ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7n17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099798.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097M20, full insert sequence Length = 1962 Score = 412 bits (208), Expect = e-112 Identities = 412/480 (85%) Strand = Plus / Minus Query: 145 catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 204 |||||||| || | |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 1700 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 1641 Query: 205 ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 264 |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| || Sbjct: 1640 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 1581 Query: 265 aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 324 ||||||||| || || |||||||| || || ||||| || ||||| || || || ||||| Sbjct: 1580 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 1521 Query: 325 catgaggtttgaaaggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggc 384 ||||| |||||| |||||||| | |||||||||||| | || ||||| ||||||||||| Sbjct: 1520 catgatgtttgagaggaatgaaagaaccatggcagcaattagaggaggagtgcccaaggc 1461 Query: 385 acttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaa 444 || | ||| |||| || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 1460 gctggacactgacaaaaatgcagtgaacattgctccaatgtgcgctgcgccactggcaaa 1401 Query: 445 gaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggacag 504 ||| ||||||||||||||||||| ||||||||| ||||| || || |||||||| || || Sbjct: 1400 gaaatagtgggagtagaagtacagcagcaccaagacaccaaacgatagttgccatgagag 1341 Query: 505 accgagacctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatattt 564 ||| || || ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| Sbjct: 1340 accaaggccaccaacaaacttcacaacagtctcactgaaccaagagatcaacccgtattt 1281 Query: 565 gttgaggtagccagccatcgcaatcagcgcagcaaaccaagtaagggtatcccatgctac 624 ||||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 1280 gttgaggtatccagccattgcaataagagcagcaaaccatgtaagggtatcccacgctac 1221 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggtacaaactaaaagaatgg 52 |||||||||||||||||||| Sbjct: 1833 ggtacaaactaaaagaatgg 1814
>dbj|AK061957.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F09, full insert sequence Length = 1506 Score = 412 bits (208), Expect = e-112 Identities = 412/480 (85%) Strand = Plus / Minus Query: 145 catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 204 |||||||| || | |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 1308 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 1249 Query: 205 ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 264 |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| || Sbjct: 1248 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 1189 Query: 265 aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 324 ||||||||| || || |||||||| || || ||||| || ||||| || || || ||||| Sbjct: 1188 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 1129 Query: 325 catgaggtttgaaaggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggc 384 ||||| |||||| |||||||| | |||||||||||| | || ||||| ||||||||||| Sbjct: 1128 catgatgtttgagaggaatgaaagaaccatggcagcaattagaggaggagtgcccaaggc 1069 Query: 385 acttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaa 444 || | ||| |||| || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 1068 gctggacactgacaaaaatgcagtgaacattgctccaatgtgcgctgcgccactggcaaa 1009 Query: 445 gaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggacag 504 ||| ||||||||||||||||||| ||||||||| ||||| || || |||||||| || || Sbjct: 1008 gaaatagtgggagtagaagtacagcagcaccaagacaccaaacgatagttgccatgagag 949 Query: 505 accgagacctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatattt 564 ||| || || ||||||||||| ||||||||||| ||||||||||| ||||| || ||||| Sbjct: 948 accaaggccaccaacaaacttcacaacagtctcactgaaccaagagatcaacccgtattt 889 Query: 565 gttgaggtagccagccatcgcaatcagcgcagcaaaccaagtaagggtatcccatgctac 624 ||||||||| |||||||| ||||| || ||||||||||| |||||||||||||| ||||| Sbjct: 888 gttgaggtatccagccattgcaataagagcagcaaaccatgtaagggtatcccacgctac 829 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggtacaaactaaaagaatgg 52 |||||||||||||||||||| Sbjct: 1441 ggtacaaactaaaagaatgg 1422
