ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31l03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 603 e-169
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 577 e-161
3ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic... 70 7e-09
4emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 7e-09
5emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 70 7e-09
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
7gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme... 70 7e-09
8gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 70 7e-09
9dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
10dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
11dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
12dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
13dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 7e-09
14emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 70 7e-09
15emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 62 2e-06
16emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 54 4e-04
17gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence 50 0.007
18gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 50 0.007
19emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 50 0.007
20gb|AY103590.1| Zea mays PCO098412 mRNA sequence 50 0.007
21ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 44 0.40
22emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 44 0.40
23gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 42 1.6
24emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 42 1.6
25dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, comp... 42 1.6
26ref|XM_468482.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
27emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.3
28emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.3
29dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
31dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
32dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 g... 40 6.3
33dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
34dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
35dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
36dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
37dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
38emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 6.3
39dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.3 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  603 bits (304), Expect = e-169
 Identities = 436/477 (91%), Gaps = 19/477 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    gctcattgtggcagacgcagcaaaccacctagnagctaatagtttattcagagtagcaat 60
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1844 gctcattgtggcagacgcagcaaaccacctag-agctaatagtttattcagagtagcaat 1786

                                                                        
Query: 61   agcctggccggctgcttcacagtaaccaaaacgacaaacggaa---gtcagaacgaattc 117
            |||||||||||||||||||||||||||||| ||||  |||  |   ||||||||||||| 
Sbjct: 1785 agcctggccggctgcttcacagtaaccaaa-cgacgcacgacaacagtcagaacgaatta 1727

                                                                        
Query: 118  cacagacggaacagcgacagcaaaaatcatcttatcactcgcacagcaccgcgcc----- 172
            ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||     
Sbjct: 1726 cacagacggaacagcgacagcaaa--tcatcttatcactcgcacagcaacgcgcctgtgc 1669

                                                                        
Query: 173  -ctcctccagagaatcctcctccgcccgccatgcgagcaggttggnaagcttgccttcct 231
             |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1668 cctcctcgagagactcctcctccgcccgccatgcgagcaggttggcaagcttgccttcct 1609

                                                                        
Query: 232  tgaccagagggtggccgctctccacattctcgccctcgaagcagtggaagacggacctgg 291
            ||||||||||||||||||||||||||||||||      |||||||||||||| |||||||
Sbjct: 1608 tgaccagagggtggccgctctccacattctcg------aagcagtggaagacagacctgg 1555

                                                                        
Query: 292  gcgacccggcggagacagcaacctcttcattcgcggtaaagctctggtagatgaggacgc 351
            |||||||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||
Sbjct: 1554 gcgacccggcagagacagcaagctcttcgttcgcggcaaagctctggtagatgaggacgc 1495

                                                                        
Query: 352  ccccgcaggggagctcctgctccacgatgttgttgcagtcgtatgcctcggcgtcgagct 411
            | ||||| || |||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1494 caccgcatggcagctcctgctccacaacgttgttgcagtcgtatgcctcggcgtcgagct 1435

                                                                     
Query: 412  tcttgccccaggtggcggcgtggccgcggccaccgaagatggtgaccgccacanaga 468
            ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||
Sbjct: 1434 tcttgccccaggtggcggcatggccacggccaccgaagatggtgaccgccacagaga 1378
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>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  577 bits (291), Expect = e-161
 Identities = 407/439 (92%), Gaps = 9/439 (2%)
 Strand = Plus / Minus

                                                                        
Query: 24   accacctagnagctaatagtttattcagagtagcaatagcctggccggctgcttcacagt 83
            ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1378 accacctag-agctaatagtttattcagag-agcaatagcctggccggctgcttcacagt 1321

                                                                        
Query: 84   aaccaaaacgacaaacgga-agtcagaacgaattccacagacggaacagcgacagcaaaa 142
            ||||||| |||||||| || ||||||||| ||||||||||| |||| |||||||||||| 
Sbjct: 1320 aaccaaa-cgacaaactgacagtcagaacaaattccacagatggaatagcgacagcaaa- 1263

                                                                        
Query: 143  atcatcttatcactcgcacagcaccgcgccctcctccagagaatcctcctccgcccgcca 202
             |||| |  |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1262 -tcatgtcttcactcgcacagcaccgcgccctcttccagagaatcctcctccgcccgcca 1204

                                                                        
Query: 203  tgcgagcaggttggnaagcttgccttccttgaccagagggtggccgctctccacattctc 262
            |||||| |||||||  |||||||||||||||||||||||||||| |   | |||| ||||
Sbjct: 1203 tgcgaggaggttggcgagcttgccttccttgaccagagggtggctg---tgcacactctc 1147

