>emb|AL137128.4|CNS01DWD Human chromosome 14 DNA sequence BAC R-951P22 of library RPCI-11
           from chromosome 14 of Homo sapiens (Human), complete
           sequence
          Length = 228652

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 49  tctaattctagatacagttaa 69
           |||||||||||||||||||||
Sbjct: 866 tctaattctagatacagttaa 846

>emb|AL163011.3|CNS01RI8 Human chromosome 14 DNA sequence BAC C-2324M15 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 100791

 Score = 42.1 bits (21), Expect = 0.58
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    tctaattctagatacagttaa 69
             |||||||||||||||||||||
Sbjct: 20203 tctaattctagatacagttaa 20223

>dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-344F5, complete
            sequence
          Length = 137996

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   tgcatgccatttacaaatgt 104
            ||||||||||||||||||||
Sbjct: 6593 tgcatgccatttacaaatgt 6612

>dbj|AP001977.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-248G21, complete
              sequences
          Length = 156957

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tgcatgccatttacaaatgt 104
              ||||||||||||||||||||
Sbjct: 155647 tgcatgccatttacaaatgt 155666

>gb|AC158641.12| Mus musculus 10 BAC RP23-461E22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186390

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 134    gtgatttcaaaaagcttct 152
              |||||||||||||||||||
Sbjct: 173887 gtgatttcaaaaagcttct 173869

>gb|DQ164216.1| Inducible shuttle vector pPW578, complete sequence
          Length = 9482

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 130  tgatgtgatttcaaaaagcttct 152
            |||||||| ||||||||||||||
Sbjct: 1094 tgatgtgaattcaaaaagcttct 1072

>gb|DQ164215.1| Shuttle vector pPW380, complete sequence
          Length = 9219

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 130  tgatgtgatttcaaaaagcttct 152
            |||||||| ||||||||||||||
Sbjct: 1094 tgatgtgaattcaaaaagcttct 1072

>gb|AC093292.2| Homo sapiens chromosome 5 clone RP11-503D12, complete sequence
          Length = 186278

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    tgtgaatacactgtgagca 30
             |||||||||||||||||||
Sbjct: 98636 tgtgaatacactgtgagca 98618

>ref|XM_760148.1| Theileria parva strain Muguga hypothetical protein (TP02_0675)
            partial mRNA
          Length = 3027

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 98   caaatgtactcctacatgc 116
            |||||||||||||||||||
Sbjct: 2983 caaatgtactcctacatgc 2965

>emb|BX936363.13| Zebrafish DNA sequence from clone CH211-112P19 in linkage group 11,
             complete sequence
          Length = 184849

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 5     tgtcctttgtgaatacact 23
             |||||||||||||||||||
Sbjct: 92305 tgtcctttgtgaatacact 92287

>emb|AL109618.1|HSJ775C13 Human DNA sequence from clone RP4-775C13 on chromosome 20p12.1-13
             Contains an NS1-associated protein 1 (NSAP1) pseudogene,
             complete sequence
          Length = 103819

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 66    ttaaaccaccntggttttctgc 87
             |||||||||| |||||||||||
Sbjct: 83824 ttaaaccaccatggttttctgc 83803

>emb|AL034549.19|HS1125A11 Human DNA sequence from clone RP5-1125A11 on chromosome 20q11.1-11.23
             Contains the TPM5P gene for tropomyosin 5 pseudogene, a
             novel gene, the 3' end of a novel gene, the 5' end of the
             RALY gene for RNA binding protein (autoantigenic,
             hnRNP-associated with lethal yellow), a Down syndrome
             critical region gene 5 (DSCR5) pseudogene and two CpG
             islands, complete sequence
          Length = 155567

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    tctgcatgccatttacaaa 101
             |||||||||||||||||||
Sbjct: 81549 tctgcatgccatttacaaa 81531

>emb|AL593845.5| Zebrafish DNA sequence from clone BUSM1-142B24 in linkage group 17
             Contains a novel gene for a protein similar to human
             FLJ11186, a novel gene similar to human KIAA1316 and fly
             CG2747, a novel gene for a protein with a HECT-domain
             (ubiquitin-transferase) and a CpG island, complete
             sequence
          Length = 89159

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    atgccatttacaaatgtac 106
             |||||||||||||||||||
Sbjct: 77110 atgccatttacaaatgtac 77092

>emb|CR628365.6| Zebrafish DNA sequence from clone CH211-137O16 in linkage group 11,
              complete sequence
          Length = 191036

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      tgtcctttgtgaatacact 23
              |||||||||||||||||||
Sbjct: 108960 tgtcctttgtgaatacact 108942

>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13,
             complete sequence
          Length = 118999

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 145   aagcttctatgctgcttat 163
             |||||||||||||||||||
Sbjct: 40770 aagcttctatgctgcttat 40752

>emb|BX465838.15| Zebrafish DNA sequence from clone DKEY-11J8 in linkage group 17, complete
              sequence
          Length = 229940

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     atgccatttacaaatgtac 106
              |||||||||||||||||||
Sbjct: 179494 atgccatttacaaatgtac 179512

>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence
          Length = 244779

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 145    aagcttctatgctgcttat 163
              |||||||||||||||||||
Sbjct: 229277 aagcttctatgctgcttat 229295

>gb|AC117379.3| Homo sapiens 3 BAC RP11-392C7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 181191

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 153   atgctgcttatgcttcatt 171
             |||||||||||||||||||
Sbjct: 74937 atgctgcttatgcttcatt 74955

>gb|AC158601.5| Mus musculus 10 BAC RP23-119L9 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 249420

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 134    gtgatttcaaaaagcttct 152
              |||||||||||||||||||
Sbjct: 142673 gtgatttcaaaaagcttct 142691

>gb|AC079402.5| Homo sapiens BAC clone RP11-597E15 from 2, complete sequence
          Length = 86973

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 129   gtgatgtgatttcaaaaagcttc 151
             ||||| |||||||||||||||||
Sbjct: 44547 gtgatctgatttcaaaaagcttc 44569

>emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19 on chromosome 3,
             complete sequence
          Length = 130239

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 134   gtgatttcaaaaagcttct 152
             |||||||||||||||||||
Sbjct: 40041 gtgatttcaaaaagcttct 40059

>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete
             sequence
          Length = 190641

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    catttacaaatgtactcct 110
             |||||||||||||||||||
Sbjct: 14167 catttacaaatgtactcct 14185

>emb|AL805967.7| Mouse DNA sequence from clone RP23-450K9 on chromosome X, complete
            sequence
          Length = 189710

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 88   atgccatttacaaatgtac 106
            |||||||||||||||||||
Sbjct: 4176 atgccatttacaaatgtac 4194


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,528,198
Number of Sequences: 3902068
Number of extensions: 1528198
Number of successful extensions: 100763
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100713
Number of HSP's gapped (non-prelim): 50
length of query: 184
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 162
effective length of database: 17,147,199,772
effective search space: 2777846363064
effective search space used: 2777846363064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)