ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31j23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465979.1| Oryza sativa (japonica cultivar-group), mRNA 200 4e-48
2dbj|AK103390.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
3gb|AY109525.1| Zea mays CL5474_1 mRNA sequence 170 4e-39
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
5dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
6dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
7gb|AY645947.1| Zea mays transposon helitron, complete sequence 100 1e-17
8ref|NM_113578.3| Arabidopsis thaliana unknown protein AT3G26670 ... 94 7e-16
9ref|NM_202638.1| Arabidopsis thaliana unknown protein AT3G26670 ... 94 7e-16
10ref|NM_180303.1| Arabidopsis thaliana unknown protein AT3G26670 ... 94 7e-16
11gb|AY093129.1| Arabidopsis thaliana unknown protein (At3g26670) ... 94 7e-16
12gb|BT006587.1| Arabidopsis thaliana At3g26670 mRNA, complete cds 94 7e-16
13emb|BX824813.1|CNS0A6OZ Arabidopsis thaliana Full-length cDNA Co... 94 7e-16
14emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence 78 4e-11
15dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 78 4e-11
16gb|AY112446.1| Zea mays CL5474_-4 mRNA sequence 78 4e-11
17gb|AY110963.1| Zea mays CL5474_2 mRNA sequence 66 2e-07
18gb|AC157741.2| Xenopus tropicalis clone ISB1-51N1, complete sequ... 42 2.3
19ref|XM_716690.1| Candida albicans SC5314 putative GTP/GDP exchan... 42 2.3
20ref|XM_716569.1| Candida albicans SC5314 putative GTP/GDP exchan... 42 2.3
21emb|AL008720.1|HS343C1 Human DNA sequence from clone CTA-343C1 o... 42 2.3
22gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha... 42 2.3
23gb|AC166493.6| Mus musculus chromosome 1, clone RP24-317E14, com... 40 9.1
24gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome... 40 9.1
25gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, co... 40 9.1
26gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, compl... 40 9.1
27gb|AC127577.4| Mus musculus BAC clone RP24-243K23 from chromosom... 40 9.1
28gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome... 40 9.1
29gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome ... 40 9.1
30gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, comp... 40 9.1
31emb|AL109983.2|HSJ718P11 Human DNA sequence from clone RP4-718P1... 40 9.1
32dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.1
33gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete... 40 9.1
34gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosom... 40 9.1
35dbj|AK034646.1| Mus musculus 12 days embryo embryonic body betwe... 40 9.1
36dbj|AK076571.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.1
37gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cance... 40 9.1
38gb|AC153661.4| Mus musculus BAC clone RP23-152L5 from chromosome... 40 9.1
39gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, comple... 40 9.1
40dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
41dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
42dbj|AB161363.1| Cavia porcellus caltrinII gene for calcium trans... 40 9.1
43dbj|AB110281.1| Arthroderma simii top2 gene for DNA topoisomeras... 40 9.1
44dbj|AB110280.1| Arthroderma simii top2 gene for DNA topoisomeras... 40 9.1
45gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, co... 40 9.1
46gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.1 
>ref|XM_465979.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1892

 Score =  200 bits (101), Expect = 4e-48
 Identities = 152/169 (89%)
 Strand = Plus / Minus

                                                                        
Query: 202  tgtactttaatcggtcagttcgaattcctctaaaccctgttgttctcgaggaaaccattg 261
            |||||||| ||||||| |||   |||||||| |||||||||||||  ||||| ||||| |
Sbjct: 1569 tgtactttgatcggtcggttgcgattcctctgaaccctgttgttcgtgaggagaccatcg 1510

                                                                        
Query: 262  gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
            |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gcatcgcaagcaccgatgaagcgctgatggtctcctccccaaggccaagtgacatggagc 1450

                                                             
Query: 322  aagccgactttgccctcgacaatatgcgttttgctttcactcttactga 370
            |||||||||||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 1449 aagccgactttgccttggacagtatgcgttttgcttttacttttactga 1401



 Score =  123 bits (62), Expect = 8e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 540  atgcctatgaagacaaatgtcatgcccaacacgaacattattatcctgagcgtatcgaac 599
            |||||||| |||||| ||||||||||||| || ||||| | |||||| || ||||| || 
Sbjct: 1270 atgcctataaagacagatgtcatgcccaatacaaacatcactatcctcagggtatcaaat 1211

