatccagtcg 4934 Query: 345 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 404 ||||| ||||| || ||||||||||||||||| | |||||||||||||||||||| |||| Sbjct: 4933 ttgtggcgcggggcgagctccgcctcctgccgcatcacctccaccttctgccactgctcc 4874 Query: 405 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 464 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 4873 caccgctccgccagcccgtcgccctccagcatccgcgccacctccgacatcttgggccgc 4814 Query: 465 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 524 |||||||| || |||||||||||||||||||||||||||||||||| ||||||||| || Sbjct: 4813 tccatcggggagccctgcgtgcacagcagcgccacctggatcagcgactccacctcctgg 4754 Query: 525 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 584 ||||||||| || |||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 4753 tccacgtaccggccctgcaggtccgggtccaccagctgctccagcttcttctccttcagc 4694 Query: 585 agccctttcacc 596 ||| | |||||| Sbjct: 4693 agcgccttcacc 4682 Score = 101 bits (51), Expect = 3e-18 Identities = 99/115 (86%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||||||| Sbjct: 4538 acccagtcaaggagcatgacgtcgtcatcgttcgcgagacgagcgaggtcgaacgccctc 4479 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 || || ||||| || ||||| |||||||| ||||| ||||| || |||||||||| Sbjct: 4478 tgcccggtgatgagttccaggagcatgatcccgtagccgaagacgtccgtcttct 4424
>emb|AJ277703.1|ZMA277703 Zea mays mRNA for SERK2 protein Length = 2077 Score = 309 bits (156), Expect = 7e-81 Identities = 357/424 (84%) Strand = Plus / Minus Query: 285 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 344 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 1886 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 1827 Query: 345 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 404 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 1826 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1767 Query: 405 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 464 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1766 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1707 Query: 465 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 524 |||| || || ||||||||||| || || |||||||| || || |||||||||| | Sbjct: 1706 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 1647 Query: 525 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 584 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 1646 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 1587 Query: 585 agccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtca 644 || ||||||||||||||||| ||||| |||||||| ||||| |||||||| || || ||| Sbjct: 1586 agtcctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatca 1527 Query: 645 aacgccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtc 704 || |||||||| ||||| |||||||||||||||||||| || || || |||||||| ||| Sbjct: 1526 aatgccctctggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtc 1467 Query: 705 ttct 708 |||| Sbjct: 1466 ttct 1463
>gb|BT009223.1| Triticum aestivum clone wle1n.pk0076.d4:fis, full insert mRNA sequence Length = 1651 Score = 289 bits (146), Expect = 6e-75 Identities = 350/418 (83%) Strand = Plus / Minus Query: 291 gggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcgttgtgt 350 ||||| ||||| ||||| || |||||||| | |||||||| || |||||||||||| | Sbjct: 1368 gggccagacagttccacggcgcggaggttatatgtggagtcaacaatccagtcgttgcga 1309 Query: 351 cgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcccagcgc 410 | ||||||| ||| |||||||||| ||||||||||||||||||||| |||||||| | | Sbjct: 1308 agaggagccaactctgcctcctgcctgaccacctccaccttctgccattcctcccatctc 1249 Query: 411 tccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccatc 470 || |||| ||||| || |||||||||||||| ||||||||||||||||| || |||| Sbjct: 1248 tctgccaagccgtcaccttccagcatcctcacgacctccgacatcttggggcgctccact 1189 Query: 471 ggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacg 530 || || |||||||||||||||||||| ||||||||||| | ||||||||| ||| | Sbjct: 1188 ggcgagccctgcgtgcacagcagcgctacctggatcagagattccacctcggtctcttca 1129 Query: 531 tacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccct 590 || |||||||| ||| ||||||||||||||||| || || ||||| |||| || ||| Sbjct: 1128 tagttgctctgcaagtctgggtccaccagcatctcaacttttttctccttcaacaatcct 1069 Query: 591 ttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgcc 650 |||||||||||||| ||||| |||||||| ||||| ||||| || || || ||||| ||| Sbjct: 1068 ttcacccagtcaagaagcataacatcgtcatcatttgcaaggcgagcaagatcaaatgcc 1009 Query: 651 ctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||| ||||| |||||||||||||| |||| ||||| ||||||||||| ||||||| Sbjct: 1008 ctctgcccagtaataagctccagaagtgtgattccgtagccgaaaacatcagtcttct 951
>emb|AJ400869.1|ZMA400869 Zea mays serk2 gene for somatic embryogenesis receptor-like kinase 2, exons 1-11 Length = 5484 Score = 206 bits (104), Expect = 7e-50 Identities = 260/312 (83%) Strand = Plus / Minus Query: 285 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 344 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 5019 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 4960 Query: 345 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 404 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 4959 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 4900 Query: 405 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 464 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 4899 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 4840 Query: 465 tccatcggtgacccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgc 524 |||| || || ||||||||||| || || |||||||| || || |||||||||| | Sbjct: 4839 tccaggggggagccctgcgtgcagaggagtgccacctgaataaggctctccacctcgacc 4780 Query: 525 tccacgtacacgctctgcaggtccgggtccaccagcatctccaccttcttctctttcagc 584 ||| |||| | ||||||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 4779 tcctcgtaggctttctgcagatctgggtccaccagcatctccaccttcttctccttcaac 4720 Query: 585 agccctttcacc 596 || ||||||||| Sbjct: 4719 agtcctttcacc 4708 Score = 109 bits (55), Expect = 1e-20 Identities = 100/115 (86%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||||||||| ||||| |||||||| ||||| |||||||| || || ||||| |||||| Sbjct: 4317 acccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaatgccctc 4258 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 || ||||| |||||||||||||||||||| || || || |||||||| ||||||| Sbjct: 4257 tggccagtaataagctccagaagcatgatcccatagccaaaaacatcagtcttct 4203
>emb|AJ400870.1|ZMA400870 Zea mays partial mRNA for somatic embryogenesis receptor-like kinase 3, (serk3 gene) Length = 1622 Score = 170 bits (86), Expect = 4e-39 Identities = 194/230 (84%) Strand = Plus / Minus Query: 477 ccctgcgtgcacagcagcgccacctggatcagcgcctccacctcgtgctccacgtacacg 536 ||||||||||| || || ||||||||||| || |||||||||| |||| |||| | Sbjct: 1616 ccctgcgtgcagaggagtgccacctggataaggttctccacctcgatctcctcgtaggca 1557 Query: 537 ctctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacc 596 |||| || || |||||||||| |||||||||||| ||||| |||||||| ||||||||| Sbjct: 1556 ttctgtagatctgggtccaccaacatctccacctttttctccttcagcagtcctttcacc 1497 Query: 597 cagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgt 656 |||||||| ||||| ||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct: 1496 cagtcaagaagcataacatcatcatcatttgcaagacgagctagatcaaatgccctctgt 1437 Query: 657 ccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtctt 706 ||||| |||||||||||||||||||| || || || |||||||| ||||| Sbjct: 1436 ccagtaataagctccagaagcatgatcccatatccaaaaacatcggtctt 1387
