Clone Information

BLAST Search Result

Clone Name	rbaal30o23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	176	9e-45
2	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	175	3e-44
3	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	174	3e-44
4	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	173	1e-43
5	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	172	2e-43
6	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	171	5e-43
7	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	170	7e-43
8	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	170	9e-43
9	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	167	6e-42
10	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	133	1e-31
11	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	130	8e-31
12	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	128	3e-30
13	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	111	5e-25
14	PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep...	104	6e-23
15	PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep...	99	3e-21
16	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	98	5e-21
17	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	98	5e-21
18	PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep...	94	1e-19
19	PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (3...	35	0.056
20	MYCD_RAT (Q8R5I7) Myocardin	30	1.1
21	RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)	30	1.1
22	RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Prote...	30	1.1
23	MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial pre...	30	1.4
24	MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial p...	30	1.4
25	DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta...	30	1.4
26	EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi	30	1.8
27	PPNK_BORPE (Q7VVX6) Probable inorganic polyphosphate/ATP-NAD kin...	29	3.1
28	PPNK_BORPA (Q7W513) Probable inorganic polyphosphate/ATP-NAD kin...	29	3.1
29	PPNK_BORBR (Q7WGH8) Probable inorganic polyphosphate/ATP-NAD kin...	29	3.1
30	ZBTB9_HUMAN (Q96C00) Zinc finger and BTB domain-containing prote...	29	3.1
31	TIBA_ECOLI (Q9XD84) Adhesin/invasin tibA precursor (Glycoprotein...	28	4.0
32	RIC8B_RAT (Q80ZG0) Synembryn-B (Protein Ric-8B)	28	5.3
33	MYC_AVIME (P0C0N8) Viral myc transforming protein (v-Myc)	28	6.9
34	BIR1_SCHPO (O14064) Protein bir1 (Chromosome segregation protein...	28	6.9
35	SDHD_BACHK (Q6HKG3) Probable D-serine dehydratase (EC 4.3.1.18) ...	28	6.9
36	SDHD_BACCZ (Q63D23) Probable D-serine dehydratase (EC 4.3.1.18) ...	28	6.9
37	RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribo...	27	9.0
38	PDR15_ORYSA (Q7FMW4) Pleiotropic drug resistance protein 15	27	9.0
39	FLGI2_YERPS (Q666C5) Flagellar P-ring protein 2 precursor (Basal...	27	9.0
40	FLGI1_YERPE (Q8ZHZ4) Flagellar P-ring protein 1 precursor (Basal...	27	9.0
41	ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86) (A...	27	9.0
42	EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear a...	27	9.0
43	LET6_LYCES (O22299) Homeobox protein knotted-1-like LET6	27	9.0

>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  176 bits (447), Expect = 9e-45
 Identities = 86/97 (88%), Positives = 90/97 (92%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL KENVKN SSSTG ITLSVT+S PE
Sbjct: 236 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPE 295

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct: 296 TGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332

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>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  175 bits (443), Expect = 3e-44
 Identities = 90/99 (90%), Positives = 92/99 (92%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NA ALP GGRGDEEELAKENVKNASSSTGNITLSVTKS PE
Sbjct: 229 YRGSSFLDPKGRGGSTGYDNAGALPRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPE 288

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 103
           +GEVIGVFESVQPSDTDL  +APKDVKIQGVWYAQLESN
Sbjct: 289 TGEVIGVFESVQPSDTDL--EAPKDVKIQGVWYAQLESN 325

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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  174 bits (442), Expect = 3e-44
 Identities = 84/97 (86%), Positives = 90/97 (92%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGS G  NAVALPAGGRGDEEEL KEN+K+ SSSTG ITLSVTKS PE
Sbjct: 233 YRGSSFLDPKGRGGSAGYDNAVALPAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPE 292

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVFES+QPSDTDLG+KAPKDVKIQG+WYAQLE
Sbjct: 293 TGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  173 bits (438), Expect = 1e-43
 Identities = 84/97 (86%), Positives = 89/97 (91%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL KENVKN +S TG ITLSVT+S PE
Sbjct: 233 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPE 292

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct: 293 TGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  172 bits (436), Expect = 2e-43
 Identities = 83/98 (84%), Positives = 89/98 (90%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL KENVKN +S TG IT +VTKS P+
Sbjct: 236 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQ 295

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 106
           +GEVIGVFES+QPSDTDLGAK PKDVKIQG+WYAQLES
Sbjct: 296 TGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLES 333

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  171 bits (432), Expect = 5e-43
 Identities = 83/97 (85%), Positives = 87/97 (89%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL KENVKN ++S G ITL VTKS PE
Sbjct: 236 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPE 295