                                                                        
Query: 600  acttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaatc 659
            |||||||| ||||||||||| ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 1210 acttgatattcttgaaagtacacaaatcctgtgcaaatagaaaaaaaggtccaagcaatc 1151

                      
Query: 660  tgaaacattg 669
            ||||||||||
Sbjct: 1150 tgaaacattg 1141



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 36   aactatacactgatgttacagctaa 60
            ||||||||||| |||||||||||||
Sbjct: 1747 aactatacactcatgttacagctaa 1723
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>dbj|AK103390.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127K21, full
            insert sequence
          Length = 1892

 Score =  200 bits (101), Expect = 4e-48
 Identities = 152/169 (89%)
 Strand = Plus / Minus

                                                                        
Query: 202  tgtactttaatcggtcagttcgaattcctctaaaccctgttgttctcgaggaaaccattg 261
            |||||||| ||||||| |||   |||||||| |||||||||||||  ||||| ||||| |
Sbjct: 1569 tgtactttgatcggtcggttgcgattcctctgaaccctgttgttcgtgaggagaccatcg 1510

                                                                        
Query: 262  gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
            |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gcatcgcaagcaccgatgaagcgctgatggtctcctccccaaggccaagtgacatggagc 1450

                                                             
Query: 322  aagccgactttgccctcgacaatatgcgttttgctttcactcttactga 370
            |||||||||||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 1449 aagccgactttgccttggacagtatgcgttttgcttttacttttactga 1401



 Score =  123 bits (62), Expect = 8e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                        
Query: 540  atgcctatgaagacaaatgtcatgcccaacacgaacattattatcctgagcgtatcgaac 599
            |||||||| |||||| ||||||||||||| || ||||| | |||||| || ||||| || 
Sbjct: 1270 atgcctataaagacagatgtcatgcccaatacaaacatcactatcctcagggtatcaaat 1211

                                                                        
Query: 600  acttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaatc 659
            |||||||| ||||||||||| ||||||||||| |||||||| || || ||||| ||||||
Sbjct: 1210 acttgatattcttgaaagtacacaaatcctgtgcaaatagaaaaaaaggtccaagcaatc 1151

                      
Query: 660  tgaaacattg 669
            ||||||||||
Sbjct: 1150 tgaaacattg 1141



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 36   aactatacactgatgttacagctaa 60
            ||||||||||| |||||||||||||
Sbjct: 1747 aactatacactcatgttacagctaa 1723
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>gb|AY109525.1| Zea mays CL5474_1 mRNA sequence
          Length = 1000

 Score =  170 bits (86), Expect = 4e-39
 Identities = 152/174 (87%)
 Strand = Plus / Plus

                                                                       
Query: 496 catctttggtgtcagctttattttcatcaggtgctagcagggatatgcctatgaagacaa 555
           ||||||| || ||||||||| | ||||| |||||||||| ||| || || |  |||||||
Sbjct: 571 catctttcgtatcagctttagtgtcatcgggtgctagcaaggagatcccaacaaagacaa 630

                                                                       
Query: 556 atgtcatgcccaacacgaacattattatcctgagcgtatcgaacacttgatactcttgaa 615
           ||||||||||||| || | ||| ||||||||||||||||| || |||||||| |||||||
Sbjct: 631 atgtcatgcccaatacaaccataattatcctgagcgtatcaaatacttgatattcttgaa 690

                                                                 
Query: 616 agtaaacaaatcctgtacaaatagagaagaaagtccatgcaatctgaaacattg 669
           ||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||||
Sbjct: 691 agtaaacaaatcctgtacagatagagaagaaggtccaagcaatttgaaacattg 744



 Score =  101 bits (51), Expect = 3e-18
 Identities = 114/135 (84%)
 Strand = Plus / Plus

                                                                       
Query: 224 aattcctctaaaccctgttgttctcgaggaaaccattggcattgcaagcaccgaagaagc 283
           ||||||||| || || |||||||| || || ||||| ||||| |||||||| || |||||
Sbjct: 326 aattcctctgaagccggttgttcttgatgagaccataggcatggcaagcacggacgaagc 385