>gb|AY110115.1| Zea mays CL444_1 mRNA sequence Length = 2474 Score = 163 bits (82), Expect = 1e-36 Identities = 184/218 (84%) Strand = Plus / Minus Query: 285 tacctcgggccggacagctccaccgcccggaggttgaaagtggagtcgacgatccagtcg 344 ||||| ||||||||||||||||| || || |||||| | ||||| |||||||||||||| Sbjct: 2114 taccttgggccggacagctccacggcacgaaggttgtacgtggaatcgacgatccagtca 2055 Query: 345 ttgtgtcgcggagccagctccgcctcctgccggaccacctccaccttctgccactcctcc 404 ||| | |||| ||| ||| |||||||||| |||||||| || |||||||| || ||| Sbjct: 2054 ttgcggagcggtgccgactcagcctcctgcctcaccacctctactttctgccattcgtcc 1995 Query: 405 cagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccgg 464 || ||||| ||||||||||| || || |||||||||||||||||||||||||| || ||| Sbjct: 1994 caacgctctgccagcccgtcaccttcgagcatcctcaccacctccgacatctttggacgg 1935 Query: 465 tccatcggtgacccctgcgtgcacagcagcgccacctg 502 |||| ||| || ||||||||||| || || |||||||| Sbjct: 1934 tccaacggggagccctgcgtgcagaggagtgccacctg 1897 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 588 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 647 ||||||||||||||||| ||||| |||||||| ||||| |||||||| || || ||||| Sbjct: 1811 cctttcacccagtcaagaagcataacatcgtcatcatttgcaagacgagctagatcaaat 1752 Query: 648 gccctctgtccagtgataagctccagaagcatgat 682 |||||||| ||||| |||||||||||||||||||| Sbjct: 1751 gccctctggccagtaataagctccagaagcatgat 1717
>gb|AY791293.2| Cocos nucifera somatic embryogenesis receptor kinase mRNA, complete cds Length = 1890 Score = 123 bits (62), Expect = 8e-25 Identities = 257/322 (79%) Strand = Plus / Minus Query: 387 accttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcaccacc 446 ||||||||||| |||||||| | ||| || || || || || || ||||||||||||||| Sbjct: 1781 accttctgccattcctcccatctctcagcaaggccatcaccttcgagcatcctcaccacc 1722 Query: 447 tccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctggatc 506 || |||||||||||||| ||||| || || ||||| || || |||| | || ||||| Sbjct: 1721 tctgacatcttgggccgctccattggggagccctgggtacatagcaaagttacttggata 1662 Query: 507 agcgcctccacctcgtgctccacgtacacgctctgcaggtccgggtccaccagcatctcc 566 |||| ||||||||| |||||| || | ||| || |||||||| |||| ||| ||| Sbjct: 1661 agcgactccacctcagcctccacatagtcatcctggagatccgggtcgaccaacatgtcc 1602 Query: 567 accttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattc 626 | ||| |||||||||||||| ||||| ||||| || |||| ||||||||| || ||||| Sbjct: 1601 agctttttctctttcagcagtccttttacccaatccagcaacatgacatcatcatcattt 1542 Query: 627 gcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatgccg 686 ||||| | || ||||| || |||||||| || || ||||| |||| ||||||||| || Sbjct: 1541 gcaagcctggcaaggtcgaatgccctctggcctgtaataagttccaaaagcatgattcca 1482 Query: 687 taaccgaaaacatccgtcttct 708 || || |||||||| ||||||| Sbjct: 1481 tatccaaaaacatcagtcttct 1460
>dbj|AB115767.1| Citrus unshiu SERK mRNA for somatic embryogenesis receptor kinase 1, complete cds Length = 1866 Score = 121 bits (61), Expect = 3e-24 Identities = 253/317 (79%) Strand = Plus / Minus Query: 384 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 443 |||||||| |||||||| ||||| ||||| |||| || || || || ||||| || || Sbjct: 1763 tccaccttttgccactcatcccaccgctctgccaagccatcaccttcaagcattctaaca 1704 Query: 444 acctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccacctgg 503 || ||||||||||||||||||||||| || || || || ||||| |||| ||| |||||| Sbjct: 1703 acttccgacatcttgggccggtccataggggagccttgagtgcagagcaacgcaacctgg 1644 Query: 504 atcagcgcctccacctcgtgctccacgtacacgctctgcaggtccgggtccaccagcatc 563 || || ||||||||| ||||| || | |||| || || ||||| || ||||| Sbjct: 1643 ataagttgctccacctcagcttccacataattgttctggagatcagggtcaactagcatt 1584 Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 || | |||||| || ||||| || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1583 tctaacttcttttccttcagaagtcctttcacccaatcaagcagcatgacatcatcatca 1524 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || || ||||| || || ||||| || |||||||||||||| ||||| |||||||| || Sbjct: 1523 tttgccagacgagcaagatcaaaggctctctgtccagtgattagctctagaagcataatc 1464 Query: 684 ccgtaaccgaaaacatc 700 || ||||| || ||||| Sbjct: 1463 ccataaccaaagacatc 1447
>gb|AY162176.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) mRNA, complete cds Length = 2392 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Minus Query: 573 ttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgcaaga 632 ||||||||||| || ||||| ||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1822 ttctctttcagaagtccttttacccaatcaagcagcataacatcatcatcattcgcaagt 1763 Query: 633 cgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatgccgtaaccg 692 || || |||||||| || || |||||||| |||||||| ||||||||||| || ||||| Sbjct: 1762 cgagcaaggtcaaaagctctttgtccagttataagctcaagaagcatgataccataacca 1703 Query: 693 aaaacatc 700 |||||||| Sbjct: 1702 aaaacatc 1695 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 423 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 482 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 1972 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 1913 Query: 483 gtgcacagcagcgccacctggat 505 ||||| |||||||| |||||||| Sbjct: 1912 gtgcatagcagcgcaacctggat 1890
>ref|XM_469440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2503 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2227 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2168 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2167 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2111
>ref|XM_469439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2037 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 1978 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 1977 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 1921
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 95570 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 95629 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 95630 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 95686
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 27959842 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 27959901 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 27959902 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 27959958
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 65184 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 65125 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 65124 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 65068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 28051166 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 28051225 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 28051226 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 28051282
>dbj|AK111846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O14, full insert sequence Length = 2507 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||| || || || || |||||||||| Sbjct: 2231 cacctccacctgctgccactcctcccaccgctccgcgagtccttccccttccagcatccg 2172 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgc 496 ||||||||||||||| ||||||||| ||| ||| |||| |||||||||||||| Sbjct: 2171 caccacctccgacatggacggccggtcctccggcgacgcctgtgtgcacagcagcgc 2115
>ref|NM_119497.3| Arabidopsis thaliana BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE); kinase AT4G33430 (BAK1) mRNA, complete cds Length = 2579 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 570 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 629 ||||||||||| | || ||||||||||||||| || | ||||||||| || |||||||| Sbjct: 2033 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatcatcatcattcgcg 1974 Query: 630 agacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatga 681 || || || || ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1973 aggcgagcaagatcaaaagccctttgtccagtgataagctcaagaagcatga 1922
