ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal31c17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 426 bits (215), Expect = e-116 Identities = 256/271 (94%) Strand = Plus / Minus Query: 9 catatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgttggta 68 |||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| Sbjct: 684 catatacatagccaccgatagcattctcatacgagcatgctttctcgagccatgttggta 625 Query: 69 catgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 624 catgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaaggaa 565 Query: 129 aacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgt 188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 564 aacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatatggcctgtcgt 505 Query: 189 cagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcgatnaag 248 |||||||||| |||||||||||||||| |||||| ||||||||||||||||| ||| Sbjct: 504 gagtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaag 445 Query: 249 ctgacgcactgcacctgacgcatgttgtcga 279 ||||||||||||||||||||||||||||||| Sbjct: 444 ctgacgcactgcacctgacgcatgttgtcga 414
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 426 bits (215), Expect = e-116 Identities = 259/275 (94%) Strand = Plus / Minus Query: 5 cgtgcatatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgtt 64 |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 809 cgtgcatatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgtt 750 Query: 65 ggtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaa 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 749 ggtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggacaa 690 Query: 125 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggccca 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 689 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgcggcccg 630 Query: 185 tcgtcagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcgat 244 | || |||||||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 629 tggtgagtgagctgtttatgccttgccggactcctcgcagcccggtggcttgaaggcgat 570 Query: 245 naagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||||||||| ||||||||||||| Sbjct: 569 gaagctgacgcactgcacctggcgcatgttgtcga 535
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 408 bits (206), Expect = e-111 Identities = 247/262 (94%) Strand = Plus / Minus Query: 5 cgtgcatatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgtt 64 |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 262 cgtgcatatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgtt 203 Query: 65 ggtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaa 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 cgtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaa 143 Query: 125 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggccca 184 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatatggcctg 83 Query: 185 tcgtcagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcgat 244 |||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||| Sbjct: 82 tcgtgagtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggcgat 23 Query: 245 naagctgacgcactgcacctga 266 ||||||||||||||||||||| Sbjct: 22 gaagctgacgcactgcacctga 1
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 396 bits (200), Expect = e-107 Identities = 258/276 (93%), Gaps = 2/276 (0%) Strand = Plus / Minus Query: 5 cgtgcatatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgtt 64 |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 769 cgtgcatatacatagccaccgatagcattcacatacgagcatgctttctcgagccatgtt 710 Query: 65 ggtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaa 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 ggtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaa 650 Query: 125 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcac-tttatatgtggccc 183 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 649 ggaaaacccaaagcaatgtcagagttgacaaaactgcaatggcacttttatat-aggcct 591 Query: 184 atcgtcagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcga 243 |||| |||||||||| |||||||||||||||| |||||| ||||||||| |||||| Sbjct: 590 gtcgtgagtgagctgtttaggccttgccggactcctcgcagcccggtggcttggaggcga 531 Query: 244 tnaagctgacgcactgcacctgacgcatgttgtcga 279 | ||||||||| |||||||||||||||||||||||| Sbjct: 530 tgaagctgacggactgcacctgacgcatgttgtcga 495
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 392 bits (198), Expect = e-106 Identities = 254/274 (92%) Strand = Plus / Minus Query: 6 gtgcatatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgttg 65 ||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||||| Sbjct: 536 gtgcatatacatagccaccgattgcattcacatacgagcacgctttctcgagccatgttg 477 Query: 66 gtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaag 125 ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 476 ttacatgaacatggacatacacatattcttaggaacaagtaagaaagacaaatggagaag 417 Query: 126 gaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccat 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 416 gaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccgt 357 Query: 186 cgtcagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcgatn 245 || |||||||||| |||||||||||||||| |||||| |||||||||||||| || Sbjct: 356 ggtgagtgagctgtttaggccttgccggactcctcgcagcccggtggcttgaaggcaatg 297 Query: 246 aagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||||||||| ||||||||||||| Sbjct: 296 aagctgacgcactgcacctggcgcatgttgtcga 263