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVFES+QPSDTDLGAK PKDVKIQGVWY QLE
Sbjct: 296 TGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  170 bits (431), Expect = 7e-43
 Identities = 84/98 (85%), Positives = 90/98 (91%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRG STG  NAVALPAGGRGDEEEL KEN K+A+SS G ITLSVT++ PE
Sbjct: 232 YRGSSFLDPKGRGASTGYDNAVALPAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPE 291

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLES 106
           +GEVIGVFES+QPSDTDLGAKAPKDVKIQGVWYAQLES
Sbjct: 292 TGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLES 329

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  170 bits (430), Expect = 9e-43
 Identities = 81/97 (83%), Positives = 88/97 (90%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL+KENVKN ++S G ITL +TKS PE
Sbjct: 235 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELSKENVKNTAASVGEITLKITKSKPE 294

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVFES+QPSDTDLGAK PKDVKIQGVWY Q+E
Sbjct: 295 TGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  167 bits (423), Expect = 6e-42
 Identities = 82/97 (84%), Positives = 87/97 (89%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPAGGRGDEEEL KEN KN +SS G ITLSVT S PE
Sbjct: 234 YRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPE 293

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEVIGVF+S+QPSDTDLGAK PKDVKI+GVWYAQLE
Sbjct: 294 TGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLE 330

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  133 bits (334), Expect = 1e-31
 Identities = 66/97 (68%), Positives = 75/97 (77%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPA  R D EEL KENVK   +  G+   SV K  P 
Sbjct: 197 YRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPV 254

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+
Sbjct: 255 TGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  130 bits (327), Expect = 8e-31
 Identities = 65/96 (67%), Positives = 73/96 (76%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRGSSFLDPKGRGGSTG  NAVALPA  R D EEL KENVK+  +  G+   SV K    
Sbjct: 198 YRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKSTKALKGSAVFSVAKVNTA 255

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 112
           +GE+ GVFES+QPSDTDLGAK PKD+KI G+WY QL
Sbjct: 256 TGEIAGVFESIQPSDTDLGAKPPKDIKITGLWYGQL 291

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  128 bits (322), Expect = 3e-30
 Identities = 61/96 (63%), Positives = 74/96 (77%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRG++FLDPKGRGG++G   AVALPA G  D+EE AKEN K+ ++S G I   V K   E
Sbjct: 241 YRGATFLDPKGRGGASGYDTAVALPASG--DDEEYAKENSKSTAASVGTIAFKVAKVNAE 298

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 112
           +GE+ GVFES+QPSDTDLGAK PKD+K  GVWYAQ+
Sbjct: 299 TGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  111 bits (277), Expect = 5e-25
 Identities = 55/97 (56%), Positives = 71/97 (73%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRG++FLDPKGRG  +G  NAVALPA  + D+E+L + NVK A    G I+L + K    
Sbjct: 179 YRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSS 236

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           SGE+ G FES QPSDTDLGA  PK+VKI+G++YA++E
Sbjct: 237 SGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273

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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  104 bits (259), Expect = 6e-23
 Identities = 55/96 (57%), Positives = 71/96 (73%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRG++FLDPKGRG +TG  NAVALPA    D+E+ A  NVK      G+I+L VTK    
Sbjct: 180 YRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQA 235

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQL 112
           +GE+ GVF+S QPSDTDLGAK P +VKI+G++YA++
Sbjct: 236 TGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271

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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 50/97 (51%), Positives = 68/97 (70%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YR S+FLDPK RG +TG  +AVA+P+ G  D E+L KENVK   +  G I+L+V+K    
Sbjct: 179 YRTSNFLDPKARGLTTGYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGA 236

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GEV GVF ++QPSDTD+G K   DVK+ G +Y ++E
Sbjct: 237 TGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YR ++FLDPKGRG ++G  +A+ALP   +  EEELA+ NVK  S + G I+L+V K    
Sbjct: 177 YRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGR 233

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GE+ G FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 234 TGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 97.8 bits (242), Expect = 5e-21
 Identities = 51/97 (52%), Positives = 68/97 (70%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YR ++FLDPKGRG ++G  +A+ALP   +  EEELA+ NVK  S + G I+L+V K    
Sbjct: 177 YRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGR 233

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 109
           +GE+ G FES Q SD D+GA  P +VKIQGV+YA +E
Sbjct: 234 TGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270

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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = -2

Query: 399 YRGSSFLDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPE 220
           YRG+ FLDPK RG  TG  NAVALP+       +  + N K      G ++L VT+    
Sbjct: 180 YRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGS 234

Query: 219 SGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLESN 103
           +GE+ G+FES QPSDTDLGAK P DVK++G++Y +++++
Sbjct: 235 TGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVDTD 273

