ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal prot... 418 e-114
2gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, part... 309 2e-81
3gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA,... 309 2e-81
4gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, comp... 234 1e-58
5dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 8e-35
6dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 8e-35
7dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 8e-35
8gb|BT016582.1| Zea mays clone Contig415 mRNA sequence 125 7e-26
9gb|AY103554.1| Zea mays PCO154340 mRNA sequence 125 7e-26
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 4e-24
11gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 119 4e-24
12gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare sta... 119 4e-24
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 4e-24
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
15dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
16dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
17ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA 90 4e-15
18gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence 90 4e-15
19gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA,... 84 2e-13
20dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone... 66 5e-08
21gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome... 58 1e-05
22gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 58 1e-05
23gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal ... 58 1e-05
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 58 1e-05
25dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
26dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
27dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 1e-05
28gb|DQ377970.1| Populus x canadensis putative 40S ribosomal prote... 48 0.013
29emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17... 42 0.79
30gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Can... 40 3.1
31gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S... 40 3.1 
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene)
          Length = 852

 Score =  418 bits (211), Expect = e-114
 Identities = 232/242 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggaatacattgatagcacagctaactgaagcatnaaccaaaacatttggntacgaaga 60
           ||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 733 ctggaatacattgatagcacaactaactgaagcatcaaccaaaacatttggatacgaaga 674

                                                                       
Query: 61  tatgaaanggagacattcaaggcntnggtcttcatgcggtttcggccacagggnactcan 120
           ||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||| 
Sbjct: 673 tatgaaatggagacattcaaggcattggtcttcatgcggtttcggccacagggtactcaa 614

                                                                       
Query: 121 agacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctccagcttgtatt 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agacaacgtctttcccgcaaagcctgcggtagactgcagagaaggtctccagcttgtatt 554

                                                                       
Query: 181 cagtgttgttgcgctcctttgggtccaagtngatcttgatgaccttggcaccatccaaac 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 553 cagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggcaccatccaaac 494

             
Query: 241 gg 242
           ||
Sbjct: 493 gg 492
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>gb|AF542971.1| Triticum aestivum ribosomal protein S7 mRNA, partial cds
          Length = 392

 Score =  309 bits (156), Expect = 2e-81
 Identities = 220/243 (90%), Gaps = 1/243 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggaatacattgatagcacagctaactgaagcatnaaccaaaacatttggntacgaa-g 59
           ||||||||||||||||||||| |||||  |  | | ||||||||||||||| |  ||| |
Sbjct: 263 ctggaatacattgatagcacaactaaccaagacctcaaccaaaacatttggatcagaaag 204

                                                                       
Query: 60  atatgaaanggagacattcaaggcntnggtcttcatgcggtttcggccacagggnactca 119
           |||||||| ||||||||||||||| | | |||||| |||||||| | ||||||| |||||
Sbjct: 203 atatgaaatggagacattcaaggcatggatcttcaggcggtttcagtcacagggtactca 144

                                                                       
Query: 120 nagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctccagcttgtat 179
            ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aagacaacgtctttcccacaaagcctgcggtagactgcagagaaggtctccagcttgtat 84

                                                                       
Query: 180 tcagtgttgttgcgctcctttgggtccaagtngatcttgatgaccttggcaccatccaaa 239
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 83  tcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggcaccatccaaa 24

              
Query: 240 cgg 242
           |||
Sbjct: 23  cgg 21
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>gb|AY290724.1| Triticum aestivum ribosomal protein S7-like mRNA, partial sequence
          Length = 393

 Score =  309 bits (156), Expect = 2e-81
 Identities = 220/243 (90%), Gaps = 1/243 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctggaatacattgatagcacagctaactgaagcatnaaccaaaacatttggntacgaa-g 59
           ||||||||||||||||||||| |||||  |  | | ||||||||||||||| |  ||| |
Sbjct: 264 ctggaatacattgatagcacaactaaccaagacctcaaccaaaacatttggatcagaaag 205

                                                                       
Query: 60  atatgaaanggagacattcaaggcntnggtcttcatgcggtttcggccacagggnactca 119
           |||||||| ||||||||||||||| | | |||||| |||||||| | ||||||| |||||
Sbjct: 204 atatgaaatggagacattcaaggcatggatcttcaggcggtttcagtcacagggtactca 145