>gb|AY106468.1| Zea mays PCO103506 mRNA sequence Length = 845 Score = 389 bits (196), Expect = e-105 Identities = 394/460 (85%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 ||||||||| || || ||||||||||||||||| || | || |||||||||||||||| Sbjct: 581 ctcaccacagcccgattatcttccaccagaagccgcccaccccgagccagatgatgatgt 522 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | ||||||||||||||||| |||||||||||||||| ||||| || ||||| || || | Sbjct: 521 ttacaacggagatgacaaacccatagccccaccactgagccaatgggacatacccggcgc 462 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||||||| || || || ||||| || ||||| || ||||||||||| || | Sbjct: 461 cgtagaagacgggagcagagccgatgccgtagtgggtggtcccgcccatgaggttcgaga 402 Query: 339 ggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggcacttgccacagaca 398 ||||||| | |||||||||||||||||||| |||||||||| |||||| ||||| |||| Sbjct: 401 ggaatgaaagaaccatggcagcgaaaagcgacggggtgcccagggcactcgccaccgaca 342 Query: 399 ggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagt 458 ||||||| |||||||| |||||||||||||| |||||||| |||||||| ||||| |||| Sbjct: 341 ggaacgcggtgaacattgctccgatgtgtgcggcaccactggcaaagaaatagtgcgagt 282 Query: 459 agaagtacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaa 518 ||||||||| |||||||| |||||||||||||||||||| |||| || || ||||||| Sbjct: 281 agaagtacagcagcaccagcacaccgaatgagagttgccatgacatgccaagccctccaa 222 Query: 519 caaacttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccag 578 ||||||| ||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 221 caaacttcacaacagtctcactgaaccaagagatcagcccgaatttgttgaggtagccag 162 Query: 579 ccatcgcaatcagcgcagcaaaccaagtaagggtatccca 618 |||| || || || || |||||||| |||||||||||||| Sbjct: 161 ccattgctataagtgctgcaaaccatgtaagggtatccca 122
>dbj|AB112936.1| Zea mays ZmpOMT1 mRNA for plastidic 2-oxoglutarate/malate transporter, complete cds Length = 1907 Score = 381 bits (192), Expect = e-102 Identities = 393/460 (85%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 ||||||||| || || ||||||||||||||||| || | || |||||||||||||||| Sbjct: 1760 ctcaccacagcccgattatcttccaccagaagccgcccaccccgagccagatgatgatgt 1701 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | ||||||||||||||||| |||||||||||||||| ||||| || ||||| || || | Sbjct: 1700 ttacaacggagatgacaaacccatagccccaccactgagccaatgggacatacccggcgc 1641 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||||||| || || || ||||| || ||||| || ||||||||||| || | Sbjct: 1640 cgtagaagacgggagcagagccgatgccgtagtgggtggtcccgcccatgaggttcgaga 1581 Query: 339 ggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggcacttgccacagaca 398 ||||||| | ||||||||||||||| |||| |||||||||| |||||| ||||| |||| Sbjct: 1580 ggaatgaaagaaccatggcagcgaagagcgacggggtgcccagggcactcgccaccgaca 1521 Query: 399 ggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagt 458 ||||||| |||||||| |||||||||||||| |||||||| || ||||| ||||| |||| Sbjct: 1520 ggaacgcggtgaacattgctccgatgtgtgcggcaccactggcgaagaaatagtgcgagt 1461 Query: 459 agaagtacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaa 518 ||||||||| ||||||||| |||||||||||||||||||| |||| || || ||||||| Sbjct: 1460 agaagtacagcagcaccaagacaccgaatgagagttgccatgacatgccaagccctccaa 1401 Query: 519 caaacttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccag 578 ||||||| ||||||||||| ||||||||||| |||| || |||||||||||||||||| Sbjct: 1400 caaacttcacaacagtctcactgaaccaagagatcagcccgaatttgttgaggtagccag 1341 Query: 579 ccatcgcaatcagcgcagcaaaccaagtaagggtatccca 618 |||| || || || || |||||||| |||||||||||||| Sbjct: 1340 ccattgctataagtgctgcaaaccatgtaagggtatccca 1301
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 301 bits (152), Expect = 1e-78 Identities = 323/380 (85%) Strand = Plus / Minus Query: 145 catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 204 |||||||| || | |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 20049373 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 20049314 Query: 205 ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 264 |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| || Sbjct: 20049313 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 20049254 Query: 265 aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 324 ||||||||| || || |||||||| || || ||||| || ||||| || || || ||||| Sbjct: 20049253 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 20049194 Query: 325 catgaggtttgaaaggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggc 384 ||||| |||||| |||||||| | |||||||||||| | || ||||| ||||||||||| Sbjct: 20049193 catgatgtttgagaggaatgaaagaaccatggcagcaattagaggaggagtgcccaaggc 20049134 Query: 385 acttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaa 444 || | ||| |||| || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 20049133 gctggacactgacaaaaatgcagtgaacattgctccaatgtgcgctgcgccactggcaaa 