                                                                       
Query: 284 gctgatggtctcctccccaaggccaagtgacatggagcaagccgactttgccctcgacaa 343
           ||| || || ||||||||||||||||| ||||||||||| || ||||||||| || ||| 
Sbjct: 386 gcttattgtgtcctccccaaggccaagggacatggagcatgcagactttgccttcaacag 445

                          
Query: 344 tatgcgttttgcttt 358
           ||  |||||||||||
Sbjct: 446 tacacgttttgcttt 460
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 4e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                            
Query: 202      tgtactttaatcggtcagttcgaattcctctaaaccctgttgttctcgaggaaaccattg 261
                |||||||| ||||||| |||   |||||||| |||||||||||||  ||||| ||||| |
Sbjct: 18846743 tgtactttgatcggtcggttgcgattcctctgaaccctgttgttcgtgaggagaccatcg 18846802

                                                                            
Query: 262      gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
                |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18846803 gcatcgcaagcaccgatgaagcgctgatggtctcctccccaaggccaagtgacatggagc 18846862

                         
Query: 322      aagccgact 330
                |||||||||
Sbjct: 18846863 aagccgact 18846871



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                            
Query: 599      cacttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaat 658
                ||||||||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 18847450 cacttgatattcttgaaagtacacaaatcctgtgcaaatagaaaaaaaggtccaagcaat 18847509

                           
Query: 659      ctgaaacattg 669
                |||||||||||
Sbjct: 18847510 ctgaaacattg 18847520



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 540      atgcctatgaagacaaatgtcatgcccaacacgaacattattatcctgagcgtatc 595
                |||||||| |||||| ||||||||||||| || ||||| | |||||| || |||||
Sbjct: 18847304 atgcctataaagacagatgtcatgcccaatacaaacatcactatcctcagggtatc 18847359



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 329      ctttgccctcgacaatatgcgttttgctttcactcttactga 370
                ||||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 18846950 ctttgccttggacagtatgcgttttgcttttacttttactga 18846991



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 36       aactatacactgatgttacagctaa 60
                ||||||||||| |||||||||||||
Sbjct: 18846565 aactatacactcatgttacagctaa 18846589



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 477      tcctttttggagttagagtc 496
                ||||||||||||||||||||
Sbjct: 22389200 tcctttttggagttagagtc 22389181
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>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa257A21
          Length = 34833

 Score =  161 bits (81), Expect = 4e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                         
Query: 202   tgtactttaatcggtcagttcgaattcctctaaaccctgttgttctcgaggaaaccattg 261
             |||||||| ||||||| |||   |||||||| |||||||||||||  ||||| ||||| |
Sbjct: 30985 tgtactttgatcggtcggttgcgattcctctgaaccctgttgttcgtgaggagaccatcg 31044

                                                                         
Query: 262   gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
             |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31045 gcatcgcaagcaccgatgaagcgctgatggtctcctccccaaggccaagtgacatggagc 31104

                      
Query: 322   aagccgact 330
             |||||||||
Sbjct: 31105 aagccgact 31113



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 599   cacttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaat 658
             ||||||||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 31692 cacttgatattcttgaaagtacacaaatcctgtgcaaatagaaaaaaaggtccaagcaat 31751

                        
Query: 659   ctgaaacattg 669
             |||||||||||
Sbjct: 31752 ctgaaacattg 31762



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 540   atgcctatgaagacaaatgtcatgcccaacacgaacattattatcctgagcgtatc 595
             |||||||| |||||| ||||||||||||| || ||||| | |||||| || |||||
Sbjct: 31546 atgcctataaagacagatgtcatgcccaatacaaacatcactatcctcagggtatc 31601



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 329   ctttgccctcgacaatatgcgttttgctttcactcttactga 370
             ||||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 31192 ctttgccttggacagtatgcgttttgcttttacttttactga 31233



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    aactatacactgatgttacagctaa 60
             ||||||||||| |||||||||||||
Sbjct: 30807 aactatacactcatgttacagctaa 30831
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>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461D06
          Length = 112895

 Score =  161 bits (81), Expect = 4e-36
 Identities = 117/129 (90%)
 Strand = Plus / Plus

