ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189605.2| Oryza sativa (japonica cultivar-group), mRNA 339 6e-90
2dbj|AK102544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 6e-90
3dbj|AK073377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 331 1e-87
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
5dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
6dbj|AK061353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
7ref|XM_776851.1| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.032
8gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 44 0.50
9gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, c... 42 2.0
10gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete s... 40 7.9
11gb|AE006044.1| Pasteurella multocida subsp. multocida str. Pm70 ... 40 7.9
12gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, com... 40 7.9
13gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, com... 40 7.9
14gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome... 40 7.9
15gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, comp... 40 7.9
16gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, co... 40 7.9
17gb|AF098498.1| Caenorhabditis elegans cosmid C04D1, complete seq... 40 7.9
18gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, comp... 40 7.9
19gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, com... 40 7.9
20gb|AC105231.7| Homo sapiens chromosome 15, clone RP11-24F15, com... 40 7.9
21emb|AL442634.13| Human DNA sequence from clone RP11-297L11 on ch... 40 7.9
22emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chr... 40 7.9
23emb|AL138785.8| Human DNA sequence from clone RP4-604A21 on chro... 40 7.9
24emb|AJ131866.1|BNA131866 Brassica napus acc2.1 gene (partial), e... 40 7.9
25emb|BX927098.24| Zebrafish DNA sequence from clone DKEY-228D14 i... 40 7.9
26gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chrom... 40 7.9
27gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.9
28gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, com... 40 7.9
29gb|AC023968.6| Homo sapiens chromosome 15, clone RP11-621H8, com... 40 7.9
30gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromo... 40 7.9
31emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in... 40 7.9
32gb|AC093733.2| Homo sapiens BAC clone RP11-16I17 from 4, complet... 40 7.9
33gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 7.9
34gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromo... 40 7.9
35dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet... 40 7.9
36dbj|AK129366.1| Mus musculus mRNA for mKIAA1460 protein 40 7.9
37gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chrom... 40 7.9
38emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 7.9
39gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chro... 40 7.9
40gb|AC005784.1|AC005784 Homo sapiens chromosome 19, cosmid R30335... 40 7.9
41gb|AC139303.3| Cercopithecus aethiops clone CH252-456L3, complet... 40 7.9
42gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 7.9 
>ref|NM_189605.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1063

 Score =  339 bits (171), Expect = 6e-90
 Identities = 315/363 (86%)
 Strand = Plus / Minus

                                                                       
Query: 216 ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
           |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 781 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 722

                                                                       
Query: 276 acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
            ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 721 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 662

                                                                       
Query: 336 caatgcaacagattcaggtgtgcatttcttcccaccgaacttctgcagaccaacataagt 395
           |||||||||||| |||||||||||| | || ||||| |||||||||||||| ||||||||
Sbjct: 661 caatgcaacagactcaggtgtgcatctttttccaccaaacttctgcagaccgacataagt 602

                                                                       
Query: 396 ccctttgacagcactgttgttatacaccagtattgtaggaacattcctatctgggtagtt 455
           |||||| ||||||||||| || ||||| ||||| ||||| ||||| | ||||||||||||
Sbjct: 601 ccctttaacagcactgttattgtacacaagtatagtagggacatttcgatctgggtagtt 542

                                                                       
Query: 456 gggaatacagtccgtggagataattttaacaaacttggtttctgcatattttgtcgccag 515
           |||||| ||||| || ||||| |||||||||||||| ||| |||  ||| |||| |||| 
Sbjct: 541 gggaatgcagtctgtagagatgattttaacaaacttagttgctgggtatcttgtagccaa 482

                                                                       
Query: 516 ttcctccaggcaagtctcaagcagcccacattctggtatcgcatccttgtagaggaagac 575
           ||| ||||| ||||||| ||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 481 ttcatccagacaagtctgaagcaacccacattctggtattccatccttgtagaggaagac 422

              
Query: 576 cac 578
           |||
Sbjct: 421 cac 419
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>dbj|AK102544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096N05, full
           insert sequence
          Length = 1063

 Score =  339 bits (171), Expect = 6e-90
 Identities = 315/363 (86%)
 Strand = Plus / Minus

                                                                       
Query: 216 ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
           |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 781 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 722

                                                                       
Query: 276 acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
            ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 721 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 662

                                                                       
Query: 336 caatgcaacagattcaggtgtgcatttcttcccaccgaacttctgcagaccaacataagt 395
           |||||||||||| |||||||||||| | || ||||| |||||||||||||| ||||||||
Sbjct: 661 caatgcaacagactcaggtgtgcatctttttccaccaaacttctgcagaccgacataagt 602