                                                                        
Query: 263  gccctcgaagcagtggaagacggacctgggcgacccggcggagacagcaacctcttcatt 322
            | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 1146 ggcctcgaagcagtggaagacggacctgggcgacccggcagagacagcaacctcttcgtt 1087

                                                                        
Query: 323  cgcggtaaagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgtt 382
            | |||||||||||||||||||||||||||| || |||||||||||||||||||| | |||
Sbjct: 1086 cacggtaaagctctggtagatgaggacgcctccacaggggagctcctgctccacaacgtt 1027

                                                                        
Query: 383  gttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcgtggccgcggcc 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 gttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcgtggccgcggcc 967

                               
Query: 443  accgaagatggtgaccgcc 461
            ||| |||||||||||||||
Sbjct: 966  accaaagatggtgaccgcc 948
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>ref|XM_473046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 967
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 330   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13505 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 13447



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 1     gctcattgtggcagacgcagcaaaccacctag 32
             |||||||||||||||||||||  |||||||||
Sbjct: 13891 gctcattgtggcagacgcagctgaccacctag 13860



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 58    aatagcctggccggctgcttcacag 82
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758
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>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1564 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1506



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1950 gctcattgtggcagacgcagctgaccacctag 1919



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 330      aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
                ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 24892920 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 24892862



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 1        gctcattgtggcagacgcagcaaaccacctag 32
                |||||||||||||||||||||  |||||||||
Sbjct: 24893306 gctcattgtggcagacgcagctgaccacctag 24893275



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 58       aatagcctggccggctgcttcacag 82
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173
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>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine
            decarboxylase mRNA, complete cds
          Length = 1197

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1025 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 967
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>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1115 aagctctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 1057



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1501 gctcattgtggcagacgcagctgaccacctag 1470



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368
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>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctag 1963



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctag 1963



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctag 1963



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                       
Query: 330  aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
            ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1608 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctag 1963



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
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>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
           insert sequence
          Length = 1217

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 330 aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
           ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 766 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 708



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            |||||||||||||||||||||  |||||||||
Sbjct: 1152 gctcattgtggcagacgcagctgaccacctag 1121



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 58   aatagcctggccggctgcttcacag 82
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 330    aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
              ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 154636 aagctctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 154578



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 1      gctcattgtggcagacgcagcaaaccacctag 32
              |||||||||||||||||||||  |||||||||
Sbjct: 155022 gctcattgtggcagacgcagctgaccacctag 154991



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     aatagcctggccggctgcttcacag 82
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 53/59 (89%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                        
Query: 330   aagctctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 388
             ||||||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13533 aagctctggtagatgagga-gccgccacagggcagctcctgctctaccatgttgttgca 13476



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 1     gctcattgtggcagacgcagcaaaccacctag 32
             |||||||||||||||||||||  |||||||||
Sbjct: 13919 gctcattgtggcagacgcagctgaccacctag 13888



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 58    aatagcctggccggctgcttcacag 82
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
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>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 329 aaagctctggtagatgaggacgcccccgcaggggagctcctgctccacga-tgttgttgc 387
           |||||||||||| ||||| |  || |||||||| |||||||||||||| | |||||| ||
Sbjct: 111 aaagctctggtaaatgagaagaccaccgcagggcagctcctgctccacaactgttgtagc 52

                                              
Query: 388 agtcgtatgcctcggcgtcgagcttcttgccccag 422
           |||| ||  ||||||| || || ||||| ||||||
Sbjct: 51  agtcataaacctcggcatcaagtttcttcccccag 17
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>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
          Length = 2057

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 363  agctcctgctccacgatgttgttgcagtc 391
            |||||||||||||| ||||||||||||||
Sbjct: 1538 agctcctgctccaccatgttgttgcagtc 1510



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 249  ctctccacattctcgccctcgaagcagtggaa 280
            |||||||| |||||||| || |||||||||||
Sbjct: 1646 ctctccacgttctcgccgtcaaagcagtggaa 1615
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>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 363 agctcctgctccacgatgttgttgcagtc 391
           |||||||||||||| ||||||||||||||
Sbjct: 540 agctcctgctccaccatgttgttgcagtc 568



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 249 ctctccacattctcgccctcgaagcagtggaa 280
           |||||||| |||||||| || |||||||||||
Sbjct: 432 ctctccacgttctcgccgtcaaagcagtggaa 463



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 1   gctcattgtggcagacgcagcaaaccacctag 32
           ||||||||||| |||||||||  |||||||||
Sbjct: 109 gctcattgtggtagacgcagctgaccacctag 140
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>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 363  agctcctgctccacgatgttgttgcagtc 391
            |||||||||||||| ||||||||||||||
Sbjct: 1358 agctcctgctccaccatgttgttgcagtc 1330



