>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete
              sequence
          Length = 199838

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 333    attttggaatatggaagaaaaga 355
              |||||||||||||||||||||||
Sbjct: 140521 attttggaatatggaagaaaaga 140499

>ref|NM_190587.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1395

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 488 caaattcaggtgatttggatat 509
           ||||||||||||||||||||||
Sbjct: 341 caaattcaggtgatttggatat 362

>ref|XM_722938.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07214)
           partial mRNA
          Length = 1146

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 564 tattattcaatgataataataa 585
           ||||||||||||||||||||||
Sbjct: 70  tattattcaatgataataataa 49

>emb|CR361556.8| Zebrafish DNA sequence from clone DKEY-97G1 in linkage group 24,
             complete sequence
          Length = 106934

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 561   tattattattcaatgataataataaa 586
             ||||||||| ||||||||||||||||
Sbjct: 26896 tattattatacaatgataataataaa 26921

>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
              sequence
          Length = 250078

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 313    attaaatgtacataaatataat 334
              ||||||||||||||||||||||
Sbjct: 245392 attaaatgtacataaatataat 245371

>emb|BX649389.12| Zebrafish DNA sequence from clone DKEY-28D3 in linkage group 1,
             complete sequence
          Length = 110743

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 556   atcaatattattattcaatgataataataa 585
             |||| |||||||||||||| ||||||||||
Sbjct: 93047 atcattattattattcaataataataataa 93076

>gb|AC093876.3| Homo sapiens BAC clone RP11-631I21 from 4, complete sequence
          Length = 183972

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 567   tattcaatgataataataaagg 588
             ||||||||||||||||||||||
Sbjct: 77175 tattcaatgataataataaagg 77196

>gb|AC079857.5| Homo sapiens BAC clone RP11-589E1 from 4, complete sequence
          Length = 186219

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 561    tattattattcaatgataataa 582
              ||||||||||||||||||||||
Sbjct: 148849 tattattattcaatgataataa 148870

>emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 in linkage group 5,
             complete sequence
          Length = 165851

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 545   cctatattatgatcaatattattatt 570
             |||||||||| |||||||||||||||
Sbjct: 66948 cctatattattatcaatattattatt 66973

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 488      caaattcaggtgatttggatat 509
                ||||||||||||||||||||||
Sbjct: 36348654 caaattcaggtgatttggatat 36348675

>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence
          Length = 181804

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 561   tattattattcaatgataataataaa 586
             ||||||||||||||||||| ||||||
Sbjct: 80480 tattattattcaatgataaaaataaa 80505

>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446B05
          Length = 149145

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 488   caaattcaggtgatttggatat 509
             ||||||||||||||||||||||
Sbjct: 98531 caaattcaggtgatttggatat 98552

>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           clone:P0005H10
          Length = 142885

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 488 caaattcaggtgatttggatat 509
           ||||||||||||||||||||||
Sbjct: 493 caaattcaggtgatttggatat 514

>emb|BX294103.11| Zebrafish DNA sequence from clone CH211-257A8 in linkage group 9,
              complete sequence
          Length = 193969

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 548    atattatgatcaatattattat 569
              ||||||||||||||||||||||
Sbjct: 193075 atattatgatcaatattattat 193054

>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete
             sequence
          Length = 252420

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 329   tataattttggaatatggaagaaaa 353
             ||||||||| |||||||||||||||
Sbjct: 17674 tataattttcgaatatggaagaaaa 17650

>ref|XM_421595.1| PREDICTED: Gallus gallus similar to cadherin-related 23 protein
             (LOC423718), mRNA
          Length = 16824

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 447   ctcttcattatcaacaatagg 467
             |||||||||||||||||||||
Sbjct: 12691 ctcttcattatcaacaatagg 12711

>gb|AC159879.2| Mus musculus BAC clone RP24-497H22 from chromosome 12, complete
             sequence
          Length = 201836

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   ctcttcattatcaacaatagg 467
             |||||||||||||||||||||
Sbjct: 88580 ctcttcattatcaacaatagg 88560

>emb|CR786572.20| Zebrafish DNA sequence from clone DKEY-258F14 in linkage group 8,
             complete sequence
          Length = 137717

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   attattattcaatgataataa 582
             |||||||||||||||||||||
Sbjct: 74184 attattattcaatgataataa 74204