                                                                       
Query: 120 nagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctccagcttgtat 179
            ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aagacaacgtctttcccacaaagcctgcggtagactgcagagaaggtctccagcttgtat 85

                                                                       
Query: 180 tcagtgttgttgcgctcctttgggtccaagtngatcttgatgaccttggcaccatccaaa 239
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 84  tcagtgttgttgcgctcctttgggtccaagtagatcttgatgaccttggcaccatccaaa 25

              
Query: 240 cgg 242
           |||
Sbjct: 24  cgg 22
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>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds
          Length = 600

 Score =  234 bits (118), Expect = 1e-58
 Identities = 144/154 (93%)
 Strand = Plus / Minus

                                                                       
Query: 89  tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
           |||||| |||||||| | ||||||| ||||| ||||||||||||||||  ||||||||||
Sbjct: 599 tcttcaggcggtttcagtcacagggtactcaaagacaacgtctttcccacaaagcctgcg 540

                                                                       
Query: 149 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 539 gtagactgcagagaaggtctccagcttgtactcagtgttgttgcgctccttcgggtccaa 480

                                             
Query: 209 gtngatcttgatgaccttggcaccatccaaacgg 242
           || |||||||||||||||||||||||||||||||
Sbjct: 479 gtagatcttgatgaccttggcaccatccaaacgg 446
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>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full
           insert sequence
          Length = 966

 Score =  155 bits (78), Expect = 8e-35
 Identities = 134/154 (87%)
 Strand = Plus / Minus

                                                                       
Query: 89  tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
           |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 654 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 595

                                                                       
Query: 149 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 594 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 535

                                             
Query: 209 gtngatcttgatgaccttggcaccatccaaacgg 242
           |   ||||||||||||||||||||||||| ||||
Sbjct: 534 gaaaatcttgatgaccttggcaccatccagacgg 501
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>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full
           insert sequence
          Length = 811

 Score =  155 bits (78), Expect = 8e-35
 Identities = 134/154 (87%)
 Strand = Plus / Minus

                                                                       
Query: 89  tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
           |||||| || ||||| | || |||| ||||  || |||| ||||||||  ||||||||||
Sbjct: 576 tcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgcg 517

                                                                       
Query: 149 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 516 gtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtccaa 457

                                             
Query: 209 gtngatcttgatgaccttggcaccatccaaacgg 242
           |   ||||||||||||||||||||||||| ||||
Sbjct: 456 gaaaatcttgatgaccttggcaccatccagacgg 423
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>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full
           insert sequence
          Length = 830

 Score =  155 bits (78), Expect = 8e-35
 Identities = 134/154 (87%)
 Strand = Plus / Minus

                                                                       
Query: 89  tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
           |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 653 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 594

                                                                       
Query: 149 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 593 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 534

                                             
Query: 209 gtngatcttgatgaccttggcaccatccaaacgg 242
           |   ||||||||||||||||||||||||| ||||
Sbjct: 533 gaaaatcttgatgaccttggcaccatccagacgg 500
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>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence
          Length = 907

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/143 (85%)
 Strand = Plus / Minus

                                                                       
Query: 100 tttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcag 159
           |||||| || |||| ||||| |||| || ||||||||  | |||||||||||||| ||||
Sbjct: 676 tttcggtcatagggtactcaaagaccacatctttcccacacagcctgcggtagaccgcag 617

                                                                       
Query: 160 agaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtngatcttga 219
            | |||||||||||||||||||||||||||| | ||||||||||||||||   |||||||
Sbjct: 616 tgcaggtctccagcttgtattcagtgttgttcctctcctttgggtccaagaaaatcttga 557

                                  
Query: 220 tgaccttggcaccatccaaacgg 242
           | | ||||| |||||||| ||||
Sbjct: 556 taatcttggaaccatccagacgg 534
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>gb|AY103554.1| Zea mays PCO154340 mRNA sequence
          Length = 1075

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/143 (85%)
 Strand = Plus / Minus