                                                                         
Query: 202   tgtactttaatcggtcagttcgaattcctctaaaccctgttgttctcgaggaaaccattg 261
             |||||||| ||||||| |||   |||||||| |||||||||||||  ||||| ||||| |
Sbjct: 10276 tgtactttgatcggtcggttgcgattcctctgaaccctgttgttcgtgaggagaccatcg 10335

                                                                         
Query: 262   gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
             |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10336 gcatcgcaagcaccgatgaagcgctgatggtctcctccccaaggccaagtgacatggagc 10395

                      
Query: 322   aagccgact 330
             |||||||||
Sbjct: 10396 aagccgact 10404



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                         
Query: 599   cacttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaat 658
             ||||||||| ||||||||||| ||||||||||| |||||||| || || ||||| |||||
Sbjct: 10983 cacttgatattcttgaaagtacacaaatcctgtgcaaatagaaaaaaaggtccaagcaat 11042

                        
Query: 659   ctgaaacattg 669
             |||||||||||
Sbjct: 11043 ctgaaacattg 11053



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 540   atgcctatgaagacaaatgtcatgcccaacacgaacattattatcctgagcgtatc 595
             |||||||| |||||| ||||||||||||| || ||||| | |||||| || |||||
Sbjct: 10837 atgcctataaagacagatgtcatgcccaatacaaacatcactatcctcagggtatc 10892



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 329   ctttgccctcgacaatatgcgttttgctttcactcttactga 370
             ||||||| | |||| ||||||||||||||| ||| |||||||
Sbjct: 10483 ctttgccttggacagtatgcgttttgcttttacttttactga 10524



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 36    aactatacactgatgttacagctaa 60
             ||||||||||| |||||||||||||
Sbjct: 10098 aactatacactcatgttacagctaa 10122
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>gb|AY645947.1| Zea mays transposon helitron, complete sequence
          Length = 6525

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 65/70 (92%)
 Strand = Plus / Minus

                                                                        
Query: 600  acttgatactcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaatc 659
            |||||||| |||||||||||||||||||||||||||||||||||||| |||||  |||| 
Sbjct: 5212 acttgatattcttgaaagtaaacaaatcctgtacaaatagagaagaaggtccaaacaatt 5153

                      
Query: 660  tgaaacattg 669
            ||||||||||
Sbjct: 5152 tgaaacattg 5143



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                        
Query: 225  attcctctaaaccctgttgttctcgaggaaaccattggcattgcaagcaccgaagaagcg 284
            |||||||| || || |||||||| || || |||||  |||| ||||||||||| ||||||
Sbjct: 5893 attcctctgaagccggttgttcttgacgagaccataagcatggcaagcaccgatgaagcg 5834

                                                  
Query: 285  ctgatggtctcctccccaaggccaagtgacatggagca 322
            || |||||   ||||||||||||||| |||||||||||
Sbjct: 5833 cttatggtgctctccccaaggccaagggacatggagca 5796



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/47 (91%), Gaps = 2/47 (4%)
 Strand = Plus / Minus

                                                           
Query: 549  aagacaaatgtcatgcccaacacgaacattattatcctgagcgtatc 595
            ||||||||||||||||| |||||  |||| |||||||||||||||||
Sbjct: 5348 aagacaaatgtcatgcctaacac--acataattatcctgagcgtatc 5304
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>ref|NM_113578.3| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
            AT3G26670.1 mRNA, complete cds
          Length = 1794

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
            |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 1147 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 1088

                                                                        
Query: 579  attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
             || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 1087 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 1028

                                           
Query: 639  gagaagaaagtccatgcaatctgaaacattg 669
            |||||||||||||| ||||||||||||||||
Sbjct: 1027 gagaagaaagtccaagcaatctgaaacattg 997
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>ref|NM_202638.1| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
            AT3G26670.3 mRNA, complete cds
          Length = 1851

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
            |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 1204 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 1145

                                                                        
Query: 579  attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
             || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 1144 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 1085

                                           
Query: 639  gagaagaaagtccatgcaatctgaaacattg 669
            |||||||||||||| ||||||||||||||||
Sbjct: 1084 gagaagaaagtccaagcaatctgaaacattg 1054
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>ref|NM_180303.1| Arabidopsis thaliana unknown protein AT3G26670 transcript variant
            AT3G26670.2 mRNA, complete cds
          Length = 1953

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
            |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 1306 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 1247