20049074 Query: 445 gaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggacag 504 ||| ||||||||||||||||||| ||||||||| ||||| || || |||||||| || || Sbjct: 20049073 gaaatagtgggagtagaagtacagcagcaccaagacaccaaacgatagttgccatgagag 20049014 Query: 505 accgagacctccaacaaact 524 ||| || || |||||||||| Sbjct: 20049013 accaaggccaccaacaaact 20048994 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 527 acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatcgca 586 ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| ||| Sbjct: 20048386 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccattgca 20048327 Query: 587 atcagcgcagcaaaccaagtaagggtatcccatgctac 624 || || ||||||||||| |||||||||||||| ||||| Sbjct: 20048326 ataagagcagcaaaccatgtaagggtatcccacgctac 20048289 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggtacaaactaaaagaatgg 52 |||||||||||||||||||| Sbjct: 20049506 ggtacaaactaaaagaatgg 20049487
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 301 bits (152), Expect = 1e-78 Identities = 323/380 (85%) Strand = Plus / Minus Query: 145 catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 204 |||||||| || | |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 19975587 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 19975528 Query: 205 ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 264 |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| || Sbjct: 19975527 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 19975468 Query: 265 aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 324 ||||||||| || || |||||||| || || ||||| || ||||| || || || ||||| Sbjct: 19975467 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 19975408 Query: 325 catgaggtttgaaaggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggc 384 ||||| |||||| |||||||| | |||||||||||| | || ||||| ||||||||||| Sbjct: 19975407 catgatgtttgagaggaatgaaagaaccatggcagcaattagaggaggagtgcccaaggc 19975348 Query: 385 acttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaa 444 || | ||| |||| || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 19975347 gctggacactgacaaaaatgcagtgaacattgctccaatgtgcgctgcgccactggcaaa 19975288 Query: 445 gaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggacag 504 ||| ||||||||||||||||||| ||||||||| ||||| || || |||||||| || || Sbjct: 19975287 gaaatagtgggagtagaagtacagcagcaccaagacaccaaacgatagttgccatgagag 19975228 Query: 505 accgagacctccaacaaact 524 ||| || || |||||||||| Sbjct: 19975227 accaaggccaccaacaaact 19975208 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 527 acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatcgca 586 ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| ||| Sbjct: 19974600 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccattgca 19974541 Query: 587 atcagcgcagcaaaccaagtaagggtatcccatgctac 624 || || ||||||||||| |||||||||||||| ||||| Sbjct: 19974540 ataagagcagcaaaccatgtaagggtatcccacgctac 19974503 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggtacaaactaaaagaatgg 52 |||||||||||||||||||| Sbjct: 19975720 ggtacaaactaaaagaatgg 19975701
>emb|AL713900.4|CNS07YQ0 Oryza sativa chromosome 12, . BAC OJ1126_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 99791 Score = 301 bits (152), Expect = 1e-78 Identities = 323/380 (85%) Strand = Plus / Minus Query: 145 catttactgtgtttctcaccacaaaccaatcatcttccaccagaagcctccagcaccaag 204 |||||||| || | |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 29535 catttactttgctcctcaccacaagccgagcatcttccaccagaagcctccagcaccaag 29476 Query: 205 ccagatgatgatgttaacaacggagatgacaaatccatagccccaccactcagccagcgg 264 |||||||||||||||||| | ||| |||||||||||||| |||||||||| |||||| || Sbjct: 29475 ccagatgatgatgttaacgatggaaatgacaaatccatacccccaccactgagccagtgg 29416 Query: 265 aacatagcccgctccatagaagacgggggctgaccctatgccataatgggtcaggccacc 324 ||||||||| || || |||||||| || || ||||| || ||||| || || || ||||| Sbjct: 29415 aacatagccagcaccgtagaagacaggagcagacccaattccatagtgcgtgagtccacc 29356 Query: 325 catgaggtttgaaaggaatgacataaccatggcagcgaaaagcggaggggtgcccaaggc 384 ||||| |||||| |||||||| | |||||||||||| | || ||||| ||||||||||| Sbjct: 29355 catgatgtttgagaggaatgaaagaaccatggcagcaattagaggaggagtgcccaaggc 29296 Query: 385 acttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagcaaa 444 || | ||| |||| || ||||||||||| ||||| ||||| || || ||||| ||||| Sbjct: 29295 gctggacactgacaaaaatgcagtgaacattgctccaatgtgcgctgcgccactggcaaa 29236 Query: 445 gaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggacag 