ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal32a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR8_ECOLI (P0AB89) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 32 1.1
2PUR8_ECOL6 (P0AB90) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylo... 32 1.1
3CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC... 30 4.2
4CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC... 30 7.1
5ZN677_HUMAN (Q86XU0) Zinc finger protein 677 29 9.3
6OX2R_HUMAN (O43614) Orexin receptor type 2 (Ox2r) (Hypocretin re... 29 9.3

>PUR8_ECOLI (P0AB89) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL)
          Length = 456

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/81 (25%), Positives = 40/81 (49%)
 Frame = -3

Query: 590 ESASTVALYDGTTRSGICVSEIVDYPLKAIVFTSNNVNALIDVVSAACLALHENNTAHSL 411
           E A+ +   + TT   +   + V+Y LK  V     ++A+ + +  AC +   NN +H+L
Sbjct: 77  EDAARIKTIERTTNHDV---KAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHAL 133

Query: 410 MISNNGRNAFLFPQVKNLVTG 348
           M+    R+  + P  + L+ G
Sbjct: 134 ML-KTARDEVILPYWRQLIDG 153



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>PUR8_ECOL6 (P0AB90) Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase)|
           (ASL)
          Length = 456

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 21/81 (25%), Positives = 40/81 (49%)
 Frame = -3

Query: 590 ESASTVALYDGTTRSGICVSEIVDYPLKAIVFTSNNVNALIDVVSAACLALHENNTAHSL 411
           E A+ +   + TT   +   + V+Y LK  V     ++A+ + +  AC +   NN +H+L
Sbjct: 77  EDAARIKTIERTTNHDV---KAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHAL 133

Query: 410 MISNNGRNAFLFPQVKNLVTG 348
           M+    R+  + P  + L+ G
Sbjct: 134 ML-KTARDEVILPYWRQLIDG 153



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>CD2L2_HUMAN (Q9UQ88) PITSLRE serine/threonine-protein kinase CDC2L2 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 2) (CDK11)
          Length = 780

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +3

Query: 126 NEPTHELLMVAYSVGLGNKVISYSATEFFQVFKVTILERERSHPIGNSSLRS---LLEIN 296
           N    ++  V   +G  ++ I    +E   V K+T  E    HP  N   R    L +  
Sbjct: 626 NSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSE----HPYNNLRKRFGALLSDQG 681

Query: 297 FGVINKVATALPGRKIAASDQIFH 368
           F ++NK  T  PGR+I+A D + H
Sbjct: 682 FDLMNKFLTYFPGRRISAEDGLKH 705



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>CD2L1_HUMAN (P21127) PITSLRE serine/threonine-protein kinase CDC2L1 (EC|
           2.7.11.22) (Galactosyltransferase-associated protein
           kinase p58/GTA) (Cell division cycle 2-like protein
           kinase 1) (CLK-1) (CDK11) (p58 CLK-1)
          Length = 795

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 201 TEFFQVFKVTILERERSHPIGNSSLRS---LLEINFGVINKVATALPGRKIAASDQIFH 368
           +E   V K+T  E    HP  N   R    L +  F ++NK  T  PGR+I+A D + H
Sbjct: 666 SELPAVKKMTFSE----HPYNNLRKRFGALLSDQGFDLMNKFLTYFPGRRISAEDGLKH 720



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>ZN677_HUMAN (Q86XU0) Zinc finger protein 677|
          Length = 584

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 162 SVGLGNKVISYSATEFFQVFKVTILERERSHPIGNSSLRSLLE 290
           SVG  +K +S       +++ + ILER+ SH I N  L+ + E
Sbjct: 59  SVGFTSKGLSPKENNKEELYHLVILERKESHGINNFDLKEVWE 101



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>OX2R_HUMAN (O43614) Orexin receptor type 2 (Ox2r) (Hypocretin receptor type 2)|
          Length = 444

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/73 (23%), Positives = 35/73 (47%)
 Frame = -3

Query: 422 AHSLMISNNGRNAFLFPQVKNLVTGCYLSAWECCGYFVYHTKVDFEQASETGISNRMASF 243
           +H L+ +N+  N  ++  +       + +A+ CC   V+H + D      T   +R  S 
Sbjct: 349 SHWLVYANSAANPIIYNFLSGKFREEFKAAFSCCCLGVHHRQEDRLTRGRTSTESR-KSL 407

Query: 242 SFQDGDFEDLKKL 204
           + Q  +F+++ KL
Sbjct: 408 TTQISNFDNISKL 420


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,997,627
Number of Sequences: 219361
Number of extensions: 1800272
Number of successful extensions: 4654
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4654
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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