                                                                       
Query: 396 ccctttgacagcactgttgttatacaccagtattgtaggaacattcctatctgggtagtt 455
           |||||| ||||||||||| || ||||| ||||| ||||| ||||| | ||||||||||||
Sbjct: 601 ccctttaacagcactgttattgtacacaagtatagtagggacatttcgatctgggtagtt 542

                                                                       
Query: 456 gggaatacagtccgtggagataattttaacaaacttggtttctgcatattttgtcgccag 515
           |||||| ||||| || ||||| |||||||||||||| ||| |||  ||| |||| |||| 
Sbjct: 541 gggaatgcagtctgtagagatgattttaacaaacttagttgctgggtatcttgtagccaa 482

                                                                       
Query: 516 ttcctccaggcaagtctcaagcagcccacattctggtatcgcatccttgtagaggaagac 575
           ||| ||||| ||||||| ||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 481 ttcatccagacaagtctgaagcaacccacattctggtattccatccttgtagaggaagac 422

              
Query: 576 cac 578
           |||
Sbjct: 421 cac 419
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>dbj|AK073377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028G17, full
           insert sequence
          Length = 1070

 Score =  331 bits (167), Expect = 1e-87
 Identities = 314/363 (86%)
 Strand = Plus / Minus

                                                                       
Query: 216 ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
           |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 787 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 728

                                                                       
Query: 276 acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
            ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 727 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 668

                                                                       
Query: 336 caatgcaacagattcaggtgtgcatttcttcccaccgaacttctgcagaccaacataagt 395
           |||||||||||| |||||||||||  | || ||||| |||||||||||||| ||||||||
Sbjct: 667 caatgcaacagactcaggtgtgcacctttttccaccaaacttctgcagaccgacataagt 608

                                                                       
Query: 396 ccctttgacagcactgttgttatacaccagtattgtaggaacattcctatctgggtagtt 455
           |||||| ||||||||||| || ||||| ||||| ||||| ||||| | ||||||||||||
Sbjct: 607 ccctttaacagcactgttattgtacacaagtatagtagggacatttcgatctgggtagtt 548

                                                                       
Query: 456 gggaatacagtccgtggagataattttaacaaacttggtttctgcatattttgtcgccag 515
           |||||| ||||| || ||||| |||||||||||||| ||| |||  ||| |||| |||| 
Sbjct: 547 gggaatgcagtctgtagagatgattttaacaaacttagttgctgggtatcttgtagccaa 488

                                                                       
Query: 516 ttcctccaggcaagtctcaagcagcccacattctggtatcgcatccttgtagaggaagac 575
           ||| ||||| ||||||| ||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 487 ttcatccagacaagtctgaagcaacccacattctggtattccatccttgtagaggaagac 428

              
Query: 576 cac 578
           |||
Sbjct: 427 cac 425
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  186 bits (94), Expect = 5e-44
 Identities = 178/206 (86%)
 Strand = Plus / Plus

                                                                           
Query: 349     tcaggtgtgcatttcttcccaccgaacttctgcagaccaacataagtccctttgacagca 408
               |||||||||||| | || ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 4494540 tcaggtgtgcatctttttccaccaaacttctgcagaccgacataagtccctttaacagca 4494599

                                                                           
Query: 409     ctgttgttatacaccagtattgtaggaacattcctatctgggtagttgggaatacagtcc 468
               ||||| || ||||| ||||| ||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 4494600 ctgttattgtacacaagtatagtagggacatttcgatctgggtagttgggaatgcagtct 4494659

                                                                           
Query: 469     gtggagataattttaacaaacttggtttctgcatattttgtcgccagttcctccaggcaa 528
               || ||||| |||||||||||||| ||| |||  ||| |||| |||| ||| ||||| |||
Sbjct: 4494660 gtagagatgattttaacaaacttagttgctgggtatcttgtagccaattcatccagacaa 4494719

                                         
Query: 529     gtctcaagcagcccacattctggtat 554
               |||| ||||| |||||||||||||||
Sbjct: 4494720 gtctgaagcaacccacattctggtat 4494745



 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                           
Query: 216     ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
               |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 4493898 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 4493957

                                                                           
Query: 276     acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
                ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 4493958 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 4494017

                          
Query: 336     caatgcaacag 346
               |||||||||||
Sbjct: 4494018 caatgcaacag 4494028



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 557     catccttgtagaggaagaccac 578
               ||||||||||||||||||||||
Sbjct: 4495861 catccttgtagaggaagaccac 4495882
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>dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510F03
          Length = 149699