>gb|AF384970.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 3 (SERK3) mRNA, complete cds Length = 2507 Score = 95.6 bits (48), Expect = 2e-16 Identities = 96/112 (85%) Strand = Plus / Minus Query: 570 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 629 ||||||||||| | || ||||||||||||||| || | ||||||||| || |||||||| Sbjct: 2032 ttcttctcttttaacaaccctttcacccagtctagtaacatgacatcatcatcattcgcg 1973 Query: 630 agacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatga 681 || || || || ||||| ||||| ||||||||||||||||| |||||||||| Sbjct: 1972 aggcgagcaagatcaaaagccctttgtccagtgataagctcaagaagcatga 1921
>gb|AY162177.1| Medicago truncatula somatic embryogenesis receptor kinase 1 (SERK1) gene, complete cds Length = 4206 Score = 93.7 bits (47), Expect = 7e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||| ||||||||||| ||||| || ||||||||||| || || |||||||| || || Sbjct: 3717 acccaatcaagcagcataacatcatcatcattcgcaagtcgagcaaggtcaaaagctctt 3658 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||||| |||||||| ||||||||||| || ||||| |||||||| Sbjct: 3657 tgtccagttataagctcaagaagcatgataccataaccaaaaacatc 3611 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 423 tcgccctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgc 482 ||||| || ||||| ||||| || || |||||||| ||||||||||| || || || ||| Sbjct: 4002 tcgccttcaagcattctcactacatctgacatctttggccggtccataggcgaaccttgc 3943 Query: 483 gtgcacagcagcgccacctggat 505 ||||| |||||||| |||||||| Sbjct: 3942 gtgcatagcagcgcaacctggat 3920
>ref|NM_103144.3| Arabidopsis thaliana SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2); kinase AT1G34210 (SERK2) mRNA, complete cds Length = 3461 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Minus Query: 540 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccag 599 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||||| Sbjct: 2036 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcacccaa 1977 Query: 600 tcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcca 659 || || ||||| || || ||||||||||| || | ||| || ||||| || ||||| || Sbjct: 1976 tctaggagcataacgtcatcgtcattcgccagtcttgcaagatcaaaagctctctgacct 1917 Query: 660 gtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || || || |||| ||||||||| ||||| || |||||||| Sbjct: 1916 gtaatcagttccaaaagcatgatcccgtagccaaaaacatc 1876
>ref|XM_464966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2415 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 440 caccacctccgacat 454 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| ||||| || |||||||| Sbjct: 1676 aagctcaagaagcatgatcccgtagccaaaaacatc 1641
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 10639696 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 10639637 Query: 440 caccacctccgacat 454 |||||||| ||||| Sbjct: 10639636 aaccacctctgacat 10639622 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 402 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 461 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 30335181 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 30335240 Query: 462 c 462 | Sbjct: 30335241 c 30335241 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 cacctggatcagcgcctccacctcgtgct 525 |||| |||||||||||||||||||||||| Sbjct: 220561 cacccggatcagcgcctccacctcgtgct 220589 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ccgcctcctgccggaccacct 384 ||||||||||||||||||||| Sbjct: 24942555 ccgcctcctgccggaccacct 24942575 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| ||||| || |||||||| Sbjct: 10639314 aagctcaagaagcatgatcccgtagccaaaaacatc 10639279
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 57386 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 57327 Query: 440 caccacctccgacat 454 |||||||| ||||| Sbjct: 57326 aaccacctctgacat 57312 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| ||||| || |||||||| Sbjct: 57004 aagctcaagaagcatgatcccgtagccaaaaacatc 56969
>dbj|AK102120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084N08, full insert sequence Length = 2415 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 1961 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatccg 1902 Query: 440 caccacctccgacat 454 |||||||| ||||| Sbjct: 1901 aaccacctctgacat 1887 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| ||||| || |||||||| Sbjct: 1676 aagctcaagaagcatgatcccgtagccaaaaacatc 1641
>gb|AY104736.1| Zea mays PCO086463 mRNA sequence Length = 1810 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||| ||||| ||||| || |||||||||||||||||||| | ||| || || || |||| Sbjct: 1316 cctcttgccgtaccacttctaccttctgccactcctcccacctctcggcgagaccatcgc 1257 Query: 427 cctccagcatcctcaccacctccgacatcttgggccggtccatcggtgacccctgcgtgc 486 | || ||||||||||| |||||||||||||| || || ||||| || | ||| |||| Sbjct: 1256 cttcaagcatcctcacaacctccgacatcttaggacgttccatggggttgctctgagtgc 1197 Query: 487 acagcagcgccacctggatcagcgcctccacctcg 521 | || ||||||||||||||||| | ||||||||| Sbjct: 1196 agaggagcgccacctggatcagagattccacctcg 1162 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 570 ttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtcattcgca 629 |||||||| || |||| ||| || ||||||||||| ||||||||||| || ||||| ||| Sbjct: 1113 ttcttctccttgagcaaccccttgacccagtcaagaagcatgacatcatcatcattagca 1054 Query: 630 agacg 634 ||||| Sbjct: 1053 agacg 1049
>dbj|AK066118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055F13, full insert sequence Length = 2968 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcc 438 ||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||| Sbjct: 2476 cacctccacctgctgccactcctcccaccgctccgccagcccctcgccttctagcatcc 2418 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| ||||| || |||||||| Sbjct: 2191 aagctcaagaagcatgatcccgtagccaaaaacatc 2156
>ref|NM_105841.3| Arabidopsis thaliana SERK1 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1); kinase AT1G71830 (SERK1) mRNA, complete cds Length = 2565 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 560 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 619 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 620 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 679 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1956 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1897 Query: 680 gatgccgtaaccgaaaac 697 ||| ||||| |||||||| Sbjct: 1896 gattccgtatccgaaaac 1879 Score = 44.1 bits (22), Expect = 0.62 Identities = 73/90 (81%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 469 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 470 cggtgacccctgcgtgcacagcagcgccac 499 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>gb|AY048200.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 2462 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 560 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 619 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 2016 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1957 Query: 620 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 679 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1956 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1897 Query: 680 gatgccgtaaccgaaaac 697 ||| ||||| |||||||| Sbjct: 1896 gattccgtatccgaaaac 1879 Score = 44.1 bits (22), Expect = 0.62 Identities = 73/90 (81%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 469 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 2166 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 2107 Query: 470 cggtgacccctgcgtgcacagcagcgccac 499 ||||| || |||||||| |||| |||||| Sbjct: 2106 tggtgatccttgcgtgcatagcaacgccac 2077