504 ||| ||||||||||||||||||| ||||||||| ||||| || || |||||||| || || Sbjct: 29235 gaaatagtgggagtagaagtacagcagcaccaagacaccaaacgatagttgccatgagag 29176 Query: 505 accgagacctccaacaaact 524 ||| || || |||||||||| Sbjct: 29175 accaaggccaccaacaaact 29156 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 527 acaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatcgca 586 ||||||||||| ||||||||||| ||||| || |||||||||||||| |||||||| ||| Sbjct: 28548 acaacagtctcactgaaccaagagatcaacccgtatttgttgaggtatccagccattgca 28489 Query: 587 atcagcgcagcaaaccaagtaagggtatcccatgctac 624 || || ||||||||||| |||||||||||||| ||||| Sbjct: 28488 ataagagcagcaaaccatgtaagggtatcccacgctac 28451 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggtacaaactaaaagaatgg 52 |||||||||||||||||||| Sbjct: 29668 ggtacaaactaaaagaatgg 29649
>dbj|AB190775.1| Mesembryanthemum crystallinum DCT1 mRNA for putative plastidic 2-oxoglutarate/malate translocator, partial cds Length = 1719 Score = 119 bits (60), Expect = 1e-23 Identities = 192/236 (81%) Strand = Plus / Minus Query: 383 gcacttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagca 442 |||||||| || || ||||| || |||||||| || || || |||||||| || || || Sbjct: 1058 gcacttgcaactgaaaggaaggctgtgaacatggcaccaatatgtgcagctccgcttgcg 999 Query: 443 aagaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggac 502 ||||||||||||||||||||||| | || || | | ||||||||| |||||||| || Sbjct: 998 aagaagtagtgggagtagaagtaaaggagaacaaggataccgaatgatagttgccatgaa 939 Query: 503 agaccgagacctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatat 562 || || | ||| ||||||||||||||||| || || |||||||| | ||| | ||||| Sbjct: 938 agtcctaaaccaccaacaaacttaacaacggtttcactgaaccaggcaatgagaccatac 879 Query: 563 ttgttgaggtagccagccatcgcaatcagcgcagcaaaccaagtaagggtatccca 618 |||||||| || |||||||| ||||| || ||||||||||| || ||||||||||| Sbjct: 878 ttgttgagatacccagccatggcaattagagcagcaaaccatgtcagggtatccca 823 Score = 46.1 bits (23), Expect = 0.14 Identities = 56/67 (83%) Strand = Plus / Minus Query: 278 ccatagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaa 337 |||||||| || |||||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 1163 ccatagaaaactggggctgaaccaataccgtagtgggtaaggccgcccatgaggttggac 1104 Query: 338 aggaatg 344 ||||||| Sbjct: 1103 aggaatg 1097
>gb|U13238.1|SOU13238 Spinacia oleracea envelope membrane 2-oxoglutarate/malate translocator (SODiT1) mRNA, chloroplast mRNA encoding chloroplast protein, complete cds Length = 1934 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Minus Query: 383 gcacttgccacagacaggaacgcagtgaacatcgctccgatgtgtgcagcaccactagca 442 |||||||| || || ||||| || |||||||| || || || |||||||| ||||||||| Sbjct: 1500 gcacttgcaactgaaaggaaggctgtgaacatggcaccaatatgtgcagctccactagca 1441 Query: 443 aagaagtagtgggagtagaagtacatcagcaccaatacaccgaatgagagttgccaggac 502 ||||||||||| ||||||||||| | || || | || |||||||| | ||||| || Sbjct: 1440 aagaagtagtgagagtagaagtaaagaagaactagaacgccgaatgacatctgccatgaa 1381 Query: 503 agaccgagacctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatat 562 ||||| | ||| ||||||| |||||| ||| | || |||||||| | ||| | || || Sbjct: 1380 agacctaaaccaccaacaaccttaaccacattttcactgaaccaggtaatgagaccgtac 1321 Query: 563 ttgttgaggtagccagccatcgcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 |||||||| || |||||||| ||||| || ||||||||||| || |||||||||||||| Sbjct: 1320 ttgttgagataaccagccatggcaatgagtgcagcaaaccatgtgagggtatcccatgc 1262
>emb|BX830891.1|CNS0A0U0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1880 Score = 71.9 bits (36), Expect = 2e-09 Identities = 147/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 1696 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1637 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | ||||| | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 1636 tgactattgagatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1577 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 1576 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 1517 Query: 339 ggaa 342 |||| Sbjct: 1516 ggaa 1513 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 422 atgtgtgcagcaccactagcaaagaagtagtgggagtagaagtaca 467 ||||| ||||| |||||||||||||||||||| | |||||| |||| Sbjct: 1432 atgtgggcagctccactagcaaagaagtagtgagtgtagaaataca 1387 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 557 ccatatttgttgaggtagccagccatcgcaatcagcgcagcaaacca 603 ||||||||||| || || |||||||||||||| || ||||| ||||| Sbjct: 1297 ccatatttgttaagataaccagccatcgcaatgagagcagcgaacca 1251