 Score =  186 bits (94), Expect = 5e-44
 Identities = 178/206 (86%)
 Strand = Plus / Plus

                                                                         
Query: 349   tcaggtgtgcatttcttcccaccgaacttctgcagaccaacataagtccctttgacagca 408
             |||||||||||| | || ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 29227 tcaggtgtgcatctttttccaccaaacttctgcagaccgacataagtccctttaacagca 29286

                                                                         
Query: 409   ctgttgttatacaccagtattgtaggaacattcctatctgggtagttgggaatacagtcc 468
             ||||| || ||||| ||||| ||||| ||||| | |||||||||||||||||| ||||| 
Sbjct: 29287 ctgttattgtacacaagtatagtagggacatttcgatctgggtagttgggaatgcagtct 29346

                                                                         
Query: 469   gtggagataattttaacaaacttggtttctgcatattttgtcgccagttcctccaggcaa 528
             || ||||| |||||||||||||| ||| |||  ||| |||| |||| ||| ||||| |||
Sbjct: 29347 gtagagatgattttaacaaacttagttgctgggtatcttgtagccaattcatccagacaa 29406

                                       
Query: 529   gtctcaagcagcccacattctggtat 554
             |||| ||||| |||||||||||||||
Sbjct: 29407 gtctgaagcaacccacattctggtat 29432



 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 216   ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
             |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 28585 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 28644

                                                                         
Query: 276   acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
              ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 28645 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 28704

                        
Query: 336   caatgcaacag 346
             |||||||||||
Sbjct: 28705 caatgcaacag 28715



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 557   catccttgtagaggaagaccac 578
             ||||||||||||||||||||||
Sbjct: 30548 catccttgtagaggaagaccac 30569
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>dbj|AK061353.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G06, full
            insert sequence
          Length = 1284

 Score =  125 bits (63), Expect = 2e-25
 Identities = 114/131 (87%)
 Strand = Plus / Plus

                                                                        
Query: 216  ttcaagctgggagacaaccttttctatgaacttcctgcgaacgccttccatgacattgtt 275
            |||| |||||| |||||||||||| ||||||||||||||||||||||| |||||||||| 
Sbjct: 1037 ttcatgctgggcgacaaccttttcgatgaacttcctgcgaacgccttctatgacattgtc 1096

                                                                        
Query: 276  acgggatgaatctccaccaccttgtccatcattcagtacagggtctgagtggcaaagcgc 335
             ||||||||||| || || |  || ||||||||||| || || ||||| |||||||| ||
Sbjct: 1097 ccgggatgaatcaccgccgctctgcccatcattcaggactggctctgactggcaaagggc 1156

                       
Query: 336  caatgcaacag 346
            |||||||||||
Sbjct: 1157 caatgcaacag 1167
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>ref|XM_776851.1| PREDICTED: Strongylocentrotus purpuratus similar to Ran
           GTPase-activating protein 1 (LOC576552), mRNA
          Length = 1170

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 341 caacagattcaggtgtgcatttct 364
           ||||||||||||||||||||||||
Sbjct: 943 caacagattcaggtgtgcatttct 920
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 86    cacagacaaccaaataagatca 107
             ||||||||||||||||||||||
Sbjct: 43694 cacagacaaccaaataagatca 43673
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>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence
          Length = 224129

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   ccaaaacaaaactagcagaaa 176
             |||||||||||||||||||||
Sbjct: 37927 ccaaaacaaaactagcagaaa 37907
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>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence
          Length = 172417

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    acttggtttctgcatatttt 507
              ||||||||||||||||||||
Sbjct: 116869 acttggtttctgcatatttt 116850
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>gb|AE006044.1| Pasteurella multocida subsp. multocida str. Pm70 section 11 of 204 of
            the complete genome
          Length = 11317

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 495  ttctgcatattttgtcgcca 514
            ||||||||||||||||||||
Sbjct: 6706 ttctgcatattttgtcgcca 6687
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>gb|AC147120.2| Pan troglodytes BAC clone CH251-531L7 from Y, complete sequence
          Length = 175034

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    acacagacaaccaaataagatcaggaaa 112
             ||||||||||| |||||| |||||||||
Sbjct: 34967 acacagacaacgaaataaaatcaggaaa 34994
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>gb|AC147668.2| Pan troglodytes BAC clone CH251-120D9 from Y, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 85     acacagacaaccaaataagatcaggaaa 112
              ||||||||||| |||||| |||||||||
Sbjct: 168082 acacagacaacgaaataaaatcaggaaa 168109
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>gb|AC121850.3| Mus musculus BAC clone RP24-92E18 from chromosome 3, complete sequence
          Length = 195731