                                                                       
Query: 100 tttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcag 159
           |||||| || |||| ||||| |||| || ||||||||  | |||||||||||||| ||||
Sbjct: 715 tttcggtcatagggtactcaaagaccacatctttcccacacagcctgcggtagaccgcag 656

                                                                       
Query: 160 agaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaagtngatcttga 219
            | |||||||||||||||||||||||||||| | ||||||||||||||||   |||||||
Sbjct: 655 tgcaggtctccagcttgtattcagtgttgttcctctcctttgggtccaagaaaatcttga 596

                                  
Query: 220 tgaccttggcaccatccaaacgg 242
           | | ||||| |||||||| ||||
Sbjct: 595 taatcttggaaccatccagacgg 573
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 89       tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
                |||||| || ||||| | || |||| ||||  || |||| ||||||||  ||||||||||
Sbjct: 10371758 tcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgcg 10371699

                                                                            
Query: 149      gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
                ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 10371698 gtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtccaa 10371639

                 
Query: 209      g 209
                |
Sbjct: 10371638 g 10371638



 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 89       tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
                |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 10367502 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 10367443

                                                                            
Query: 149      gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
                |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 10367442 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 10367383

                 
Query: 209      g 209
                |
Sbjct: 10367382 g 10367382



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 215      cttgatgaccttggcaccatccaaacgg 242
                ||||||||||||||||||||||| ||||
Sbjct: 10371383 cttgatgaccttggcaccatccagacgg 10371356



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 215      cttgatgaccttggcaccatccaaacgg 242
                ||||||||||||||||||||||| ||||
Sbjct: 10367128 cttgatgaccttggcaccatccagacgg 10367101
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                         
Query: 89    tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
             |||||| || ||||| | || |||| ||||  || |||| ||||||||  ||||||||||
Sbjct: 28311 tcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgcg 28252

                                                                         
Query: 149   gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
             ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 28251 gtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtccaa 28192

              
Query: 209   g 209
             |
Sbjct: 28191 g 28191



 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                         
Query: 89    tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
             |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 24055 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 23996

                                                                         
Query: 149   gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
             |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 23995 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 23936

              
Query: 209   g 209
             |
Sbjct: 23935 g 23935



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 215   cttgatgaccttggcaccatccaaacgg 242
             ||||||||||||||||||||||| ||||
Sbjct: 27936 cttgatgaccttggcaccatccagacgg 27909



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 215   cttgatgaccttggcaccatccaaacgg 242
             ||||||||||||||||||||||| ||||
Sbjct: 23681 cttgatgaccttggcaccatccagacgg 23654
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>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone
             OSJNBb0036D03, from chromosome 3, complete sequence
          Length = 125800

 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                         
Query: 89    tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
             |||||| || ||||| | || |||| ||||  || |||| ||||||||  ||||||||||
Sbjct: 85224 tcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgcg 85165

                                                                         
Query: 149   gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
             ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 85164 gtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtccaa 85105

              
Query: 209   g 209
             |
Sbjct: 85104 g 85104



 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                         
Query: 89    tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
             |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 80968 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 80909

                                                                         
Query: 149   gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
             |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 80908 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 80849

              
Query: 209   g 209
             |
Sbjct: 80848 g 80848



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 215   cttgatgaccttggcaccatccaaacgg 242
             ||||||||||||||||||||||| ||||
Sbjct: 84849 cttgatgaccttggcaccatccagacgg 84822



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 215   cttgatgaccttggcaccatccaaacgg 242
             ||||||||||||||||||||||| ||||
Sbjct: 80594 cttgatgaccttggcaccatccagacgg 80567
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 89       tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
                |||||| || ||||| | || |||| ||||  || |||| ||||||||  ||||||||||
Sbjct: 10369859 tcttcaagcagtttcagtcatagggtactcgaaggcaacatctttcccacaaagcctgcg 10369800

                                                                            
Query: 149      gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
                ||||||||| ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 10369799 gtagactgcggagaaggtctcaagcttgtattcggtattgttgcgctcctttgggtccaa 10369740

                 
Query: 209      g 209
                |
Sbjct: 10369739 g 10369739



 Score =  119 bits (60), Expect = 4e-24
 Identities = 105/121 (86%)
 Strand = Plus / Minus