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>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit|
           of oxygen evolving system of photosystem II) (33 kDa
           thylakoid membrane protein) (Fragments)
          Length = 26

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 372 KGRGGSTGXXNAVALPAGGR 313
           + +GGSTG  NAVALPAGGR
Sbjct: 7   QSKGGSTGYDNAVALPAGGR 26

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>MYCD_RAT (Q8R5I7) Myocardin|
          Length = 938

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -2

Query: 378 DPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPESG-EVIG 202
           DP+G GGST    +   P  G  D      +++   S S  N T S   +  +SG +V+G
Sbjct: 171 DPQGSGGSTPDIKSTEAPLAGPLD----TIQDLTPGSESDKNDTASQLSNQSDSGKQVLG 226

Query: 201 VFESVQPSDTDLGAKAPKDVK 139
              +  P  T + +K+  D K
Sbjct: 227 PLSTPIPVHTAVKSKSLGDSK 247

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>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)|
          Length = 560

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -2

Query: 396 RGSSFLDPKGRGGSTGXXNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 232
           R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   IT  + +
Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494

Query: 231 SXP 223
             P
Sbjct: 495 PMP 497

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>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)|
          Length = 536

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = -2

Query: 396 RGSSFLDPKGRGGSTGXXNAVALPAGGRGD-----EEELAKENVKNASSSTGNITLSVTK 232
           R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   IT  + +
Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLITGHLEE 494

Query: 231 SXP 223
             P
Sbjct: 495 PMP 497

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>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1)
          Length = 373

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 186 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKXLIFCAC 61
           QP    +     KD+K++G W +Q + N S  E K LI   C
Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILC 332

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>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38)
          Length = 373

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 186 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKXLIFCAC 61
           QP    +     KD+K++G W +Q + N S  E K LI   C
Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332

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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 318 GRGDEEELAKENVKNASSSTGNITLSVTKSXPESGEVIGVFESVQ 184
           G+  E   + +N+KN+     NI    T S PE+ E+I     +Q
Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449

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>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi|
          Length = 700

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
 Frame = -2

Query: 393 GSSFLDPKGRGG---STGXXNAVALPAGG----RGDEEELAKENVKNASSSTGN 253
           G ++    G GG   STG  N+ + PAGG     G  ++ ++ + +  SSS+GN
Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223

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>PPNK_BORPE (Q7VVX6) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 299

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 188 TLSKTPITSPDSGLLLVTLRVMLPVE 265
           TLS  PI  PDSG+L +TL  M  VE
Sbjct: 213 TLSNRPIVIPDSGVLNMTLTAMGRVE 238

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>PPNK_BORPA (Q7W513) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 299

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 188 TLSKTPITSPDSGLLLVTLRVMLPVE 265
           TLS  PI  PDSG+L +TL  M  VE
Sbjct: 213 TLSNRPIVIPDSGVLNMTLTAMGRVE 238

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>PPNK_BORBR (Q7WGH8) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 299

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 188 TLSKTPITSPDSGLLLVTLRVMLPVE 265
           TLS  PI  PDSG+L +TL  M  VE
Sbjct: 213 TLSNRPIVIPDSGVLNMTLTAMGRVE 238

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>ZBTB9_HUMAN (Q96C00) Zinc finger and BTB domain-containing protein 9|
          Length = 473

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
 Frame = -2

Query: 396 RGSSFLDPKGRGGSTGXXNAVALPAGGRGDE---------EELAKENVKNASSSTGNITL 244
           R S F  P     ST    +   P GG G E         EE  +E   +     G+ TL
Sbjct: 172 RSSPFQTPVQSSASTESPASTESPVGGEGSELGEVLQIQVEEEEEEEEDDDDEDQGSATL 231

Query: 243 SVTKSXPESGEVIGVF 196
           S T   P+   V GVF
Sbjct: 232 SQT---PQPQRVSGVF 244

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>TIBA_ECOLI (Q9XD84) Adhesin/invasin tibA precursor (Glycoprotein tibA)|
          Length = 989

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/77 (28%), Positives = 32/77 (41%)
 Frame = -2

Query: 351 GXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPESGEVIGVFESVQPSDT 172
           G  + V   +GG       A  +  N + S      S      E+G  + VF+  Q SDT
Sbjct: 304 GSASKVIQNSGGAVITNTSAAVSGTNDNGSFSIAGGSAVNMLLENGGYLTVFDGHQASDT 363

Query: 171 DLGAKAPKDVKIQGVWY 121
            +G+    DV+  GV Y
Sbjct: 364 MVGSDGTLDVRSGGVLY 380

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>RIC8B_RAT (Q80ZG0) Synembryn-B (Protein Ric-8B)|
          Length = 520

