ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31d15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRS2L_HUMAN (Q9HD23) Magnesium transporter MRS2L, mitochondrial ... 28 9.3
2MRS2L_RAT (Q9ET09) Magnesium transporter MRS2L, mitochondrial pr... 28 9.3
3MRS2L_MOUSE (Q5NCE8) Magnesium transporter MRS2L, mitochondrial ... 28 9.3
4MRS2L_MACFA (Q4R4M1) Magnesium transporter MRS2L, mitochondrial ... 28 9.3

>MRS2L_HUMAN (Q9HD23) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 443

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  HSTVDRDRLHWRTHNGQGLVNPETE 117
           HS+VDR +LH    NG+ L   ET+
Sbjct: 223 HSSVDRSKLHILLQNGKSLSELETD 247



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>MRS2L_RAT (Q9ET09) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 434

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  HSTVDRDRLHWRTHNGQGLVNPETE 117
           HS+VDR +LH    NG+ L   ET+
Sbjct: 214 HSSVDRSKLHVLLQNGKSLSELETD 238



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>MRS2L_MOUSE (Q5NCE8) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 434

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  HSTVDRDRLHWRTHNGQGLVNPETE 117
           HS+VDR +LH    NG+ L   ET+
Sbjct: 214 HSSVDRSKLHVLLQNGKSLSELETD 238



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>MRS2L_MACFA (Q4R4M1) Magnesium transporter MRS2L, mitochondrial precursor|
           (MRS2-like protein)
          Length = 408

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  HSTVDRDRLHWRTHNGQGLVNPETE 117
           HS+VDR +LH    NG+ L   ET+
Sbjct: 223 HSSVDRSKLHILLQNGKSLSELETD 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,387,175
Number of Sequences: 219361
Number of extensions: 188128
Number of successful extensions: 618
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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