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    acagccttcaagatttttcacaca 87
             |||||||||||||||| |||||||
Sbjct: 70844 acagccttcaagatttctcacaca 70821
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>gb|AC147164.2| Pan troglodytes BAC clone CH251-1H10 from Y, complete sequence
          Length = 188603

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 85    acacagacaaccaaataagatcaggaaa 112
             ||||||||||| |||||| |||||||||
Sbjct: 29863 acacagacaacgaaataaaatcaggaaa 29836
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>gb|AC147139.2| Pan troglodytes BAC clone CH251-327B12 from Y, complete sequence
          Length = 165128

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 85     acacagacaaccaaataagatcaggaaa 112
              ||||||||||| |||||| |||||||||
Sbjct: 130467 acacagacaacgaaataaaatcaggaaa 130494
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>gb|AF098498.1| Caenorhabditis elegans cosmid C04D1, complete sequence
          Length = 11579

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   aaccaaataagatcaggaaa 112
            ||||||||||||||||||||
Sbjct: 6809 aaccaaataagatcaggaaa 6790
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>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence
          Length = 212954

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 85     acacagacaaccaaataagatcaggaaa 112
              ||||||||||| |||||| |||||||||
Sbjct: 200433 acacagacaacgaaataaaatcaggaaa 200460
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>gb|AC138364.8| Mus musculus chromosome 7, clone RP23-243D10, complete sequence
          Length = 199717

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    tacagggtctgagtggcaaa 331
              ||||||||||||||||||||
Sbjct: 153397 tacagggtctgagtggcaaa 153378
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>gb|AC105231.7| Homo sapiens chromosome 15, clone RP11-24F15, complete sequence
          Length = 145168

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   taagatcaggaaagccaaga 119
             ||||||||||||||||||||
Sbjct: 12589 taagatcaggaaagccaaga 12570
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>emb|AL442634.13| Human DNA sequence from clone RP11-297L11 on chromosome 9 Contains part
             of a novel gene (LOC158135), complete sequence
          Length = 57943

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    agatttttcacacacagaca 93
             ||||||||||||||||||||
Sbjct: 51436 agatttttcacacacagaca 51455
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>emb|AL354868.10| Human DNA sequence from clone RP11-339A7 on chromosome 6 Contains a
              ribosomal protein L21 (RPL21) pseudogene, complete sequence
          Length = 164018

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    caaaacaaaactagcagaaa 176
              ||||||||||||||||||||
Sbjct: 144795 caaaacaaaactagcagaaa 144814
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>emb|AL138785.8| Human DNA sequence from clone RP4-604A21 on chromosome 1 Contains part
             of the EPB41 gene for erythrocyte membrane protein band
             4.1 (elliptocytosis 1, RH-linked) and a ribosomal protein
             L27 (RPL27) pseudogene, complete sequence
          Length = 109609

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    acattaccacaggcaagtta 31
             ||||||||||||||||||||
Sbjct: 72077 acattaccacaggcaagtta 72058
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>emb|AJ131866.1|BNA131866 Brassica napus acc2.1 gene (partial), exons 1-30
          Length = 12069

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 192  gctgtcatcttcttcttctc 211
            ||||||||||||||||||||
Sbjct: 3887 gctgtcatcttcttcttctc 3906
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>emb|BX927098.24| Zebrafish DNA sequence from clone DKEY-228D14 in linkage group 13,
             complete sequence
          Length = 229413

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 487   aacttggtttctgcatattttgtc 510
             |||||| |||||||||||||||||
Sbjct: 56650 aacttgatttctgcatattttgtc 56627
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>gb|AC147115.4| Pan troglodytes BAC clone CH251-550P11 from chromosome y, complete
             sequence
          Length = 200911

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 85    acacagacaaccaaataagatcaggaaa 112
             ||||||||||| |||||| |||||||||
Sbjct: 12529 acacagacaacgaaataaaatcaggaaa 12502
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 85       acacagacaaccaaataagatcaggaaa 112
                ||||||||||| |||||| |||||||||
Sbjct: 12554044 acacagacaacgaaataaaatcaggaaa 12554071



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 85       acacagacaaccaaataagatcaggaaa 112
                ||||||||||| |||||| |||||||||
Sbjct: 11860739 acacagacaacgaaataaaatcaggaaa 11860712