>ref|NM_121289.3| Arabidopsis thaliana oxoglutarate:malate antiporter AT5G12860 mRNA, complete cds Length = 1946 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 1461 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1402 Query: 464 tacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaacaaac 523 |||| || || | | || || || || ||||| |||| ||| | ||||| |||||| Sbjct: 1401 tacaagaggacgaggattccaaaagatagctgccatgacaaacccaatcctcccacaaac 1342 Query: 524 ttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatc 583 || || || |||| ||||||||| ||| | ||||||||||| || || ||||||||| Sbjct: 1341 ttgactacggtctggctgaaccactcaatgagaccatatttgttaagataaccagccatc 1282 Query: 584 gcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 ||||| || ||||| ||||| || || || |||||||| Sbjct: 1281 gcaatgagagcagcgaaccaggtgagtgtgtcccatgc 1244 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 1706 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1647 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 1646 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1587 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 1586 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 1527 Query: 339 ggaa 342 |||| Sbjct: 1526 ggaa 1523
>gb|AF370494.1|AF370494 Arabidopsis thaliana 2-oxoglutarate/malate translocator precursor-like protein (T24H18.30) mRNA, complete cds Length = 1827 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 1383 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1324 Query: 464 tacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaacaaac 523 |||| || || | | || || || || ||||| |||| ||| | ||||| |||||| Sbjct: 1323 tacaagaggacgaggattccaaaagatagctgccatgacaaacccaatcctcccacaaac 1264 Query: 524 ttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatc 583 || || || |||| ||||||||| ||| | ||||||||||| || || ||||||||| Sbjct: 1263 ttgactacggtctggctgaaccactcaatgagaccatatttgttaagataaccagccatc 1204 Query: 584 gcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 ||||| || ||||| ||||| || || || |||||||| Sbjct: 1203 gcaatgagagcagcgaaccaggtgagtgtgtcccatgc 1166 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 1628 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1569 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 1568 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1509 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 1508 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 1449 Query: 339 ggaa 342 |||| Sbjct: 1448 ggaa 1445
>emb|BX831893.1|CNS0A11L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1842 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 1499 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1440 Query: 464 tacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaacaaac 523 |||| || || | | || || || || ||||| |||| ||| | ||||| |||||| Sbjct: 1439 tacaagaggacgaggattccaaaagatagctgccatgacaaacccaatcctcccacaaac 1380 Query: 524 ttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatc 583 || || || |||| ||||||||| ||| | ||||||||||| || || ||||||||| Sbjct: 1379 ttgactacggtctggctgaaccactcaatgagaccatatttgttaagataaccagccatc 1320 Query: 584 gcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 ||||| || ||||| ||||| || || || |||||||| Sbjct: 1319 gcaatgagagcagcgaaccaggtgagtgtgtcccatgc 1282 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 236 aatccatagccccaccactcagccagcggaacatagcccgctccatagaagacgggggct 295 ||||||||||||||||| | ||||||||| || ||| ||||| ||||||| || || Sbjct: 1669 aatccatagccccaccatttagccagcggcacgtagttagctccgtagaagataggcgca 1610 Query: 296 gaccctatgccataatgggtcaggccacccatgaggtttgaaaggaa 342 ||||| || ||||||||||||| || ||||| ||||| |||||||| Sbjct: 1609 gacccgataccataatgggtcaatcctcccatcaggttggaaaggaa 1563
>emb|BX831583.1|CNS0A162 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1841 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 1442 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 1383 Query: 464 tacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaacaaac 523 |||| || || | | || || || || ||||| |||| ||| | ||||| |||||| Sbjct: 1382 tacaagaggacgaggattccaaaagatagctgccatgacaaacccaatcctcccacaaac 1323 Query: 524 ttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatc 583 || || || |||| ||||||||| ||| | ||||||||||| || || ||||||||| Sbjct: 1322 ttgactacggtctggctgaaccactcaatgagaccatatttgttaagataaccagccatc 1263 Query: 584 gcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 ||||| || ||||| ||||| || || || |||||||| Sbjct: 1262 gcaatgagagcagcgaaccaggtgagtgtgtcccatgc 1225 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 1687 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1628 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 1627 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1568 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 1567 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 1508 Query: 339 ggaa 342 |||| Sbjct: 1507 ggaa 1504