>gb|BT002217.1| Arabidopsis thaliana At1g71830/F14O23_24 mRNA, complete cds Length = 1878 Score = 75.8 bits (38), Expect = 2e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 560 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 619 |||||| | ||||||||| |||| || ||||||||||||||||| | |||||| ||||| Sbjct: 1599 catctctagcttcttctccttcaacaatcctttcacccagtcaagtaacatgacgtcgtc 1540 Query: 620 gtcattcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcat 679 ||| || || || || ||||| || || || || ||||| ||||| || || |||||||| Sbjct: 1539 gtcgttagctagccgagcgagatcgaaagctctttgtcctgtgattagttctagaagcat 1480 Query: 680 gatgccgtaaccgaaaac 697 ||| ||||| |||||||| Sbjct: 1479 gattccgtatccgaaaac 1462 Score = 44.1 bits (22), Expect = 0.62 Identities = 73/90 (81%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 469 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 1749 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 1690 Query: 470 cggtgacccctgcgtgcacagcagcgccac 499 ||||| || |||||||| |||| |||||| Sbjct: 1689 tggtgatccttgcgtgcatagcaacgccac 1660
>ref|NM_126955.3| Arabidopsis thaliana ATSERK4; protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase AT2G13790 (ATSERK4) mRNA, complete cds Length = 2219 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1715 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1656 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1655 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1596 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1595 ccgtacccaaaaacatcagtcttct 1571
>ref|NM_126956.3| Arabidopsis thaliana ATSERK5; ATP binding / protein kinase/ transmembrane receptor protein serine/threonine kinase AT2G13800 (ATSERK5) mRNA, complete cds Length = 1985 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1519 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1460 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1459 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1400 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1399 ccgtacccaaaaacatcagtcttct 1375
>gb|AY056243.1| Arabidopsis thaliana unknown protein (At2g13780) mRNA, complete cds Length = 2070 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1598 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1539 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1538 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1479 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1478 ccgtacccaaaaacatcagtcttct 1454
>gb|AY094412.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds Length = 1965 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1503 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1444 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1443 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1384 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1383 ccgtacccaaaaacatcagtcttct 1359
>emb|BX820947.1|CNS0A8M0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH84ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1916 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1521 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1462 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1461 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1402 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1401 ccgtacccaaaaacatcagtcttct 1377
>gb|AY106186.1| Zea mays PCO110698 mRNA sequence Length = 611 Score = 73.8 bits (37), Expect = 7e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 380 cacctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcct 439 ||||||||||| ||||||||||||||| | ||| || || || |||||||||||||||| Sbjct: 355 cacctccacctgctgccactcctcccacctctcggcgaggccctcgccctccagcatccg 296 Query: 440 caccacctccgacatcttgggccggtccatcggtgacccctgcgtgcacagcagcgccac 499 |||||||| ||||| || |||||| || ||| |||||||||| |||||||| | Sbjct: 295 gaccacctcggacatggacgggcggtcctcgggcgacgcctgcgtgcagagcagcgcgat 236 Query: 500 ctggatcagcgcctccacctc 520 |||||||| | ||||||||| Sbjct: 235 ctggatcatcatctccacctc 215
>gb|BT001116.1| Arabidopsis thaliana At2g13800/F13J11.15 mRNA, complete cds Length = 1455 Score = 73.8 bits (37), Expect = 7e-10 Identities = 118/145 (81%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtcgtca 623 |||| |||||||||||||| | | ||||||||||||| || | ||||| ||| || ||| Sbjct: 1163 tccaacttcttctctttcaaaacctctttcacccagtcgagtaacatgatatcatcatca 1104 Query: 624 ttcgcaagacgtgcgaggtcaaacgccctctgtccagtgataagctccagaagcatgatg 683 || ||||| || || || || || ||| | ||||||||||| ||||| |||||||||| Sbjct: 1103 tttgcaagccgagcaagatcgaaagccttttgtccagtgatgagctcgagaagcatgacc 1044 Query: 684 ccgtaaccgaaaacatccgtcttct 708 ||||| || |||||||| ||||||| Sbjct: 1043 ccgtacccaaaaacatcagtcttct 1019
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 |||||||| || | ||||||||| || |||||||| || || || || ||||| ||||| Sbjct: 115146 acccagtctagtaacatgacatcatcatcattcgcgaggcgagcaagatcaaaagccctt 115205 Query: 654 tgtccagtgataagctccagaagcatga 681 ||||||||||||||||| |||||||||| Sbjct: 115206 tgtccagtgataagctcaagaagcatga 115233
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 71.9 bits (36), Expect = 3e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 |||||||| || | ||||||||| || |||||||| || || || || ||||| ||||| Sbjct: 50367 acccagtctagtaacatgacatcatcatcattcgcgaggcgagcaagatcaaaagccctt 50426 Query: 654 tgtccagtgataagctccagaagcatga 681 ||||||||||||||||| |||||||||| Sbjct: 50427 tgtccagtgataagctcaagaagcatga 50454
>gb|AY108393.1| Zea mays PCO126676 mRNA sequence Length = 564 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Minus Query: 384 tccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctcacc 443 ||||| |||||| || ||||||| | ||| || |||||||| |||||||||||||| | | Sbjct: 277 tccacgttctgcgacgcctcccatctctcggcgagcccgtccccctccagcatcctgatc 218 Query: 444 acctccgacatcttgggccggt 465 ||||| |||||| ||||||||| Sbjct: 217 acctcggacatcctgggccggt 196
>gb|AF384969.1| Arabidopsis thaliana somatic embryogenesis receptor-like kinase 2 (SERK2) mRNA, complete cds Length = 1887 Score = 67.9 bits (34), Expect = 4e-08 Identities = 130/162 (80%) Strand = Plus / Minus Query: 539 ctgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcaccca 598 |||||| || || ||||| |||||||||| |||||||| |||| || ||||||||||| Sbjct: 1629 ctgcagatcaggatccacaagcatctccagtttcttctccttcaaaagtcctttcaccca 1570 Query: 599 gtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtcc 658 || || ||||| || || ||||||||||| || | ||| || ||||| || || || || Sbjct: 1569 atctaggagcataacgtcatcgtcattcgccagtcttgcaagatcaaaagctctttgacc 1510 Query: 659 agtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || || || |||| ||||||||| ||||| ||||||||||| Sbjct: 1509 tgtaatcagttccaaaagcatgatcccgtagccgaaaacatc 1468
>dbj|AP006424.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT13E04, TM0314, complete sequence Length = 126349 Score = 65.9 bits (33), Expect = 2e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||| || |||| ||| ||||| |||||||| ||||||||||| || || || |||||| Sbjct: 37927 acccaatcgagcaacatcacatcatcgtcattggcaagacgtgctagatcgaaagccctc 37868 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtctt 706 |||||||| || || || |||||||| | ||||| || |||||||| ||||| Sbjct: 37867 tgtccagttattagttcaagaagcatcactccgtatccaaaaacatcagtctt 37815