                                                                            
Query: 89       tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
                |||||| || ||||| | || |||| ||||| || |||| ||||||||  ||||||||||
Sbjct: 10365603 tcttcaagcagtttcagtcatagggtactcaaaggcaacatctttcccacaaagcctgcg 10365544

                                                                            
Query: 149      gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
                |||||| || ||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct: 10365543 gtagaccgcggagaaggtctcgagcttgtattcggtattgttgcgctcctttgggtccaa 10365484

                 
Query: 209      g 209
                |
Sbjct: 10365483 g 10365483



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 215      cttgatgaccttggcaccatccaaacgg 242
                ||||||||||||||||||||||| ||||
Sbjct: 10369484 cttgatgaccttggcaccatccagacgg 10369457



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 215      cttgatgaccttggcaccatccaaacgg 242
                ||||||||||||||||||||||| ||||
Sbjct: 10365229 cttgatgaccttggcaccatccagacgg 10365202
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  107 bits (54), Expect = 2e-20
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                            
Query: 111      gggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctcc 170
                ||| ||||| || |||| ||||||||  ||||||| |||||||||||| |||||||||||
Sbjct: 13024240 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 13024299

                                                       
Query: 171      agcttgtattcagtgttgttgcgctcctttgggtccaag 209
                |||||||||||  | ||||||||||||||||| ||||||
Sbjct: 13024300 agcttgtattcgatattgttgcgctcctttggatccaag 13024338
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score =  107 bits (54), Expect = 2e-20
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                          
Query: 111    gggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctcc 170
              ||| ||||| || |||| ||||||||  ||||||| |||||||||||| |||||||||||
Sbjct: 133883 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 133942

                                                     
Query: 171    agcttgtattcagtgttgttgcgctcctttgggtccaag 209
              |||||||||||  | ||||||||||||||||| ||||||
Sbjct: 133943 agcttgtattcgatattgttgcgctcctttggatccaag 133981
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>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0476C12
          Length = 157570

 Score =  107 bits (54), Expect = 2e-20
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 111 gggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctcc 170
           ||| ||||| || |||| ||||||||  ||||||| |||||||||||| |||||||||||
Sbjct: 817 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 876

                                                  
Query: 171 agcttgtattcagtgttgttgcgctcctttgggtccaag 209
           |||||||||||  | ||||||||||||||||| ||||||
Sbjct: 877 agcttgtattcgatattgttgcgctcctttggatccaag 915
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>ref|XM_465276.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 339

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 75/86 (87%)
 Strand = Plus / Minus

                                                                       
Query: 111 gggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctcc 170
           ||| ||||| || |||| ||||||||  ||||||| |||||||||||| |||||||||||
Sbjct: 320 gggtactcaaaggcaacatctttcccacaaagcctacggtagactgcaaagaaggtctcc 261

                                     
Query: 171 agcttgtattcagtgttgttgcgctc 196
           |||||||||||  | |||||||||||
Sbjct: 260 agcttgtattcgatattgttgcgctc 235
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>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence
          Length = 840

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 110/133 (82%)
 Strand = Plus / Minus

                                                                       
Query: 110 agggnactcanagacaacgtctttcccgnaaagcctgcggtagactgcagagaaggtctc 169
           |||| ||||| |||| || ||||||||  | |||||||||||||| |||  | ||| |||
Sbjct: 629 agggtactcaaagaccacatctttcccacacagcctgcggtagaccgcaatgcagggctc 570

                                                                       
Query: 170 cagcttgtattcagtgttgttgcgctcctttgggtccaagtngatcttgatgaccttggc 229
           |||||||||||||| |||||| | ||||||||||||||||   |||||||| | ||||| 
Sbjct: 569 cagcttgtattcagagttgttcctctcctttgggtccaagaaaatcttgataatcttgga 510

                        
Query: 230 accatccaaacgg 242
            ||||||| ||||
Sbjct: 509 cccatccacacgg 497
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>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds
          Length = 819