                                                                        
Query: 579  attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
             || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 1246 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 1187

                                           
Query: 639  gagaagaaagtccatgcaatctgaaacattg 669
            |||||||||||||| ||||||||||||||||
Sbjct: 1186 gagaagaaagtccaagcaatctgaaacattg 1156
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>gb|AY093129.1| Arabidopsis thaliana unknown protein (At3g26670) mRNA, complete cds
          Length = 1791

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
            |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 1147 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 1088

                                                                        
Query: 579  attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
             || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 1087 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 1028

                                           
Query: 639  gagaagaaagtccatgcaatctgaaacattg 669
            |||||||||||||| ||||||||||||||||
Sbjct: 1027 gagaagaaagtccaagcaatctgaaacattg 997
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>gb|BT006587.1| Arabidopsis thaliana At3g26670 mRNA, complete cds
          Length = 1326

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                       
Query: 519 tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
           |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 929 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 870

                                                                       
Query: 579 attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
            || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 869 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 810

                                          
Query: 639 gagaagaaagtccatgcaatctgaaacattg 669
           |||||||||||||| ||||||||||||||||
Sbjct: 809 gagaagaaagtccaagcaatctgaaacattg 779
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>emb|BX824813.1|CNS0A6OZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH74ZG07 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1788

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 125/151 (82%)
 Strand = Plus / Minus

                                                                        
Query: 519  tcatcaggtgctagcagggatatgcctatgaagacaaatgtcatgcccaacacgaacatt 578
            |||||||||||||| |  || ||||||||||| ||| |  |||| || || | |||||||
Sbjct: 1204 tcatcaggtgctagtaaagaaatgcctatgaatacacacatcattcctaatatgaacatt 1145

                                                                        
Query: 579  attatcctgagcgtatcgaacacttgatactcttgaaagtaaacaaatcctgtacaaata 638
             || | || |||| |||||| || ||| |||||||||||||||   |||||||||| || 
Sbjct: 1144 gttgttcttagcgcatcgaaaacctgaaactcttgaaagtaaatgcatcctgtacagatg 1085

                                           
Query: 639  gagaagaaagtccatgcaatctgaaacattg 669
            |||||||||||||| ||||||||||||||||
Sbjct: 1084 gagaagaaagtccaagcaatctgaaacattg 1054
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>emb|X98130.1|AT81KBGEN Arabidopsis thaliana 81kb genomic sequence
          Length = 81493

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 607   actcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaatctgaaaca 666
             |||||||||||||||   |||||||||| || |||||||||||||| |||||||||||||
Sbjct: 51218 actcttgaaagtaaatgcatcctgtacagatggagaagaaagtccaagcaatctgaaaca 51277

                
Query: 667   ttg 669
             |||
Sbjct: 51278 ttg 51280
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>dbj|AB026648.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLJ15
          Length = 43481

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                        
Query: 607  actcttgaaagtaaacaaatcctgtacaaatagagaagaaagtccatgcaatctgaaaca 666
            |||||||||||||||   |||||||||| || |||||||||||||| |||||||||||||
Sbjct: 8979 actcttgaaagtaaatgcatcctgtacagatggagaagaaagtccaagcaatctgaaaca 9038

               
Query: 667  ttg 669
            |||
Sbjct: 9039 ttg 9041
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>gb|AY112446.1| Zea mays CL5474_-4 mRNA sequence
          Length = 594

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 83/98 (84%)
 Strand = Plus / Plus

                                                                       
Query: 225 attcctctaaaccctgttgttctcgaggaaaccattggcattgcaagcaccgaagaagcg 284
           |||||||| || || | |||||| || || ||||| ||||| ||||||||||| ||||||
Sbjct: 494 attcctctgaagccggntgttcttgatgagaccataggcatggcaagcaccgatgaagcg 553

                                                 
Query: 285 ctgatggtctcctccccaaggccaagtgacatggagca 322
           || |||||   ||||||||||||||| |||||||||||
Sbjct: 554 cttatggtgctctccccaaggccaagggacatggagca 591
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>gb|AY110963.1| Zea mays CL5474_2 mRNA sequence
          Length = 707