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 283 bits (143), Expect = 1e-73 Identities = 249/274 (90%), Gaps = 10/274 (3%) Strand = Plus / Minus Query: 6 gtgcatatacatagccaccgacagcattcacatacaagcatgttttctcgagccatgttg 65 ||||||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||| Sbjct: 732 gtgcatatacatagccaccgatagcattcacatacgagcatgctttctcgagc-atgttg 674 Query: 66 gtacatgaacatggacatacacatattcttaggaacaaataagaaagataaatggagaag 125 |||||||||||||| |||||| ||| |||||||||| |||||||||||| |||||||| Sbjct: 673 gtacatgaacatgggactacacacatt-ttaggaacaa-taagaaagataa-tggagaag 617 Query: 126 gaaaacccaaagcaatgtcagagttgacaaaactgcaatggcactttatatgtggcccat 185 ||||||| ||||| |||||||||||||||| |||||||||||||| ||||||| ||||| Sbjct: 616 gaaaacc--aagca-tgtcagagttgacaaa-ctgcaatggcactt-atatgtg-cccat 563 Query: 186 cgtcagtgagctgtggnngccttgccggactcctngcagcctggtggcttgaaggcgatn 245 |||||||||||||| |||||||| ||||||| |||||||||||||||||| ||||| Sbjct: 562 cgtcagtgagctgtttatgccttgcccgactcctggcagcctggtggcttgaaagcgatg 503 Query: 246 aagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||||||||||||||||||||||| Sbjct: 502 aagctgacgcactgcacctgacgcatgttgtcga 469
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 131 bits (66), Expect = 1e-27 Identities = 73/76 (96%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676 Query: 264 tgacgcatgttgtcga 279 |||||||||||||||| Sbjct: 675 tgacgcatgttgtcga 660
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 123 bits (62), Expect = 3e-25 Identities = 72/76 (94%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590 Query: 264 tgacgcatgttgtcga 279 || ||||||||||||| Sbjct: 589 tggcgcatgttgtcga 574
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 107 bits (54), Expect = 2e-20 Identities = 61/64 (95%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531 Query: 276 tcga 279 |||| Sbjct: 530 tcga 527
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 107 bits (54), Expect = 2e-20 Identities = 70/76 (92%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||||||| Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566 Query: 264 tgacgcatgttgtcga 279 || |||| |||||||| Sbjct: 565 tggcgcaggttgtcga 550
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 103 bits (52), Expect = 3e-19 Identities = 65/70 (92%) Strand = Plus / Minus Query: 210 ccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgc 269 ||||| |||| |||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526 Query: 270 atgttgtcga 279 |||||||||| Sbjct: 525 atgttgtcga 516
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 101 bits (51), Expect = 1e-18 Identities = 69/76 (90%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 ||||||||||| |||| ||||| ||||||| ||||||| || |||||||||||||||||| Sbjct: 591 gccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcactgcacc 532 Query: 264 tgacgcatgttgtcga 279 || ||||||||||||| Sbjct: 531 tggcgcatgttgtcga 516
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 99.6 bits (50), Expect = 5e-18 Identities = 60/64 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534 Query: 276 tcga 279 |||| Sbjct: 533 tcga 530
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 99.6 bits (50), Expect = 5e-18 Identities = 60/64 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528 Query: 276 tcga 279 |||| Sbjct: 527 tcga 524
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 99.6 bits (50), Expect = 5e-18 Identities = 60/64 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 99.6 bits (50), Expect = 5e-18 Identities = 60/64 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||||||||| |||||||| |||||||||||||| |||||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 99.6 bits (50), Expect = 5e-18 Identities = 69/76 (90%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| ||| || |||||| |||||||||| |||||||||||||||||| Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455 Query: 264 tgacgcatgttgtcga 279 || |||| |||||||| Sbjct: 454 tggcgcaggttgtcga 439
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 99.6 bits (50), Expect = 5e-18 Identities = 60/64 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 99.6 bits (50), Expect = 5e-18 Identities = 69/76 (90%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 ||||||||||| |||| ||||||||||||| ||||||| || ||||||||||| |||||| Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522 Query: 264 tgacgcatgttgtcga 279 || ||||||||||||| Sbjct: 521 tggcgcatgttgtcga 506
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 99.6 bits (50), Expect = 5e-18 Identities = 69/76 (90%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| ||| || |||||| |||||||||| |||||||||||||||||| Sbjct: 1505 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 1446 Query: 264 tgacgcatgttgtcga 279 || |||| |||||||| Sbjct: 1445 tggcgcaggttgtcga 1430
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 95.6 bits (48), Expect = 7e-17 Identities = 56/59 (94%) Strand = Plus / Minus Query: 221 gcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 492 gcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcga 434
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 56/60 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 56/60 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 56/60 (93%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 91.7 bits (46), Expect = 1e-15 Identities = 59/64 (92%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 91.7 bits (46), Expect = 1e-15 Identities = 68/76 (89%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| ||| || |||||| |||| ||||| |||||||||||||||||| Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575 Query: 264 tgacgcatgttgtcga 279 || |||| |||||||| Sbjct: 574 tggcgcaggttgtcga 559