>emb|BX833869.1|CNS0A0DK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL80ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 769 Score = 67.9 bits (34), Expect = 4e-08 Identities = 172/218 (78%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 284 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 225 Query: 464 tacatcagcaccaatacaccgaatgagagttgccaggacagaccgagacctccaacaaac 523 |||| || || | | || || || || ||||| |||| ||| | ||||| |||||| Sbjct: 224 tacaagaggacgaggattccaaaagatagctgccatgacaaacccaatcctcccacaaac 165 Query: 524 ttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgaggtagccagccatc 583 || || || |||| ||||||||| ||| | ||||||||||| || || ||||||||| Sbjct: 164 ttgactacggtctggctgaaccactcaatgagaccatatttgttaagataaccagccatc 105 Query: 584 gcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 ||||| || ||||| ||||| || || || |||||||| Sbjct: 104 gcaatgagagcagcgaaccaggtgagtgtgtcccatgc 67 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 236 aatccatagccccaccactcagccagcggaacatagcccgctccatagaagacgggggct 295 ||||||||||||||||| | ||||||||| || ||| ||||| ||||||| || || Sbjct: 452 aatccatagccccaccatttagccagcggcacgtagttagctccgtagaagataggcgca 393 Query: 296 gaccctatgccataatgggtcaggccacccatgaggtttgaaaggaa 342 ||||| || ||||||||||||| || ||||| ||||| |||||||| Sbjct: 392 gacccgataccataatgggtcaatcctcccatcaggttggaaaggaa 346
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project) Length = 90020 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtgggagtagaag 463 ||||||||||| || || ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 11988 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtgagtgtagaaa 12047 Query: 464 taca 467 |||| Sbjct: 12048 taca 12051 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Plus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 11743 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 11802 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 11803 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 11862 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 11863 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 11922 Query: 339 ggaa 342 |||| Sbjct: 11923 ggaa 11926 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 557 ccatatttgttgaggtagccagccatcgcaatcagcgcagcaaaccaagtaagggtatcc 616 ||||||||||| || || |||||||||||||| || ||||| ||||| || || || ||| Sbjct: 12231 ccatatttgttaagataaccagccatcgcaatgagagcagcgaaccaggtgagtgtgtcc 12290 Query: 617 catgc 621 ||||| Sbjct: 12291 catgc 12295
>emb|BX831984.1|CNS0A12U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH43ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 865 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 681 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 622 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 621 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 562 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 561 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 502 Query: 339 ggaa 342 |||| Sbjct: 501 ggaa 498 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagtg 453 ||||||||||| || || ||||| ||||| |||||||||||||||||||| Sbjct: 436 gcagtgaacatagcaccaatgtgggcagctccactagcaaagaagtagtg 387 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 512 cctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgagg 571 ||||| |||||||| || || |||| ||||||||| ||| | ||||||||||| || Sbjct: 328 cctcccacaaacttgactacggtctggctgaaccactcaataagaccatatttgttaaga 269 Query: 572 tagccagccatcgcaatcagcgcagcaaaccaagtaagggtatcccatgc 621 || |||||||||||||| || ||||| ||||| || || || |||||||| Sbjct: 268 taaccagccatcgcaatgagagcagcgaaccaggtgagtgtgtcccatgc 219
