>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence
          Length = 215113

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 241    gagggaggccgaggagaggaagatg 265
              |||||||| ||||||||||||||||
Sbjct: 178263 gagggaggtcgaggagaggaagatg 178239

>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence
          Length = 199727

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   agggaggccgaggagaggaagatg 265
             ||||||||||||| ||||||||||
Sbjct: 22277 agggaggccgaggggaggaagatg 22300

>ref|XM_479396.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1073

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 224 aggttatgcaggatgtagagggaggccgaggagaggaagatgca 267
           ||||| ||||||||||| ||||| ||||| || | |||||||||
Sbjct: 843 aggttgtgcaggatgtacagggaagccgacgacaagaagatgca 800

>ref|XM_603414.2| PREDICTED: Bos taurus similar to mitochondrial protein 18 kDa
           isoform a (LOC525071), mRNA
          Length = 1123

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 caggatgtagagggaggccg 251
           ||||||||||||||||||||
Sbjct: 420 caggatgtagagggaggccg 401

>ref|XM_955005.1| Neurospora crassa OR74A hypothetical protein (NCU05838.1) partial
            mRNA
          Length = 1254

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ggaggccgaggagaggaaga 263
            ||||||||||||||||||||
Sbjct: 993  ggaggccgaggagaggaaga 1012

>ref|XM_325692.1| Neurospora crassa OR74A hypothetical protein (NCU05838.1) partial
            mRNA
          Length = 1254

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ggaggccgaggagaggaaga 263
            ||||||||||||||||||||
Sbjct: 993  ggaggccgaggagaggaaga 1012

>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ctcctcgtgctcgggccggt 221
             ||||||||||||||||||||
Sbjct: 66240 ctcctcgtgctcgggccggt 66259

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 50      aaccggtcgaccaccgcgca 69
               ||||||||||||||||||||
Sbjct: 2393304 aaccggtcgaccaccgcgca 2393323

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 224      aggttatgcaggatgtagagggaggccgaggagaggaagatgca 267
                ||||| ||||||||||| ||||| ||||| || | |||||||||
Sbjct: 27576141 aggttgtgcaggatgtacagggaagccgacgacaagaagatgca 27576098

>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 224   aggttatgcaggatgtagagggaggccgaggagaggaagatgca 267
             ||||| ||||||||||| ||||| ||||| || | |||||||||
Sbjct: 33134 aggttgtgcaggatgtacagggaagccgacgacaagaagatgca 33091

>dbj|AP005182.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0018C07
          Length = 141707

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 224    aggttatgcaggatgtagagggaggccgaggagaggaagatgca 267
              ||||| ||||||||||| ||||| ||||| || | |||||||||
Sbjct: 140112 aggttgtgcaggatgtacagggaagccgacgacaagaagatgca 140069

>gb|BT024054.1| Zea mays clone EL01N0439D05 mRNA sequence
          Length = 1966

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  ggaggccgaggagaggaaga 263
            ||||||||||||||||||||
Sbjct: 1307 ggaggccgaggagaggaaga 1326

>dbj|AK060061.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F12, full
           insert sequence
          Length = 1073

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 224 aggttatgcaggatgtagagggaggccgaggagaggaagatgca 267
           ||||| ||||||||||| ||||| ||||| || | |||||||||
Sbjct: 843 aggttgtgcaggatgtacagggaagccgacgacaagaagatgca 800

>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    agggaggccgaggagaggaagatg 265
              ||||||||||||| ||||||||||
Sbjct: 101457 agggaggccgaggggaggaagatg 101434

>emb|AL606902.26| Mouse DNA sequence from clone RP23-167A12 on chromosome 4, complete
            sequence
          Length = 100421

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  atgcaggatgtagagggagg 248
            ||||||||||||||||||||
Sbjct: 7833 atgcaggatgtagagggagg 7814


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,736,871
Number of Sequences: 3902068
Number of extensions: 1736871
Number of successful extensions: 32806
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32736
Number of HSP's gapped (non-prelim): 70
length of query: 267
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 245
effective length of database: 17,147,199,772
effective search space: 4201063944140
effective search space used: 4201063944140
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)