>ref|XM_480326.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4009 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4354825 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4354766 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 4354765 cttcaagcatcctcaccacctccgccatctt 4354735 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 4343521 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 4343462 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 4343461 cttcaagcatcctcacaacctccgccatcttggg 4343428 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 21571634 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 21571682 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 |||||||| || ||||||||||| || ||||| || ||||| || |||||||| || | Sbjct: 4343024 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 4342965 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 4342964 tgtcctgttataagctccaaaagcataatcccataaccaaatacatc 4342918 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttggg 460 |||||||||||||||||| ||||||||| Sbjct: 4438935 agcatcctcaccacctccaccatcttggg 4438907
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 117619 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 117560 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 117559 cttcaagcatcctcaccacctccgccatctt 117529 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 106315 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 106256 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 106255 cttcaagcatcctcacaacctccgccatcttggg 106222 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 |||||||| || ||||||||||| || ||||| || ||||| || |||||||| || | Sbjct: 105818 acccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaaggcacgt 105759 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 105758 tgtcctgttataagctccaaaagcataatcccataaccaaatacatc 105712
>dbj|AP003882.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1134_B10 Length = 115074 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2001 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1942 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 1941 cttcaagcatcctcaccacctccgccatctt 1911 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttggg 460 |||||||||||||||||| ||||||||| Sbjct: 86111 agcatcctcaccacctccaccatcttggg 86083
>dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L06, full insert sequence Length = 4009 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 3813 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 3754 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 3753 cttcaagcatcctcaccacctccgccatctt 3723
>dbj|AK060589.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C11, full insert sequence Length = 1782 Score = 61.9 bits (31), Expect = 3e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1559 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1500 Query: 427 cctccagcatcctcaccacctccgacatctt 457 | || ||||||||||||||||||| |||||| Sbjct: 1499 cttcaagcatcctcaccacctccgccatctt 1469
>ref|XM_480325.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 588 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 647 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1853 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1794 Query: 648 gccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || | ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 1793 gcacgttgtcctgttataagctccaaaagcataatcccataaccaaatacatc 1741
>gb|AY463361.1| Oryza sativa (indica cultivar-group) benzothiadiazole-induced somatic embryogenesis receptor kinase 1 (BISERK1) mRNA, complete cds Length = 2351 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 1892 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1833 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 1832 cttcaagcatcctcacaacctccgccatcttggg 1799 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 588 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 647 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1671 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1612 Query: 648 gccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || | ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 1611 gcacgttgtcctgttataagctccaaaagcataatcccataaccaaatacatc 1559
>dbj|AB188247.1| Oryza sativa (japonica cultivar-group) OsSERK1 mRNA for SERK-family receptor-like protein kinase, complete cds Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2019 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 1960 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 1959 cttcaagcatcctcacaacctccgccatcttggg 1926 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 588 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 647 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1798 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1739 Query: 648 gccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || | ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 1738 gcacgttgtcctgttataagctccaaaagcataatcccataaccaaatacatc 1686
>dbj|AK103038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E16, full insert sequence Length = 2674 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Minus Query: 367 cctcctgccggaccacctccaccttctgccactcctcccagcgctccgccagcccgtcgc 426 |||||||||| || || || | |||||||||||||||||| | ||| || || || || | Sbjct: 2074 cctcctgccgtactacttctatcttctgccactcctcccatctctcggcaaggccatcac 2015 Query: 427 cctccagcatcctcaccacctccgacatcttggg 460 | || ||||||||||| ||||||| ||||||||| Sbjct: 2014 cttcaagcatcctcacaacctccgccatcttggg 1981 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 588 cctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaac 647 ||||| |||||||| || ||||||||||| || ||||| || ||||| || |||||||| Sbjct: 1853 ccttttacccagtccagtagcatgacatcatcatcattggctagacgagcaaggtcaaag 1794 Query: 648 gccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 || | ||||| || |||||||||| |||||| || || ||||| || ||||| Sbjct: 1793 gcacgttgtcctgttataagctccaaaagcataatcccataaccaaatacatc 1741
>ref|XM_482638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>ref|XM_482637.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2158 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>ref|XM_482636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1167 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1215
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 402 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 461 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 16041 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 16100 Query: 462 c 462 | Sbjct: 16101 c 16101
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 402 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 461 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 136098 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 136157 Query: 462 c 462 | Sbjct: 136158 c 136158
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0708B04 Length = 170523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 31808 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 31856
>dbj|AK111984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F05, full insert sequence Length = 2158 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1311 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1263
>dbj|AK111772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067P10, full insert sequence Length = 2671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 417 agcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 |||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1960 agcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1912