>emb|BX831708.1|CNS0A15V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZB11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1833 Score = 63.9 bits (32), Expect = 6e-07 Identities = 146/184 (79%) Strand = Plus / Minus Query: 159 ctcaccacaaaccaatcatcttccaccagaagcctccagcaccaagccagatgatgatgt 218 |||||||||| ||||| | |||||||||| || || ||||||||||||||| |||| Sbjct: 1694 ctcaccacaagccaatgaacttccaccaggcaccacctacaccaagccagatgagaatgt 1635 Query: 219 taacaacggagatgacaaatccatagccccaccactcagccagcggaacatagcccgctc 278 | || | || || | ||||||||||||||||| | ||||||||| || ||| |||| Sbjct: 1634 tgactattgaaatcaggaatccatagccccaccatttagccagcggcacgtagttagctc 1575 Query: 279 catagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaaa 338 | ||||||| || || ||||| || ||||||||||||| || ||||| ||||| |||| Sbjct: 1574 cgtagaagataggcgcagacccgataccataatgggtcaatcctcccatcaggttggaaa 1515 Query: 339 ggaa 342 |||| Sbjct: 1514 ggaa 1511 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 404 gcagtgaacatcgctccgatgtgtgcagcaccactagcaaagaagtagt 452 ||||| ||||| || || ||||| ||||| ||||||||||||||||||| Sbjct: 1449 gcagttaacatagcaccaatgtgggcagctccactagcaaagaagtagt 1401 Score = 48.1 bits (24), Expect = 0.035 Identities = 75/92 (81%) Strand = Plus / Minus Query: 512 cctccaacaaacttaacaacagtctcgctgaaccaagaaatcaatccatatttgttgagg 571 ||||| |||||||| || || |||| ||||||||| ||| | ||||||||||| || Sbjct: 1341 cctcccacaaacttgactacggtctggctgaaccactcaatgagaccatatttgttaaga 1282 Query: 572 tagccagccatcgcaatcagcgcagcaaacca 603 || |||||||||||||| || ||||| ||||| Sbjct: 1281 taaccagccatcgcaatgagagcagcgaacca 1250
>gb|AY279308.1| Malus x domestica oxoglutarate/malate translocator-like mRNA, partial sequence Length = 419 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 278 ccatagaagacgggggctgaccctatgccataatgggtcaggccacccatgaggtttgaa 337 |||||||| || || ||||| || ||||| |||||||| || |||||||||||||| || Sbjct: 98 ccatagaaaacaggtgctgatccaatgccgtaatgggtaagaccacccatgaggttggag 39 Query: 338 aggaatg 344 ||||||| Sbjct: 38 aggaatg 32
>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome Length = 300923 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 437 ctagcaaagaagtagtgggagtagaagtacatcag 471 |||||||| | |||||||||||||||||| ||||| Sbjct: 245750 ctagcaaaaaggtagtgggagtagaagtagatcag 245716
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 437 ctagcaaagaagtagtgggagtagaagtacatcag 471 |||||||| | |||||||||||||||||| ||||| Sbjct: 592946 ctagcaaaaaggtagtgggagtagaagtagatcag 592980
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 437 ctagcaaagaagtagtgggagtagaagtacatcag 471 |||||||| | |||||||||||||||||| ||||| Sbjct: 248343 ctagcaaaaaggtagtgggagtagaagtagatcag 248309
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 437 ctagcaaagaagtagtgggagtagaagtacatcag 471 |||||||| | |||||||||||||||||| ||||| Sbjct: 247958 ctagcaaaaaggtagtgggagtagaagtagatcag 247924
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 gatgatgatgttaacaacggag 229 |||||||||||||||||||||| Sbjct: 5575716 gatgatgatgttaacaacggag 5575695
>gb|AC154681.2| Mus musculus BAC clone RP24-314G22 from chromosome 14, complete sequence Length = 193716 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 546 aagaaatcaatccatatttgtt 567 |||||||||||||||||||||| Sbjct: 115345 aagaaatcaatccatatttgtt 115366
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 gatgatgatgttaacaacggag 229 |||||||||||||||||||||| Sbjct: 88801 gatgatgatgttaacaacggag 88780
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 gatgatgatgttaacaacggag 229 |||||||||||||||||||||| Sbjct: 37408 gatgatgatgttaacaacggag 37387
>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence Length = 166423 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 ccaagaaatcaatccatattt 564 ||||||||||||||||||||| Sbjct: 161536 ccaagaaatcaatccatattt 161556
>gb|AC110090.6| Mus musculus BAC clone RP23-27L4 from chromosome 1, complete sequence Length = 218518 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 gtgcccaaggcacttgccaca 394 ||||||||||||||||||||| Sbjct: 99819 gtgcccaaggcacttgccaca 99839
>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence Length = 160452 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 agccccaccactcagccagcg 263 ||||||||||||||||||||| Sbjct: 12214 agccccaccactcagccagcg 12194
>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete sequence Length = 319287 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 ccaagaaatcaatccatattt 564 ||||||||||||||||||||| Sbjct: 271775 ccaagaaatcaatccatattt 271795
>gb|AC092891.5| Homo sapiens 12 BAC RP11-495C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109440 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 ccacaaaccaatcatcttccaccag 187 |||||| |||||||||||||||||| Sbjct: 83801 ccacaatccaatcatcttccaccag 83777