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 85      acacagacaaccaaataagatcaggaaa 112
               ||||||||||| |||||| |||||||||
Sbjct: 2360452 acacagacaacgaaataaaatcaggaaa 2360479



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 85      acacagacaaccaaataagatcaggaaa 112
               ||||||||||| |||||| |||||||||
Sbjct: 1688836 acacagacaacgaaataaaatcaggaaa 1688809
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>gb|AC008731.8| Homo sapiens chromosome 16 clone CTD-2515A14, complete sequence
          Length = 219013

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    tacagggtctgagtggcaaa 331
              ||||||||||||||||||||
Sbjct: 141771 tacagggtctgagtggcaaa 141752
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>gb|AC023968.6| Homo sapiens chromosome 15, clone RP11-621H8, complete sequence
          Length = 173586

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    taagatcaggaaagccaaga 119
              ||||||||||||||||||||
Sbjct: 163466 taagatcaggaaagccaaga 163447
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>gb|AC160938.2| Pan troglodytes BAC clone CH251-901A9 from chromosome y, complete
             sequence
          Length = 212330

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    acacagacaaccaaataagatcaggaaa 112
             ||||||||||| |||||| |||||||||
Sbjct: 75471 acacagacaacgaaataaaatcaggaaa 75498
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>emb|BX510912.4| Zebrafish DNA sequence from clone CH211-18J22 in linkage group 3,
             complete sequence
          Length = 189210

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 487   aacttggtttctgcatattttgtc 510
             |||||| |||||||||||||||||
Sbjct: 54803 aacttgatttctgcatattttgtc 54826
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>gb|AC093733.2| Homo sapiens BAC clone RP11-16I17 from 4, complete sequence
          Length = 175509

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   gatccaaatgatatcactta 154
             ||||||||||||||||||||
Sbjct: 75524 gatccaaatgatatcactta 75543
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 477     aattttaacaaacttggtttctgcatattttg 508
               ||||||| |||||||  |||||||||||||||
Sbjct: 1137507 aattttatcaaactttttttctgcatattttg 1137476
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>gb|AC147683.3| Pan troglodytes BAC clone CH251-430O9 from chromosome y, complete
              sequence
          Length = 176384

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 85     acacagacaaccaaataagatcaggaaa 112
              ||||||||||| |||||| |||||||||
Sbjct: 141698 acacagacaacgaaataaaatcaggaaa 141725
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>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   aattttaacaaacttggttt 496
             ||||||||||||||||||||
Sbjct: 11459 aattttaacaaacttggttt 11440
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>dbj|AK129366.1| Mus musculus mRNA for mKIAA1460 protein
          Length = 4311

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 312  tacagggtctgagtggcaaa 331
            ||||||||||||||||||||
Sbjct: 4034 tacagggtctgagtggcaaa 4053
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>gb|AC161006.2| Pan troglodytes BAC clone CH251-842O13 from chromosome y, complete
              sequence
          Length = 201209

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 85     acacagacaaccaaataagatcaggaaa 112
              ||||||||||| |||||| |||||||||
Sbjct: 139387 acacagacaacgaaataaaatcaggaaa 139360
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   agcagaaagagtaagtttta 188
             ||||||||||||||||||||
Sbjct: 92706 agcagaaagagtaagtttta 92725
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>gb|AC163729.5| Pan troglodytes BAC clone CH251-1018P19 from chromosome y, complete
             sequence
          Length = 196073

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 85    acacagacaaccaaataagatcaggaaa 112
             ||||||||||| |||||| |||||||||
Sbjct: 11795 acacagacaacgaaataaaatcaggaaa 11822
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>gb|AC005784.1|AC005784 Homo sapiens chromosome 19, cosmid R30335, complete sequence
          Length = 43320

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 154  aaccaaaacaaaactagcagaaag 177
            ||||||||||||||||| ||||||
Sbjct: 2193 aaccaaaacaaaactagaagaaag 2216
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>gb|AC139303.3| Cercopithecus aethiops clone CH252-456L3, complete sequence
          Length = 179499

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 477    aattttaacaaacttggtttctgcatattttg 508
              ||||||| |||||||  |||||||||||||||
Sbjct: 126555 aattttatcaaactttttttctgcatattttg 126524
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>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 488    acttggtttctgcatatttt 507
              ||||||||||||||||||||
Sbjct: 116869 acttggtttctgcatatttt 116850


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,977,233
Number of Sequences: 3902068
Number of extensions: 6977233
Number of successful extensions: 130243
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130013
Number of HSP's gapped (non-prelim): 230
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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