>dbj|AK073972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072J21, full insert sequence Length = 2639 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 402 tcccagcgctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggc 461 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||||| ||||| Sbjct: 2092 tcccaccgctctgccagtccatctccctccagcatcctgaccacctctgacatcctgggc 2033 Query: 462 c 462 | Sbjct: 2032 c 2032
>gb|AC007454.3|F23M19 Arabidopsis thaliana chromosome 1 BAC F23M19 sequence, complete sequence Length = 88401 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 540 tgcaggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacc 596 |||||||| || ||||| |||||||||| ||||||||| |||| |||||||||||| Sbjct: 72334 tgcaggtcaggatccacaagcatctccagcttcttctccttcaaaagccctttcacc 72390
>emb|BX820053.1|CNS0AA0J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZA06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2064 Score = 56.0 bits (28), Expect = 2e-04 Identities = 97/120 (80%) Strand = Plus / Minus Query: 589 ctttcacccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacg 648 |||||||||||| || | ||||| ||| || ||||| ||||| || || || || || | Sbjct: 1692 ctttcacccagttgagtaacatgatatcatcatcatttgcaagccgagcaagatcgaaag 1633 Query: 649 ccctctgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 || | ||||||||||| ||||| |||||||||| ||||| || |||||||| ||||||| Sbjct: 1632 ccttttgtccagtgatgagctcgagaagcatgaccccgtacccaaaaacatcagtcttct 1573
>gb|AC012654.2|F14O23 Arabidopsis thaliana chromosome 1 BAC F14O23 sequence, complete sequence Length = 98471 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 594 acccagtcaagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctc 653 ||||||||||| | |||||| |||||||| || || || || ||||| || || || || Sbjct: 80704 acccagtcaagtaacatgacgtcgtcgtcgttagctagccgagcgagatcgaaagctctt 80645 Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaac 697 ||||| ||||| || || ||||||||||| ||||| |||||||| Sbjct: 80644 tgtcctgtgattagttctagaagcatgattccgtatccgaaaac 80601 Score = 44.1 bits (22), Expect = 0.62 Identities = 73/90 (81%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 469 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 80974 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 80915 Query: 470 cggtgacccctgcgtgcacagcagcgccac 499 ||||| || |||||||| |||| |||||| Sbjct: 80914 tggtgatccttgcgtgcatagcaacgccac 80885
>dbj|AK105576.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-D11, full insert sequence Length = 1432 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 418 gcccgtcgccctccagcatcctcaccacctccgacatcttgggccggt 465 ||||||| ||||||||||||| ||||||||||||||| | ||||||| Sbjct: 1169 gcccgtctccctccagcatccggaccacctccgacatcctcggccggt 1216
>ref|NM_125922.1| Arabidopsis thaliana kinase AT5G65240 mRNA, complete cds Length = 1854 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||||| | ||||||||||||||| || ||||| ||||||||||| Sbjct: 1481 tgtccagttacaagctccagaagcataattccgtacccgaaaacatc 1435
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 381 acctccaccttctgccactcctcccagcgctccgccagcccgtcgccctccagcatcctc 440 |||||||| || |||||||| ||||| | |||||| ||||| || || |||||||||||| Sbjct: 81304 acctccacgttttgccactcttcccacctctccgcaagcccttctccttccagcatcctc 81363 Query: 441 accacctccgacatc 455 || || || |||||| Sbjct: 81364 acaacttcagacatc 81378 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 665 aagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||| ||||||||||| || || ||||||||||| Sbjct: 81672 aagctcaagaagcatgatcccatacccgaaaacatc 81707
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||||||||| ||||| |||||||||| ||||| || |||||||| ||||||| Sbjct: 64818 tgtccagtgatgagctcgagaagcatgaccccgtacccaaaaacatcagtcttct 64764 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 ||||||||||| ||||| |||||||||| ||||| || |||||||| ||||||| Sbjct: 54334 tgtccagtgatgagctcgagaagcatgaccccgtacccaaaaacatcagtcttct 54280
>gb|AY059844.1| Arabidopsis thaliana receptor-like protein kinase (At5g65240; MQN23.19) mRNA, complete cds Length = 2694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||||| | ||||||||||||||| || ||||| ||||||||||| Sbjct: 2071 tgtccagttacaagctccagaagcataattccgtacccgaaaacatc 2025
>gb|BT006309.1| Arabidopsis thaliana At5g65240 mRNA, complete cds Length = 831 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||||| | ||||||||||||||| || ||||| ||||||||||| Sbjct: 458 tgtccagttacaagctccagaagcataattccgtacccgaaaacatc 412
>dbj|AB013395.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23 Length = 86064 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 654 tgtccagtgataagctccagaagcatgatgccgtaaccgaaaacatc 700 |||||||| | ||||||||||||||| || ||||| ||||||||||| Sbjct: 73387 tgtccagttacaagctccagaagcataattccgtacccgaaaacatc 73433
>gb|U93048.1|DCU93048 Daucus carota somatic embryogenesis receptor-like kinase mRNA, complete cds Length = 1755 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Minus Query: 542 caggtccgggtccaccagcatctccaccttcttctctttcagcagccctttcacccagtc 601 |||||| || || ||||||||||||| ||| |||||||||| || | ||| ||||| || Sbjct: 1434 caggtcaggatcgaccagcatctccaactttttctctttcaaaaggcttttaacccaatc 1375 Query: 602 aagcagcatgacatcgtcgtcattcgcaagacgtgcgaggtcaaacgccctctgtccagt 661 | || ||| ||||| || || |||||||| || || || ||||| || ||||||||||| Sbjct: 1374 caacaacataacatcatcatcgttcgcaaggcgagcaagatcaaaagctctctgtccagt 1315 Query: 662 gataagctccagaagcatgatgccgtaaccgaaaacatccgtcttct 708 || ||||| | ||||| || || ||||| || ||||| ||||||| Sbjct: 1314 aatgagctctaagagcataatcccataaccaaagacatcggtcttct 1268
>ref|XM_463808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1868 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 497 cacctggatcagcgcctccacctcgtgct 525 |||| |||||||||||||||||||||||| Sbjct: 1043 cacccggatcagcgcctccacctcgtgct 1015
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 cacctggatcagcgcctccacctcgtgct 525 |||| |||||||||||||||||||||||| Sbjct: 30536 cacccggatcagcgcctccacctcgtgct 30564
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 497 cacctggatcagcgcctccacctcgtgct 525 |||| |||||||||||||||||||||||| Sbjct: 33101 cacccggatcagcgcctccacctcgtgct 33129
>dbj|AK120063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K22, full insert sequence Length = 1867 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 497 cacctggatcagcgcctccacctcgtgct 525 |||| |||||||||||||||||||||||| Sbjct: 1041 cacccggatcagcgcctccacctcgtgct 1013
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttgggccg 463 |||||||||||||| ||||||||||| ||||| Sbjct: 1820 agcatcctcaccacgtccgacatcttaggccg 1789
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 432 agcatcctcaccacctccgacatcttgggccg 463 |||||||||||||| ||||||||||| ||||| Sbjct: 6765867 agcatcctcaccacgtccgacatcttaggccg 6765898 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 422 gtcgccctccagcatcctcaccacctccg 450 |||||||||||||||||||| | |||||| Sbjct: 38314121 gtcgccctccagcatcctcagcgcctccg 38314093
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 432 agcatcctcaccacctccgacatcttgggccg 463 |||||||||||||| ||||||||||| ||||| Sbjct: 118019 agcatcctcaccacgtccgacatcttaggccg 118050
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Plus Query: 432 agcatcctcaccacctccgacatcttgggccg 463 |||||||||||||| ||||||||||| ||||| Sbjct: 47928 agcatcctcaccacgtccgacatcttaggccg 47959
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full insert sequence Length = 1730 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttgggccg 463 |||||||||||||| ||||||||||| ||||| Sbjct: 1374 agcatcctcaccacgtccgacatcttaggccg 1343