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 89  tcttcatgcggtttcggccacagggnactcanagacaacgtctttcccgnaaagcctgcg 148
           |||||| || |||||||| || ||  ||||| | || || ||||| ||  ||||||||||
Sbjct: 617 tcttcaagcagtttcggcaaccggatactcatacaccacatctttgccacaaagcctgcg 558

                                                                       
Query: 149 gtagactgcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           ||| ||||||| |||||| |||| |||||| || ||||||||||| ||| ||||||||||
Sbjct: 557 gtacactgcagtgaaggtatccaacttgtactctgtgttgttgcgttccattgggtccaa 498

                         
Query: 209 gtngatcttgatga 222
           |  |||||| ||||
Sbjct: 497 gaagatcttaatga 484
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>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073,
             complete sequence
          Length = 90077

 Score = 65.9 bits (33), Expect = 5e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 165   gtctccagcttgtattcagtgttgttgcgctcctttgggtccaag 209
             |||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 14987 gtctccagcttgtactcagtgttgtttcgttcctttgggtccaag 14943
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>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01,
             complete sequence
          Length = 151938

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 171   agcttgtattcagtgttgttgcgctcctttgggtcca 207
             |||||||| || |||||||||||||||||||||||||
Sbjct: 14993 agcttgtactcggtgttgttgcgctcctttgggtcca 15029
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>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
              complete sequence
          Length = 143400

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 171    agcttgtattcagtgttgttgcgctcctttgggtcca 207
              |||||||| || |||||||||||||||||||||||||
Sbjct: 118806 agcttgtactcggtgttgttgcgctcctttgggtcca 118842
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>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7)
           mRNA, complete cds
          Length = 919

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 171 agcttgtattcagtgttgttgcgctcctttgggtcca 207
           |||||||| || |||||||||||||||||||||||||
Sbjct: 602 agcttgtactcggtgttgttgcgctcctttgggtcca 566
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 171      agcttgtattcagtgttgttgcgctcctttgggtcca 207
                |||||||| || |||||||||||||||||||||||||
Sbjct: 16167636 agcttgtactcggtgttgttgcgctcctttgggtcca 16167672
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>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full
           insert sequence
          Length = 910

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 171 agcttgtattcagtgttgttgcgctcctttgggtcca 207
           |||||||| || |||||||||||||||||||||||||
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtcca 577
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>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full
           insert sequence
          Length = 903

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 171 agcttgtattcagtgttgttgcgctcctttgggtcca 207
           |||||||| || |||||||||||||||||||||||||
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtcca 577
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>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full
           insert sequence
          Length = 910

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 171 agcttgtattcagtgttgttgcgctcctttgggtcca 207
           |||||||| || |||||||||||||||||||||||||
Sbjct: 613 agcttgtactcggtgttgttgcgctcctttgggtcca 577
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>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA,
           partial cds
          Length = 546

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 180 tcagtgttgttgcgctcctttgggtccaagtngatcttg 218
           |||||||||||||||||||| || ||||||  |||||||
Sbjct: 544 tcagtgttgttgcgctccttgggatccaagaagatcttg 506
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>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3,
             complete sequence
          Length = 122868

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 156   gcagagaaggtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
             ||||| || |||||||  |||||||| || ||||| | |||||||||||||||
Sbjct: 46348 gcagaaaacgtctccaatttgtattcggtattgtttctctcctttgggtccaa 46296
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>gb|AC079384.26| Homo sapiens 12 BAC RP11-148B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180555

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   cagcttgtattcagtgttgttgcg 193
             ||||||||||||||||||| ||||
Sbjct: 85208 cagcttgtattcagtgttgctgcg 85185
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>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete
           cds
          Length = 798

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 165 gtctccagcttgtattcagtgttgttgcgctcctttgggtccaa 208
           ||||| |||||||| ||||||||||| | |||||| || |||||
Sbjct: 587 gtctcaagcttgtactcagtgttgttcctctccttaggctccaa 544


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,192,025
Number of Sequences: 3902068
Number of extensions: 1192025
Number of successful extensions: 18253
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18191
Number of HSP's gapped (non-prelim): 58
length of query: 242
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 220
effective length of database: 17,147,199,772
effective search space: 3772383949840
effective search space used: 3772383949840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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