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 262 gcattgcaagcaccgaagaagcgctgatggtctcctccccaaggccaagtgacatggagc 321
           |||| ||||||||||| |||||||| |||||   ||||||||||||||| ||||||||||
Sbjct: 427 gcatggcaagcaccgatgaagcgcttatggtgctctccccaaggccaagggacatggagc 486

            
Query: 322 a 322
           |
Sbjct: 487 a 487



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/46 (91%), Gaps = 2/46 (4%)
 Strand = Plus / Plus

                                                         
Query: 549 aagacaaatgtcatgcccaacacgaacattattatcctgagcgtat 594
           ||||||||||||||||| |||||  |||| ||||||||||||||||
Sbjct: 645 aagacaaatgtcatgcctaacac--acataattatcctgagcgtat 688
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>gb|AC157741.2| Xenopus tropicalis clone ISB1-51N1, complete sequence
          Length = 58027

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 187   tggagcgcaggggggtgtactttaa 211
             ||||||||||||||||||| |||||
Sbjct: 11911 tggagcgcaggggggtgtattttaa 11887
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>ref|XM_716690.1| Candida albicans SC5314 putative GTP/GDP exchange factor for ARF,
           fragment (CaO19_1712), mRNA
          Length = 438

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 cagctttattttcatcaggtg 528
           |||||||||||||||||||||
Sbjct: 185 cagctttattttcatcaggtg 205
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>ref|XM_716569.1| Candida albicans SC5314 putative GTP/GDP exchange factor for ARF,
           fragment (CaO19_9279), mRNA
          Length = 438

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 508 cagctttattttcatcaggtg 528
           |||||||||||||||||||||
Sbjct: 185 cagctttattttcatcaggtg 205
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>emb|AL008720.1|HS343C1 Human DNA sequence from clone CTA-343C1 on chromosome 22, complete
             sequence
          Length = 198570

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   ttcctctaaaccctgttgttc 246
             |||||||||||||||||||||
Sbjct: 81497 ttcctctaaaccctgttgttc 81477
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>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 74316

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 413  cggcaactttcttggcctgcaattt 437
            |||||||||| ||||||||||||||
Sbjct: 5011 cggcaacttttttggcctgcaattt 5035
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>gb|AC166493.6| Mus musculus chromosome 1, clone RP24-317E14, complete sequence
          Length = 178538

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 430   tgcaatttcctggtacatgt 449
             ||||||||||||||||||||
Sbjct: 56245 tgcaatttcctggtacatgt 56226
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>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence
          Length = 177843

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 536    ggatatgcctatgaagacaa 555
              ||||||||||||||||||||
Sbjct: 173407 ggatatgcctatgaagacaa 173426
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>gb|AC133579.10| Mus musculus chromosome 7, clone RP23-222I22, complete sequence
          Length = 197206

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 629    tgtacaaatagagaagaaag 648
              ||||||||||||||||||||
Sbjct: 105810 tgtacaaatagagaagaaag 105829
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>gb|AC102652.9| Mus musculus chromosome 6, clone RP23-20L3, complete sequence
          Length = 229752

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    gagaatgttacaaggggaaa 29
             ||||||||||||||||||||
Sbjct: 23832 gagaatgttacaaggggaaa 23851
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>gb|AC127577.4| Mus musculus BAC clone RP24-243K23 from chromosome 6, complete sequence
          Length = 154273

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   aatagcaatataaaagaata 132
             ||||||||||||||||||||
Sbjct: 22082 aatagcaatataaaagaata 22101
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>gb|AC130541.4| Mus musculus BAC clone RP24-124P9 from chromosome 3, complete sequence
          Length = 191814

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      tggagaatgttacaagggga 27
              ||||||||||||||||||||
Sbjct: 139411 tggagaatgttacaagggga 139392
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>gb|AC122910.5| Mus musculus BAC clone RP23-54P3 from chromosome 6, complete sequence
          Length = 221390

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    aatagcaatataaaagaata 132
              ||||||||||||||||||||
Sbjct: 202303 aatagcaatataaaagaata 202322
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>gb|AC138263.8| Mus musculus chromosome 6, clone RP23-291O5, complete sequence
          Length = 206016