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -2

Query: 396 RGSSFLDPKGRGGSTGXXNAVALPAGGRGD-----EEELAKENVKNA 271
           R  S L   G G + G   A  L AGGRGD     +E+   E  KNA
Sbjct: 435 RVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNA 481

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>MYC_AVIME (P0C0N8) Viral myc transforming protein (v-Myc)|
          Length = 412

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
 Frame = -2

Query: 393 GSS--FLDPKGRGGSTGXXNAVAL------PAGGRGDEEELAKENVKNASSSTGNITLSV 238
           GSS  F  P GR G  G   A  L       AGG  +EE+   E +   + +  N + S 
Sbjct: 190 GSSVVFPCPLGRRGPPGAGPAALLGVDAPPTAGGGSEEEQEEDEEIDVVTLAEANESESS 249

Query: 237 TKSXPESGE 211
           T+S  E+ E
Sbjct: 250 TESSTEASE 258

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>BIR1_SCHPO (O14064) Protein bir1 (Chromosome segregation protein cut17)|
          Length = 997

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 288 ENVKNASSSTGNITLSVTKSXPESGEVIGVFESVQPSDTD 169
           + +KN+ +S  N T SV+K+ PE    +   ++V   D +
Sbjct: 811 QEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSKKDVE 850

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>SDHD_BACHK (Q6HKG3) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine|
           deaminase) (DSD)
          Length = 446

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 306 EEELAKENVKNASSSTGNITLSVTKSXPESGEVIGVFES 190
           +  L++ENVK+A          + K  PE+ E  G+ ES
Sbjct: 39  DSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIES 77

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>SDHD_BACCZ (Q63D23) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine|
           deaminase) (DSD)
          Length = 446

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 306 EEELAKENVKNASSSTGNITLSVTKSXPESGEVIGVFES 190
           +  L++ENVK+A          + K  PE+ E  G+ ES
Sbjct: 39  DSPLSEENVKDAEERLKRFASYIAKVFPETKETKGIIES 77

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>RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribosomal protein|
           RPA1)
          Length = 113

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -2

Query: 375 PKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSS 262
           P G GG+    +A    A G GD++E  KE  K  S S
Sbjct: 66  PVGGGGAVAAADAAPAAAAG-GDKKEAKKEEKKEESES 102

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>PDR15_ORYSA (Q7FMW4) Pleiotropic drug resistance protein 15|
          Length = 1509

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
 Frame = -1

Query: 394  GFLFPRPKGP-WWL--YWL 347
            GF  PRPK P WW+  YWL
Sbjct: 1414 GFFIPRPKIPKWWVWYYWL 1432

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>FLGI2_YERPS (Q666C5) Flagellar P-ring protein 2 precursor (Basal body P-ring|
           protein 2)
          Length = 370

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -2

Query: 381 LDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPESGEV 208
           +DPK +  +    +A   P  GRG   ++   ++ +A S  G  TL +T+     GEV
Sbjct: 82  MDPKVKNVAAVAISATLPPGYGRGQSIDITVSSIGDAKSLRGG-TLLLTQLRGADGEV 138

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>FLGI1_YERPE (Q8ZHZ4) Flagellar P-ring protein 1 precursor (Basal body P-ring|
           protein 1)
          Length = 370

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -2

Query: 381 LDPKGRGGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSXPESGEV 208
           +DPK +  +    +A   P  GRG   ++   ++ +A S  G  TL +T+     GEV
Sbjct: 82  MDPKVKNVAAVAISATLPPGYGRGQSIDITVSSIGDAKSLRGG-TLLLTQLRGADGEV 138

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>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)|
           (Acetohydroxy-acid isomeroreductase)
           (Alpha-keto-beta-hydroxylacil reductoisomerase)
          Length = 330

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 249 TLSVTKSXPESGEVIGVFESVQPSD 175
           +LSV+K+  E  EV+GV E VQ SD
Sbjct: 52  SLSVSKAKKEGFEVLGVKELVQQSD 76

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>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 120 RTTHPGS*HPWAPW 161
           R+ HP   HPWAPW
Sbjct: 799 RSQHPCYRHPWAPW 812

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>LET6_LYCES (O22299) Homeobox protein knotted-1-like LET6|
          Length = 355

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -2

Query: 363 GGSTGXXNAVALPAGGRGDEEELAKENVKNASSSTGNITL 244
           GGS+G  +   L   G GD E     N     +  GN+T+
Sbjct: 3   GGSSGNTSTSCLMMMGYGDHENNNNNNGNGNGNGNGNVTI 42


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,675,749
Number of Sequences: 219361
Number of extensions: 763500
Number of successful extensions: 3324
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3313
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result