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 425 gccctccagcatcctcaccacctc 448 |||||||||||||||||||||||| Sbjct: 3780962 gccctccagcatcctcaccacctc 3780985 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 gccagctccgcctcctgccgg 377 ||||||||||||||||||||| Sbjct: 4036418 gccagctccgcctcctgccgg 4036438 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 cctggatcagcgcctccacct 519 ||||||||||||||||||||| Sbjct: 1898534 cctggatcagcgcctccacct 1898514
>ref|NM_185793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 870 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttctc 577 ||||||||||| ||||||||||||||| Sbjct: 546 gtccaccagcacctccaccttcttctc 520
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttctc 577 ||||||||||| ||||||||||||||| Sbjct: 9333911 gtccaccagcacctccaccttcttctc 9333885
>emb|BX814202.1|CNS0AEBB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 657 Score = 46.1 bits (23), Expect = 0.16 Identities = 53/63 (84%) Strand = Plus / Minus Query: 560 catctccaccttcttctctttcagcagccctttcacccagtcaagcagcatgacatcgtc 619 |||||| | ||||||||| |||| || |||||||||||||||| | |||||| ||||| Sbjct: 103 catctctagcttcttctccttcaacaatactttcacccagtcaagtaacatgacgtcgtc 44 Query: 620 gtc 622 ||| Sbjct: 43 gtc 41 Score = 44.1 bits (22), Expect = 0.62 Identities = 73/90 (81%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatcttgggccggtccat 469 |||||| ||||| || || ||||||||||| || || || |||||||| || | ||||| Sbjct: 253 ctccgcaagcccatctccttccagcatccttacaacttcagacatctttggtctttccat 194 Query: 470 cggtgacccctgcgtgcacagcagcgccac 499 ||||| || |||||||| |||| |||||| Sbjct: 193 tggtgatccttgcgtgcatagcaacgccac 164
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttctc 577 ||||||||||| ||||||||||||||| Sbjct: 101252 gtccaccagcacctccaccttcttctc 101226
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttctc 577 ||||||||||| ||||||||||||||| Sbjct: 62321 gtccaccagcacctccaccttcttctc 62295
>dbj|AK066417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067F20, full insert sequence Length = 2500 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttctc 577 ||||||||||| ||||||||||||||| Sbjct: 1768 gtccaccagcacctccaccttcttctc 1742
>ref|NM_032727.2| Homo sapiens internexin neuronal intermediate filament protein, alpha (INA), mRNA Length = 3243 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagca 435 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>gb|AY249867.1| Manis pentadactyla recombination activating protein 1 (RAG1) gene, partial cds Length = 797 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 560 catctccaccttcttctctttcagca 585 ||||||||||||||||||| |||||| Sbjct: 755 catctccaccttcttctctgtcagca 730
>emb|AJ833018.1| Schedonorus pratensis hd1 gene for putative Hd1-like protein and s2539 gene for putative peroxidase Length = 9329 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Minus Query: 408 cgctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 457 ||||| || ||||||||||| |||||||| | |||||||| |||||||| Sbjct: 157 cgctctgcaagcccgtcgccttccagcatgcggaccacctctgacatctt 108
>emb|AL591408.19| Human DNA sequence from clone RP11-792D24 on chromosome 10 Contains the INA gene for internexin neuronal intermediate filament protein alpha, the RNF134 gene for ring finger protein 134, the TAF5D gene for 100 kD TAF5 RNA polymerase II TATA box binding protein (TBP)-associated factor, a novel gene, the 5' end of the PDCD11 gene for programmed cell death 11 and four CpG islands, complete sequence Length = 174474 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagca 435 ||||||||||||||||| |||||||| Sbjct: 29659 ctccgccagcccgtcgcgctccagca 29634
>ref|XM_784841.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584997), mRNA Length = 5535 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 ttctctttcagcagccctttca 594 |||||||||||||||||||||| Sbjct: 4139 ttctctttcagcagccctttca 4118
>ref|XM_784820.1| PREDICTED: Strongylocentrotus purpuratus similar to predicted CDS, peptidase family A16 and RNA-directed DNA polymerase and Integrase, catalytic domain and Zn-finger, CCHC type (XC382) (LOC584976), mRNA Length = 5670 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 573 ttctctttcagcagccctttca 594 |||||||||||||||||||||| Sbjct: 4235 ttctctttcagcagccctttca 4214
>gb|S78296.1| neurofilament-66 [human, fetal brain, mRNA, 3197 nt] Length = 3197 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagca 435 ||||||||||||||||| |||||||| Sbjct: 555 ctccgccagcccgtcgcgctccagca 530
>gb|BC006359.2| Homo sapiens internexin neuronal intermediate filament protein, alpha, mRNA (cDNA clone MGC:12702 IMAGE:4125949), complete cds Length = 3243 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagca 435 ||||||||||||||||| |||||||| Sbjct: 568 ctccgccagcccgtcgcgctccagca 543
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 422 gtcgccctccagcatcctcaccacctccg 450 |||||||||||||||||||| | |||||| Sbjct: 1803 gtcgccctccagcatcctcagcgcctccg 1775
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 gtccaccagcatctccaccttcttc 575 ||||||||||||| ||||||||||| Sbjct: 312902 gtccaccagcatcaccaccttcttc 312878
>dbj|AB188249.1| Oryza sativa (japonica cultivar-group) ORK1 gene for SERK family receptor-like protein kinase, partial cds Length = 5675 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttggg 460 |||||||||||||||||| ||||||||| Sbjct: 2044 agcatcctcaccacctccaccatcttggg 2016
>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence Length = 166892 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 tccaccttctgccactcctcc 404 ||||||||||||||||||||| Sbjct: 148192 tccaccttctgccactcctcc 148212
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 422 gtcgccctccagcatcctcaccacctccg 450 |||||||||||||||||||| | |||||| Sbjct: 74946 gtcgccctccagcatcctcagcgcctccg 74918
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ccgcctcctgccggaccacct 384 ||||||||||||||||||||| Sbjct: 103838 ccgcctcctgccggaccacct 103858
>dbj|AP004619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0583B06 Length = 134442 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 432 agcatcctcaccacctccgacatcttggg 460 |||||||||||||||||| ||||||||| Sbjct: 4825 agcatcctcaccacctccaccatcttggg 4797
>dbj|D32045.1|RATGENOME Rat gene for alpha 1B adrenergic receptor, promoter region and partial cds Length = 2387 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcccagcgctccgccagcccg 422 |||||||||||| |||||||||||| Sbjct: 1322 ctcctcccagcgttccgccagcccg 1346
>ref|XM_515615.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC27019 (LOC459397), mRNA Length = 1367 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcgcctccacctcgtgct 525 |||||||||||||||||||| Sbjct: 474 cagcgcctccacctcgtgct 455
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tcgccctccagcatcctcaccacc 446 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>ref|XM_361443.1| Magnaporthe grisea 70-15 hypothetical protein (MG03917.4) partial mRNA Length = 4320 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 ccagcccgtcgccctccagc 434 |||||||||||||||||||| Sbjct: 1015 ccagcccgtcgccctccagc 996
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 355 gagccagctccgcctcctgccgga 378 ||||||||||||| |||||||||| Sbjct: 2284559 gagccagctccgcttcctgccgga 2284536
>gb|AC119825.11| Mus musculus chromosome 3, clone RP23-358O22, complete sequence Length = 205291 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cttctgccactcctcccagc 408 |||||||||||||||||||| Sbjct: 134441 cttctgccactcctcccagc 134422