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            ||||||||||| |||||||||  |||||||||
Sbjct: 1789 gctcattgtggtagacgcagctgaccacctag 1758



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 249  ctctccacattctcgccctcgaagcagtggaa 280
            |||||||| |||||||| || |||||||||||
Sbjct: 1466 ctctccacgttctcgccgtcaaagcagtggaa 1435
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>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 363  agctcctgctccacgatgttgttgcagtc 391
            |||||||||||||| ||||||||||||||
Sbjct: 1607 agctcctgctccaccatgttgttgcagtc 1579



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 1    gctcattgtggcagacgcagcaaaccacctag 32
            ||||||||||| |||||||||  |||||||||
Sbjct: 2038 gctcattgtggtagacgcagctgaccacctag 2007



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 249  ctctccacattctcgccctcgaagcagtggaa 280
            |||||||| |||||||| || |||||||||||
Sbjct: 1715 ctctccacgttctcgccgtcaaagcagtggaa 1684
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>ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0400)
           partial mRNA
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 372 tccacgatgttgttgcagtcgt 393
           ||||||||||||||||||||||
Sbjct: 88  tccacgatgttgttgcagtcgt 67
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>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 372   tccacgatgttgttgcagtcgt 393
             ||||||||||||||||||||||
Sbjct: 55310 tccacgatgttgttgcagtcgt 55331
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>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 223   tgccttccttgaccagagggt 243
             |||||||||||||||||||||
Sbjct: 51033 tgccttccttgaccagagggt 51053
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>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 177   tccagagaatcctcctccgcc 197
             |||||||||||||||||||||
Sbjct: 94892 tccagagaatcctcctccgcc 94912
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>dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, complete cds
          Length = 8881

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 177  tccagagaatcctcctccgcc 197
            |||||||||||||||||||||
Sbjct: 4201 tccagagaatcctcctccgcc 4181
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>ref|XM_468482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  agctcctgctccacgatgtt 382
            ||||||||||||||||||||
Sbjct: 1430 agctcctgctccacgatgtt 1411
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>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 396    gcctcggcgtcgagcttcttgccc 419
              ||||||||| ||||||||||||||
Sbjct: 194781 gcctcggcggcgagcttcttgccc 194804
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 288    ctgggcgacccggcggagac 307
              ||||||||||||||||||||
Sbjct: 276909 ctgggcgacccggcggagac 276890
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 9        tggcagacgcagcaaaccacctag 32
                ||||||||||||||||||| ||||
Sbjct: 15331175 tggcagacgcagcaaaccatctag 15331198
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 363      agctcctgctccacgatgtt 382
                ||||||||||||||||||||
Sbjct: 35459486 agctcctgctccacgatgtt 35459505
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0418B08
          Length = 165909

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 9      tggcagacgcagcaaaccacctag 32
              ||||||||||||||||||| ||||
Sbjct: 110364 tggcagacgcagcaaaccatctag 110387
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>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1  gene for
            S-adenosylmethionine decarboxylase, complete cds
          Length = 2952

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tggcagacgcagcaaaccacctag 32
            ||||||||||||||||||| ||||
Sbjct: 2817 tggcagacgcagcaaaccatctag 2794
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   agctcctgctccacgatgtt 382
             ||||||||||||||||||||
Sbjct: 71007 agctcctgctccacgatgtt 71026
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>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full
            insert sequence
          Length = 2047

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tggcagacgcagcaaaccacctag 32
            ||||||||||||||||||| ||||
Sbjct: 1917 tggcagacgcagcaaaccatctag 1894
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>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full
            insert sequence
          Length = 2002

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tggcagacgcagcaaaccacctag 32
            ||||||||||||||||||| ||||
Sbjct: 1918 tggcagacgcagcaaaccatctag 1895
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>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full
            insert sequence
          Length = 2546

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tggcagacgcagcaaaccacctag 32
            ||||||||||||||||||| ||||
Sbjct: 2443 tggcagacgcagcaaaccatctag 2420
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>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full
            insert sequence
          Length = 2034

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    tggcagacgcagcaaaccacctag 32
            ||||||||||||||||||| ||||
Sbjct: 1917 tggcagacgcagcaaaccatctag 1894
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>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tgcttcacagtaaccaaaac 92
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     cggcgtggccgcggccaccg 446
               ||||||||||||||||||||
Sbjct: 1560130 cggcgtggccgcggccaccg 1560149


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,217,378
Number of Sequences: 3902068
Number of extensions: 3217378
Number of successful extensions: 86937
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86696
Number of HSP's gapped (non-prelim): 234
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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