>ref|NM_123924.2| Arabidopsis thaliana lipid binding AT5G45560 mRNA, complete cds Length = 2540 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 actaaaagaatggatcatgt 59 |||||||||||||||||||| Sbjct: 1833 actaaaagaatggatcatgt 1852
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccctcgtcgaaataggaagtcc 142 ||||||||||||||||||| |||| Sbjct: 1443551 cgccctcgtcgaaataggacgtcc 1443528
>gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, complete sequence Length = 175861 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 acagacaggaacgcagtgaacatc 415 |||||||||||| ||||||||||| Sbjct: 43413 acagacaggaactcagtgaacatc 43436
>gb|AC007607.6| Homo sapiens chromosome 16 clone RP11-369H7, complete sequence Length = 158941 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 acagacaggaacgcagtgaacatc 415 |||||||||||| ||||||||||| Sbjct: 156047 acagacaggaactcagtgaacatc 156070
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggtgcccaaggcacttgcca 392 |||||||||||||||||||| Sbjct: 57884 ggtgcccaaggcacttgcca 57865
>emb|BX897725.7| Zebrafish DNA sequence from clone CH211-244P18 in linkage group 20 Contains the gene for a novel protein similar to vertebrate delta-like 4 (Drosophila) (DLL4), the vps18 gene for vacuolar protein sorting protein 18, the gene for a novel protein containing an SNF2 family N-terminal domain and a Helicase conserved C-terminal domain, the gene for a novel protein similar to vertebrate ras homolog gene family, member V (RHOV), the gene for a novel protein containing a ChaC-like protein domain and three CpG islands, complete sequence Length = 170125 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccacttgcaaatgttttgct 109 |||||||||||||||||||| Sbjct: 153015 ccacttgcaaatgttttgct 153034
>gb|AY064989.1| Arabidopsis thaliana AT5g45560/MFC19_23 mRNA, complete cds Length = 2540 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 actaaaagaatggatcatgt 59 |||||||||||||||||||| Sbjct: 1833 actaaaagaatggatcatgt 1852
>dbj|AK013707.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900056N03 product:hypothetical protein, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agtagaagtacatcagcacc 475 |||||||||||||||||||| Sbjct: 407 agtagaagtacatcagcacc 426
>gb|BC058336.1| Mus musculus human immunodeficiency virus type I enhancer binding protein 3, mRNA (cDNA clone IMAGE:5693302) Length = 1176 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agtagaagtacatcagcacc 475 |||||||||||||||||||| Sbjct: 459 agtagaagtacatcagcacc 478
>gb|BC049859.1| Mus musculus human immunodeficiency virus type I enhancer binding protein 3, mRNA (cDNA clone IMAGE:5007445) Length = 1057 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agtagaagtacatcagcacc 475 |||||||||||||||||||| Sbjct: 360 agtagaagtacatcagcacc 379
>dbj|AB022213.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2N11 Length = 30340 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 actaaaagaatggatcatgt 59 |||||||||||||||||||| Sbjct: 4179 actaaaagaatggatcatgt 4198
>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence Length = 187652 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 536 tcgctgaaccaagaaatcaa 555 |||||||||||||||||||| Sbjct: 121623 tcgctgaaccaagaaatcaa 121604
>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cagaagcctccagcaccaag 204 |||||||||||||||||||| Sbjct: 26195 cagaagcctccagcaccaag 26214
>emb|AL929049.4| Zebrafish DNA sequence from clone DKEY-14A13 in linkage group 20, complete sequence Length = 223182 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 ccacttgcaaatgttttgct 109 |||||||||||||||||||| Sbjct: 160254 ccacttgcaaatgttttgct 160273
>gb|BC099611.1| Mus musculus human immunodeficiency virus type I enhancer binding protein 3, mRNA (cDNA clone IMAGE:3373550) Length = 1150 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agtagaagtacatcagcacc 475 |||||||||||||||||||| Sbjct: 447 agtagaagtacatcagcacc 466
>gb|BC096407.1| Mus musculus human immunodeficiency virus type I enhancer binding protein 3, mRNA (cDNA clone IMAGE:3373549) Length = 1158 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 agtagaagtacatcagcacc 475 |||||||||||||||||||| Sbjct: 456 agtagaagtacatcagcacc 475 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,722,712 Number of Sequences: 3902068 Number of extensions: 4722712 Number of successful extensions: 84326 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84105 Number of HSP's gapped (non-prelim): 218 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
