ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRGRE_MOUSE (Q91ZB7) Mas-related G-protein coupled receptor memb... 28 4.6
2MRGRE_HUMAN (Q86SM8) Mas-related G-protein coupled receptor memb... 28 4.6
3MRGRE_MACFA (Q5U9D7) Mas-related G-protein coupled receptor memb... 28 6.0
4Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800 28 6.0
5PYHD_NPVMB (P12423) Polyhedrin (Major occlusion protein) 28 7.8

>MRGRE_MOUSE (Q91ZB7) Mas-related G-protein coupled receptor member E|
           (Evolutionary breakpoint transcript 3 protein)
          Length = 310

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 207 LSLSLEVSLRSQ*CYRLFCPPWLNFGELRFCTGC*APSAWSLC----L*LAGTCLAVLG 43
           + LSL  ++ ++ C     P W      R+ T C     W LC    L L+G C    G
Sbjct: 105 VGLSLLAAISTEQCLATLFPAWYLCRRPRYLTTCVCALIWVLCLLLDLLLSGACTQFFG 163



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>MRGRE_HUMAN (Q86SM8) Mas-related G-protein coupled receptor member E (G-protein|
           coupled receptor 167) (Fragment)
          Length = 145

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 207 LSLSLEVSLRSQ*CYRLFCPPWLNFGELRFCTGC*APSAWSLC----L*LAGTCLAVLG 43
           + LSL  ++  + C     P W +    R  T C     W+LC    L L+G C    G
Sbjct: 52  VGLSLLAAVSVEQCLAALFPAWYSCRRPRHLTTCVCALTWALCLLLHLLLSGACTQFFG 110



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>MRGRE_MACFA (Q5U9D7) Mas-related G-protein coupled receptor member E|
          Length = 311

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
 Frame = -3

Query: 207 LSLSLEVSLRSQ*CYRLFCPPWLNFGELRFCTGC*APSAWSLC----L*LAGTCLAVLG 43
           + LSL V++  + C     P W +    R  T C     W+ C    L L+G C    G
Sbjct: 108 VGLSLLVAVSVEQCLAALFPAWYSCRRPRHLTTCVCALTWACCLLLHLLLSGACTQFFG 166



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>Y2800_ANASP (Q8YTC2) Hypothetical WD-repeat protein alr2800|
          Length = 1258

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 43   AQHGQTGACQS*AERPGRWSLTTSAKTQLTKVQPWRTKQSIASLRPQTDF 192
            A +G T      A  P R  L + +  +  K+  W+T + I+SL   TDF
Sbjct: 931  AWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDF 980



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>PYHD_NPVMB (P12423) Polyhedrin (Major occlusion protein)|
          Length = 246

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 33  LNSSPTRPNRCLPIIGRETRQMEPN 107
           +N  PTRPNRC   + +   + +P+
Sbjct: 123 INMRPTRPNRCFKFLAQHALRCDPD 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,381,335
Number of Sequences: 219361
Number of extensions: 676388
Number of successful extensions: 1541
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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