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    ggatatgcctatgaagacaa 555
              ||||||||||||||||||||
Sbjct: 149740 ggatatgcctatgaagacaa 149721
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>emb|AL109983.2|HSJ718P11 Human DNA sequence from clone RP4-718P11 on chromosome 20p12.1-12.3
             Contains part of the SPTLC2L gene for serine
             palmitoyltransferase long chain base subunit 2-like
             (aminotransferase 2), complete sequence
          Length = 104913

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    caattgctttgggaagtacaaaca 105
             ||||||||||||| ||||||||||
Sbjct: 99427 caattgctttggggagtacaaaca 99450
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     ccgaagaagcgctgatggtc 293
               ||||||||||||||||||||
Sbjct: 1960266 ccgaagaagcgctgatggtc 1960247
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>gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete sequence
          Length = 191883

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 633    caaatagagaagaaagtcca 652
              ||||||||||||||||||||
Sbjct: 108936 caaatagagaagaaagtcca 108955
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>gb|AC149217.4| Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence
          Length = 205466

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 629   tgtacaaatagagaagaaag 648
             ||||||||||||||||||||
Sbjct: 20157 tgtacaaatagagaagaaag 20138
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>dbj|AK034646.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430018G01 product:unclassifiable, full insert
            sequence
          Length = 4096

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   gagaatgttacaaggggaaa 29
            ||||||||||||||||||||
Sbjct: 3913 gagaatgttacaaggggaaa 3894
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>dbj|AK076571.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921515N08 product:unclassifiable, full
           insert sequence
          Length = 3604

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  gagaatgttacaaggggaaa 29
           ||||||||||||||||||||
Sbjct: 476 gagaatgttacaaggggaaa 457
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>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 202028

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  gagaatgttacaaggggaaa 29
           ||||||||||||||||||||
Sbjct: 231 gagaatgttacaaggggaaa 212
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>gb|AC153661.4| Mus musculus BAC clone RP23-152L5 from chromosome 3, complete sequence
          Length = 203476

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tggagaatgttacaagggga 27
             ||||||||||||||||||||
Sbjct: 45862 tggagaatgttacaagggga 45843
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>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence
          Length = 191594

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 630    gtacaaatagagaagaaagt 649
              ||||||||||||||||||||
Sbjct: 110089 gtacaaatagagaagaaagt 110070
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>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1267B06
          Length = 156989

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    tcctttttggagttagagtc 496
              ||||||||||||||||||||
Sbjct: 147844 tcctttttggagttagagtc 147825
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>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1115_A05
          Length = 113326

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tcctttttggagttagagtc 496
             ||||||||||||||||||||
Sbjct: 45419 tcctttttggagttagagtc 45400
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>dbj|AB161363.1| Cavia porcellus caltrinII gene for calcium transport inhibitor
            caltrinII, complete cds
          Length = 5451

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 636  atagagaagaaagtccatgcaatc 659
            |||||||||||||||||| |||||
Sbjct: 2032 atagagaagaaagtccattcaatc 2055
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>dbj|AB110281.1| Arthroderma simii top2 gene for DNA topoisomerase II, partial cds,
            strain:CBS 520.75
          Length = 3499

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 496  catctttggtgtcagctttattttcatc 523
            ||||||||||| ||||||||||| ||||
Sbjct: 1385 catctttggtgccagctttatttgcatc 1358
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>dbj|AB110280.1| Arthroderma simii top2 gene for DNA topoisomerase II, partial cds,
            strain:CBS 417.65
          Length = 3499

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 496  catctttggtgtcagctttattttcatc 523
            ||||||||||| ||||||||||| ||||
Sbjct: 1385 catctttggtgccagctttatttgcatc 1358
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>gb|AC119176.10| Mus musculus chromosome 1, clone RP24-359F24, complete sequence
          Length = 208009

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    tgcaatttcctggtacatgt 449
              ||||||||||||||||||||
Sbjct: 205448 tgcaatttcctggtacatgt 205467
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     ccgaagaagcgctgatggtc 293
               ||||||||||||||||||||
Sbjct: 1982315 ccgaagaagcgctgatggtc 1982296


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,036,313
Number of Sequences: 3902068
Number of extensions: 6036313
Number of successful extensions: 110927
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110721
Number of HSP's gapped (non-prelim): 203
length of query: 669
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 646
effective length of database: 17,143,297,704
effective search space: 11074570316784
effective search space used: 11074570316784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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