>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence Length = 209257 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 tctccaccttcttctctttc 581 |||||||||||||||||||| Sbjct: 93420 tctccaccttcttctctttc 93401
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 tctccaccttcttctctttc 581 |||||||||||||||||||| Sbjct: 57205 tctccaccttcttctctttc 57186
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cagcgcctccacctcgtgct 525 |||||||||||||||||||| Sbjct: 121457 cagcgcctccacctcgtgct 121438
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 9.7 Identities = 41/48 (85%) Strand = Plus / Minus Query: 410 ctccgccagcccgtcgccctccagcatcctcaccacctccgacatctt 457 |||||| ||||| || || ||||||||||| ||||| || |||||||| Sbjct: 116521 ctccgcaagcccatctccttccagcatcctaaccacttctgacatctt 116474
>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene cluster, complete sequence Length = 38146 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cagctccgcctcctgccgga 378 |||||||||||||||||||| Sbjct: 30386 cagctccgcctcctgccgga 30405
>gb|AC123830.5| Mus musculus BAC clone RP24-125B17 from chromosome 7, complete sequence Length = 186045 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ccaccttctgccactcctcc 404 |||||||||||||||||||| Sbjct: 67005 ccaccttctgccactcctcc 67024
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete sequence Length = 205281 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggactctgtctgtcatcatg 201 |||||||||||||||||||| Sbjct: 169143 ggactctgtctgtcatcatg 169124
>gb|AC109169.13| Mus musculus chromosome 6, clone RP23-5D6, complete sequence Length = 204911 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 tctccaccttcttctctttc 581 |||||||||||||||||||| Sbjct: 35060 tctccaccttcttctctttc 35041
>emb|BX957326.8| Zebrafish DNA sequence from clone DKEY-31B16 in linkage group 23, complete sequence Length = 259092 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 tggatcagcgcctccacctc 520 |||||||||||||||||||| Sbjct: 170629 tggatcagcgcctccacctc 170648
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 385 ccaccttctgccactcctcccagc 408 |||||||||||| ||||||||||| Sbjct: 247937 ccaccttctgcccctcctcccagc 247914
>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster Length = 32668 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cagctccgcctcctgccgga 378 |||||||||||||||||||| Sbjct: 6107 cagctccgcctcctgccgga 6088
>gb|AC096622.14| Mus musculus strain 129/SvJ clone mgs1-182e11, complete sequence Length = 131919 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 cttctgccactcctcccagc 408 |||||||||||||||||||| Sbjct: 32187 cttctgccactcctcccagc 32206
>ref|NM_170528.2| Drosophila melanogaster CG31012-RD, transcript variant D (CG31012), mRNA Length = 2801 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gtccaccagcatctccacct 570 |||||||||||||||||||| Sbjct: 239 gtccaccagcatctccacct 258
>ref|NM_170526.2| Drosophila melanogaster CG31012-RC, transcript variant C (CG31012), mRNA Length = 3800 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gtccaccagcatctccacct 570 |||||||||||||||||||| Sbjct: 1238 gtccaccagcatctccacct 1257
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 488 cagcagcgccacctggatcagcgc 511 |||||||| ||||||||||||||| Sbjct: 1286681 cagcagcggcacctggatcagcgc 1286658
>gb|AC008896.6| Homo sapiens chromosome 5 clone CTD-2235B13, complete sequence Length = 128624 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 agctagaaattctgcaacgagggg 235 |||||||||||||| ||||||||| Sbjct: 101989 agctagaaattctgaaacgagggg 102012
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tcgccctccagcatcctcaccacc 446 ||||||||||||||| |||||||| Sbjct: 2160859 tcgccctccagcatcttcaccacc 2160882
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gtccaccagcatctccacct 570 |||||||||||||||||||| Sbjct: 130558 gtccaccagcatctccacct 130577
>gb|AC096623.31| Mus musculus strain 129/SvJ chromosome 3 clone mgs1-30a13, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cttctgccactcctcccagc 408 |||||||||||||||||||| Sbjct: 104709 cttctgccactcctcccagc 104690
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 407 gcgctccgccagcccgtcgccctccagc 434 ||||||| |||||||||||| ||||||| Sbjct: 3745076 gcgctccaccagcccgtcgcgctccagc 3745103
>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence Length = 208705 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 tctccaccttcttctctttc 581 |||||||||||||||||||| Sbjct: 16936 tctccaccttcttctctttc 16955
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ccagcatcctcaccacctcc 449 |||||||||||||||||||| Sbjct: 2270008 ccagcatcctcaccacctcc 2269989
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tcgccctccagcatcctcaccacc 446 ||||||||||||||| |||||||| Sbjct: 28761 tcgccctccagcatcttcaccacc 28784
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 tcgccctccagcatcctcaccacc 446 ||||||||||||||| |||||||| Sbjct: 1213 tcgccctccagcatcttcaccacc 1190
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 423 tcgccctccagcatcctcaccacc 446 ||||||||||||||| |||||||| Sbjct: 116652 tcgccctccagcatcttcaccacc 116675
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 gtccaccagcatctccacct 570 |||||||||||||||||||| Sbjct: 147213 gtccaccagcatctccacct 147232
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 cagctccgcctcctgccgga 378 |||||||||||||||||||| Sbjct: 42630 cagctccgcctcctgccgga 42649
>gb|AC149587.5| Mus musculus BAC clone RP23-472J13 from 5, complete sequence Length = 188522 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 ccagctccgcctcctgccgg 377 |||||||||||||||||||| Sbjct: 92333 ccagctccgcctcctgccgg 92314
>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence Length = 167731 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 tctccaccttcttctctttc 581 |||||||||||||||||||| Sbjct: 124045 tctccaccttcttctctttc 124026
>dbj|AP006089.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT28L17, TM0153b, complete sequence Length = 92148 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 566 caccttcttctctttcagca 585 |||||||||||||||||||| Sbjct: 67460 caccttcttctctttcagca 67441
>gb|U59415.1|CHU59415 Clostridium hungatei nitrogenase 3 subunit H (anfH) gene, partial cds, subunit D (anfD) and G (anfG) genes, complete cds, and subunit K (anfK) gene, partial cds Length = 3070 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 cttctctttcagcagccctt 591 |||||||||||||||||||| Sbjct: 2467 cttctctttcagcagccctt 2448
>emb|AL163636.7|CNS01RIK Human chromosome 14 DNA sequence BAC R-903H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202337 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 564 tccaccttcttctctttcag 583 |||||||||||||||||||| Sbjct: 72311 tccaccttcttctctttcag 72292
>gb|M23528.1|AVINIFHDGK A.vinelandii nitrogenase 3 (anf) subunits H,D,G,K genes, complete cds, and ORFs Length = 6108 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 cttctctttcagcagccctt 591 |||||||||||||||||||| Sbjct: 3474 cttctctttcagcagccctt 3455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,015,026 Number of Sequences: 3902068 Number of extensions: 6015026 Number of successful extensions: 143048 Number of sequences better than 10.0: 150 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141779 Number of HSP's gapped (non-prelim): 1256 length of query: 708 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 685 effective length of database: 17,143,297,704 effective search space: 11743158927240 effective search space used: 11743158927240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)