ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37061.1|WHTHSP169A Triticum aestivum heat shock protein 16.9... 62 6e-07
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 4e-05
3dbj|AB110191.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 4e-05
4gb|AF467729.1| Oryza sativa heat shock-like protein mRNA, partia... 56 4e-05
5gb|AY034057.1| Oryza sativa class I low-molecular-weight heat sh... 56 4e-05
6gb|L37064.1|WHTHSP169F Triticum aestivum L. (clone 12LC2) heat s... 56 4e-05
7gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome... 56 4e-05
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 4e-05
9dbj|AK119675.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
10dbj|AK119664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
11dbj|AK119616.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
12dbj|AK119239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
13dbj|AK104129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
14dbj|AK073671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 4e-05
15ref|NM_187465.1| Oryza sativa (japonica cultivar-group), predic... 52 6e-04
16ref|NM_187471.1| Oryza sativa (japonica cultivar-group), predic... 52 6e-04
17gb|L37062.1|WHTHSP169D Triticum aestivum heat shock protein 16.9... 52 6e-04
18gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome... 52 6e-04
19dbj|AK120655.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 6e-04
20dbj|AK069547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 6e-04
21gb|U83671.1|OSU83671 Oryza sativa low molecular mass heat shock ... 52 6e-04
22gb|L37071.1|WHTHSP169M Triticum aestivum clone 1LC1 heat shock p... 50 0.002
23ref|NM_187469.1| Oryza sativa (japonica cultivar-group), predic... 44 0.14
24gb|M80186.1|RICLMWHSP Oryza sativa LMW heat shock protein mRNA, ... 44 0.14
25dbj|AK119717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.14
26dbj|AK119243.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.14
27gb|U83669.1|OSU83669 Oryza sativa low molecular mass heat shock ... 44 0.14
28dbj|D12635.1|RICYLMWHSP Oryza sativa (japonica cultivar-group) m... 44 0.14
29gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 42 0.54
30gb|BT016867.1| Zea mays clone Contig700 mRNA sequence 40 2.1
31gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome... 40 2.1
32gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, co... 40 2.1
33gb|AY098528.1| Ananas comosus class-1 LMW heat shock protein mRN... 40 2.1
34gb|AC107664.8| Mus musculus chromosome 17, clone RP23-103F2, com... 38 8.4
35emb|AL935257.1| Lactobacillus plantarum strain WCFS1 complete ge... 38 8.4
36gb|L37075.1|WHTHSP169Q Triticum aestivum clone 5LC1 heat shock p... 38 8.4
37gb|L37067.1|WHTHSP169I Triticum aestivum clone 15LC1 heat shock ... 38 8.4
38gb|AC140054.5| Mus musculus BAC clone RP23-117L24 from chromosom... 38 8.4
39emb|X64618.1|TAHSP169B T.aestivum mRNA for heat shock protein 16.9B 38 8.4
40emb|CT030640.9| Mouse DNA sequence from clone RP24-78F21 on chro... 38 8.4
41emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on ch... 38 8.4 
>gb|L37061.1|WHTHSP169A Triticum aestivum heat shock protein 16.9 (hsp16.9-10LC1) mRNA,
           partial cds
          Length = 325

 Score = 61.9 bits (31), Expect = 6e-07
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 135 gcctagccggagatctggatggacttgatctcggg 169
           |||||||||||||||||||||||||||| ||||||
Sbjct: 68  gcctagccggagatctggatggacttgacctcggg 34
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                           
Query: 135     gcctagccggagatctggatggacttga 162
               ||||||||||||||||||||||||||||
Sbjct: 8778544 gcctagccggagatctggatggacttga 8778517



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 137     ctagccggagatctggatggacttga 162
               ||||||||||||||||||||||||||
Sbjct: 8810304 ctagccggagatctggatggacttga 8810329



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 137     ctagccggagatctggatggacttga 162
               |||||||| |||||||||||||||||
Sbjct: 8806186 ctagccggtgatctggatggacttga 8806211
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>dbj|AB110191.1| Oryza sativa (japonica cultivar-group) mRNA for heat shock protein
           18, complete cds, clone: 21C4AB003
          Length = 810

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 571 gcctagccggagatctggatggacttga 544
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>gb|AF467729.1| Oryza sativa heat shock-like protein mRNA, partial cds
          Length = 464

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 187 gcctagccggagatctggatggacttga 160
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>gb|AY034057.1| Oryza sativa class I low-molecular-weight heat shock protein 17.9
            (hsp17.9) gene, complete cds
          Length = 2618