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  attattattcaatgataataa 582
            |||||||||||||||||||||
Sbjct: 5227 attattattcaatgataataa 5247

>gb|AC122215.4| Mus musculus BAC clone RP23-106M18 from 16, complete sequence
          Length = 195086

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 561    tattattattcaatgataata 581
              |||||||||||||||||||||
Sbjct: 170010 tattattattcaatgataata 170030

>gb|AC131738.3| Mus musculus BAC clone RP23-94E15 from 16, complete sequence
          Length = 199386

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 561    tattattattcaatgataata 581
              |||||||||||||||||||||
Sbjct: 163221 tattattattcaatgataata 163201

>ref|XM_723828.1| Plasmodium yoelii yoelii str. 17XNL vacuolar protein sorting homolog
            r-vps33a (PY01196) partial mRNA
          Length = 3633

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 549  tattatgatcaatattattat 569
            |||||||||||||||||||||
Sbjct: 3301 tattatgatcaatattattat 3281

>gb|AC092039.2| Homo sapiens chromosome 3 clone RP11-114P15, complete sequence
          Length = 166560

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 324    ataaatataattttggaatat 344
              |||||||||||||||||||||
Sbjct: 128350 ataaatataattttggaatat 128370

>gb|AC163760.3| Pan troglodytes BAC clone CH251-180O13 from chromosome unknown, complete
              sequence
          Length = 174147

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 313    attaaatgtacataaatataatttt 337
              |||||||||| ||||||||||||||
Sbjct: 143918 attaaatgtaaataaatataatttt 143942

>gb|AC154706.2| Mus musculus BAC clone RP23-132D23 from chromosome 14, complete
             sequence
          Length = 215330

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 209   tcttctaattatatttgcttc 229
             |||||||||||||||||||||
Sbjct: 35799 tcttctaattatatttgcttc 35779

>gb|AC160973.4| Mus musculus BAC clone RP24-171J16 from chromosome 6, complete sequence
          Length = 159284

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 669   attattttgatatactacacttaaa 693
             ||||||||||||||| |||||||||
Sbjct: 24551 attattttgatatacaacacttaaa 24527

>gb|AC154651.2| Mus musculus BAC clone RP24-261K2 from chromosome 9, complete
            sequence
          Length = 173354

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 557  tcaatattattattcaatgataataataa 585
            |||||||||||||| ||||| ||||||||
Sbjct: 1034 tcaatattattattaaatgaaaataataa 1062

>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete
             sequence
          Length = 180530

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 559   aatattattattcaatgataa 579
             |||||||||||||||||||||
Sbjct: 84261 aatattattattcaatgataa 84241

>emb|BX571795.3| Mouse DNA sequence from clone RP23-115H22 on chromosome X, complete
             sequence
          Length = 68311

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 552   tatgatcaatattattattca 572
             |||||||||||||||||||||
Sbjct: 33604 tatgatcaatattattattca 33584

>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   aaatgtacataaatataattt 336
             |||||||||||||||||||||
Sbjct: 62510 aaatgtacataaatataattt 62490

>gb|AC153417.1| Mus musculus BAC clone RP24-169H4 from 9, complete sequence
          Length = 175520

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 557   tcaatattattattcaatgataataataa 585
             |||||||||||||| ||||| ||||||||
Sbjct: 20699 tcaatattattattaaatgaaaataataa 20671

>gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complete sequence
          Length = 150109

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 669   attattttgatatactacacttaaa 693
             ||||||||||||||| |||||||||
Sbjct: 51550 attattttgatatacaacacttaaa 51574

>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete
              sequence
          Length = 174286

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 209    tcttctaattatatttgcttc 229
              |||||||||||||||||||||
Sbjct: 170209 tcttctaattatatttgcttc 170189

>emb|AL355839.4|CNS05TCU Human chromosome 14 DNA sequence BAC R-243J8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159792

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 330   ataattttggaatatggaaga 350
             |||||||||||||||||||||
Sbjct: 43694 ataattttggaatatggaaga 43674


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,193,320
Number of Sequences: 3902068
Number of extensions: 10193320
Number of successful extensions: 273237
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 272978
Number of HSP's gapped (non-prelim): 259
length of query: 742
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 719
effective length of database: 17,143,297,704
effective search space: 12326031049176
effective search space used: 12326031049176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)