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                        
Query: 135  gcctagccggagatctggatggacttga 162
            ||||||||||||||||||||||||||||
Sbjct: 2148 gcctagccggagatctggatggacttga 2121
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>gb|L37064.1|WHTHSP169F Triticum aestivum L. (clone 12LC2) heat shock protein
           (hsp16.9-12LC2) mRNA, partial cds
          Length = 135

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 68  gcctagccggagatctggatggacttga 41
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>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
             complete sequence
          Length = 112265

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 135   gcctagccggagatctggatggacttga 162
             ||||||||||||||||||||||||||||
Sbjct: 21697 gcctagccggagatctggatggacttga 21670



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 137   ctagccggagatctggatggacttga 162
             ||||||||||||||||||||||||||
Sbjct: 53457 ctagccggagatctggatggacttga 53482



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 137   ctagccggagatctggatggacttga 162
             |||||||| |||||||||||||||||
Sbjct: 49339 ctagccggtgatctggatggacttga 49364
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                           
Query: 135     gcctagccggagatctggatggacttga 162
               ||||||||||||||||||||||||||||
Sbjct: 8776379 gcctagccggagatctggatggacttga 8776352



 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                         
Query: 137     ctagccggagatctggatggacttga 162
               ||||||||||||||||||||||||||
Sbjct: 8808139 ctagccggagatctggatggacttga 8808164



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 137     ctagccggagatctggatggacttga 162
               |||||||| |||||||||||||||||
Sbjct: 8804021 ctagccggtgatctggatggacttga 8804046
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>dbj|AK119675.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G10, full
           insert sequence
          Length = 847

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 592 gcctagccggagatctggatggacttga 565
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>dbj|AK119664.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-D02, full
           insert sequence
          Length = 848

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 596 gcctagccggagatctggatggacttga 569
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>dbj|AK119616.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-G08, full
           insert sequence
          Length = 850

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 596 gcctagccggagatctggatggacttga 569
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>dbj|AK119239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-A01, full
           insert sequence
          Length = 847

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 592 gcctagccggagatctggatggacttga 565
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>dbj|AK104129.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F10, full
           insert sequence
          Length = 990

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 705 gcctagccggagatctggatggacttga 678
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>dbj|AK073671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051H23, full
           insert sequence
          Length = 842

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 135 gcctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||||
Sbjct: 590 gcctagccggagatctggatggacttga 563
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>ref|NM_187465.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 486

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||
Sbjct: 486 ctagccggagatctggatggacttga 461
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>ref|NM_187471.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 480

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||
Sbjct: 480 ctagccggagatctggatggacttga 455
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>gb|L37062.1|WHTHSP169D Triticum aestivum heat shock protein 16.9 (hsp16.9-11LC1) mRNA,
           partial cds
          Length = 294

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 140 gccggagatctggatggacttgatctcggg 169
           ||||||||||||||||||||||| ||||||
Sbjct: 63  gccggagatctggatggacttgacctcggg 34
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>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
            complete sequence
          Length = 126027

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 137  ctagccggagatctggatggacttga 162
            ||||||||||||||||||||||||||
Sbjct: 1192 ctagccggagatctggatggacttga 1217
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>dbj|AK120655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157L10, full
           insert sequence
          Length = 4025

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||
Sbjct: 850 ctagccggagatctggatggacttga 875
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>dbj|AK069547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021P13, full
           insert sequence
          Length = 712

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           ||||||||||||||||||||||||||
Sbjct: 501 ctagccggagatctggatggacttga 476
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>gb|U83671.1|OSU83671 Oryza sativa low molecular mass heat shock protein Oshsp17.7
            (OSHSP17.7) gene, complete cds
          Length = 1535

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 137  ctagccggagatctggatggacttga 162
            ||||||||||||||||||||||||||
Sbjct: 1101 ctagccggagatctggatggacttga 1076
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>gb|L37071.1|WHTHSP169M Triticum aestivum clone 1LC1 heat shock protein 16.9 (hsp16.9-1LC1)
           mRNA, partial cds
          Length = 315

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 137 ctagccggagatctggatggacttgatctcggg 169
           |||||||||||| ||||||||||||| ||||||
Sbjct: 66  ctagccggagatatggatggacttgacctcggg 34
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>ref|NM_187469.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 465

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 465 ctagccggtgatctggatggacttga 440
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>gb|M80186.1|RICLMWHSP Oryza sativa LMW heat shock protein mRNA, complete CDS
          Length = 801

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 546 ctagccggtgatctggatggacttga 521
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>dbj|AK119717.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F11, full
           insert sequence
          Length = 750

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 558 ctagccggtgatctggatggacttga 533
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>dbj|AK119243.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B05, full
           insert sequence
          Length = 753

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 558 ctagccggtgatctggatggacttga 533
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>gb|U83669.1|OSU83669 Oryza sativa low molecular mass heat shock protein Oshsp17.3
           (OSHSP17.3) gene, complete cds
          Length = 1300

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 925 ctagccggtgatctggatggacttga 900
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>dbj|D12635.1|RICYLMWHSP Oryza sativa (japonica cultivar-group) mRNA for low molecular
           weight heat shock protein, complete cds
          Length = 690

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 137 ctagccggagatctggatggacttga 162
           |||||||| |||||||||||||||||
Sbjct: 490 ctagccggtgatctggatggacttga 465
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 42.1 bits (21), Expect = 0.54
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 57      cccatatccacaccagctaaa 77
               |||||||||||||||||||||
Sbjct: 2015679 cccatatccacaccagctaaa 2015699
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>gb|BT016867.1| Zea mays clone Contig700 mRNA sequence
          Length = 698

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 137 ctagccggagatctggatggactt 160
           ||||||||||||||| ||||||||
Sbjct: 596 ctagccggagatctgaatggactt 573
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>gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome 3, complete sequence
          Length = 194060

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     gcaaggccacacttgatgct 47
              ||||||||||||||||||||
Sbjct: 192540 gcaaggccacacttgatgct 192521
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>gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, complete sequence
          Length = 205473

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gcaaggccacacttgatgct 47
              ||||||||||||||||||||
Sbjct: 161915 gcaaggccacacttgatgct 161934
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>gb|AY098528.1| Ananas comosus class-1 LMW heat shock protein mRNA, complete cds
          Length = 911

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 139 agccggagatctggatggacttga 162
           ||||||||||||||| ||||||||
Sbjct: 557 agccggagatctggacggacttga 534
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>gb|AC107664.8| Mus musculus chromosome 17, clone RP23-103F2, complete sequence
          Length = 208198

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 16     cacagtgggtgngcaaggccacactt 41
              ||||||||||  ||||||||||||||
Sbjct: 205741 cacagtgggtaagcaaggccacactt 205766
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>emb|AL935257.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 6/11
          Length = 302050

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    gatctggatggacttgatc 164
              |||||||||||||||||||
Sbjct: 227149 gatctggatggacttgatc 227167
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>gb|L37075.1|WHTHSP169Q Triticum aestivum clone 5LC1 heat shock protein 16.9 (hsp16.9-5LC1)
           mRNA, partial cds
          Length = 245

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 139 agccggagatctggatggacttgatctcggg 169
           |||||||||||||||||| ||| | ||||||
Sbjct: 64  agccggagatctggatggccttcacctcggg 34
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>gb|L37067.1|WHTHSP169I Triticum aestivum clone 15LC1 heat shock protein 16.9
           (hsp16.9-15LC1) mRNA, partial cds
          Length = 204

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 139 agccggagatctggatggacttgatctcggg 169
           |||||||||||||||||| ||| | ||||||
Sbjct: 64  agccggagatctggatggccttcacctcggg 34
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>gb|AC140054.5| Mus musculus BAC clone RP23-117L24 from chromosome 9, complete sequence
          Length = 222698

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 124    atcttgcagcagcctagcc 142
              |||||||||||||||||||
Sbjct: 197759 atcttgcagcagcctagcc 197777
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>emb|X64618.1|TAHSP169B T.aestivum mRNA for heat shock protein 16.9B
          Length = 1070

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 139 agccggagatctggatggacttgatctcggg 169
           |||||||||||||||||| ||| | ||||||
Sbjct: 484 agccggagatctggatggccttcacctcggg 454
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>emb|CT030640.9| Mouse DNA sequence from clone RP24-78F21 on chromosome 9, complete
              sequence
          Length = 225365

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 124    atcttgcagcagcctagcc 142
              |||||||||||||||||||
Sbjct: 172532 atcttgcagcagcctagcc 172550
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>emb|CT010429.11| Mouse DNA sequence from clone RP23-306H20 on chromosome 17, complete
             sequence
          Length = 191390

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 16    cacagtgggtgngcaaggccacactt 41
             ||||||||||  ||||||||||||||
Sbjct: 42478 cacagtgggtaagcaaggccacactt 42503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 947,881
Number of Sequences: 3902068
Number of extensions: 947881
Number of successful extensions: 62229
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62113
Number of HSP's gapped (non-prelim): 116
length of query: 172
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 150
effective length of database: 17,147,199,772
effective search space: 2572079965800
effective search space used: 2572079965800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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