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 87.7 bits (44), Expect = 2e-14 Identities = 63/70 (90%) Strand = Plus / Minus Query: 210 ccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgc 269 ||||| |||| |||||| ||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560 Query: 270 atgttgtcga 279 |||||||||| Sbjct: 559 atgttgtcga 550
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 87.7 bits (44), Expect = 2e-14 Identities = 63/70 (90%) Strand = Plus / Minus Query: 210 ccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgc 269 ||||| |||| |||||||||||||||||| ||||| ||||||||||||||||| || || Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533 Query: 270 atgttgtcga 279 |||||||||| Sbjct: 532 atgttgtcga 523
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 87.7 bits (44), Expect = 2e-14 Identities = 57/62 (91%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||||||||||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 276 tc 277 || Sbjct: 437 tc 436
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| || |||||||||||||| ||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| |||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 276 tcga 279 |||| Sbjct: 437 tcga 434
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713 Query: 276 tcga 279 |||| Sbjct: 712 tcga 709
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 83.8 bits (42), Expect = 3e-13 Identities = 58/64 (90%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || ||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725 Query: 276 tcga 279 |||| Sbjct: 724 tcga 721
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 83.8 bits (42), Expect = 3e-13 Identities = 67/76 (88%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||| ||||||| ||| || |||||| |||| ||||| |||||||||||||||||| Sbjct: 1259 gccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 1200 Query: 264 tgacgcatgttgtcga 279 || |||| |||||||| Sbjct: 1199 tggcgcaggttgtcga 1184 Score = 50.1 bits (25), Expect = 0.004 Identities = 39/44 (88%) Strand = Plus / Minus Query: 236 gaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 ||||| ||| ||||||||||||| |||||| |||| |||||||| Sbjct: 4288 gaaggtgatgaagctgacgcactacacctggcgcaggttgtcga 4245
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 83.8 bits (42), Expect = 3e-13 Identities = 67/76 (88%) Strand = Plus / Minus Query: 204 gccttgccggactcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacc 263 |||||||||||||||| ||| || |||||| ||||||| || |||||||||||||||||| Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922 Query: 264 tgacgcatgttgtcga 279 || || | |||||||| Sbjct: 921 tggcgtaggttgtcga 906
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 79.8 bits (40), Expect = 4e-12 Identities = 51/55 (92%) Strand = Plus / Minus Query: 225 cctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 ||||||||| |||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 595 cctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 541
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 276 tcga 279 |||| Sbjct: 721 tcga 718
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 276 tcga 279 |||| Sbjct: 727 tcga 724
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 276 tcga 279 |||| Sbjct: 727 tcga 724
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 276 tcga 279 |||| Sbjct: 721 tcga 718
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669 Query: 276 tcga 279 |||| Sbjct: 668 tcga 665
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 276 tcga 279 |||| Sbjct: 732 tcga 729
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 276 tcga 279 |||| Sbjct: 732 tcga 729
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 276 tcga 279 |||| Sbjct: 727 tcga 724
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| | |||||||| |||||||||||||||||||| |||| |||| Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548 Query: 276 tcga 279 |||| Sbjct: 547 tcga 544
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| | |||||||| ||||||||||||||||||||||||| |||| Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552 Query: 276 tcga 279 |||| Sbjct: 551 tcga 548
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||||| |||||||||||||||||||| |||| |||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 276 tcga 279 |||| Sbjct: 545 tcga 542
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| || ||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 75.8 bits (38), Expect = 7e-11 Identities = 57/64 (89%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| ||||||||| |||||||||| || ||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 276 tcga 279 |||| Sbjct: 544 tcga 541
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 73.8 bits (37), Expect = 3e-10 Identities = 48/52 (92%) Strand = Plus / Minus Query: 228 ggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| |||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 777 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 726
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 73.8 bits (37), Expect = 3e-10 Identities = 48/52 (92%) Strand = Plus / Minus Query: 228 ggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| |||||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 776 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 725
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 67.9 bits (34), Expect = 2e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| | |||||||| |||||||||||||||||||| |||| |||| Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 276 tcga 279 |||| Sbjct: 727 tcga 724
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 67.9 bits (34), Expect = 2e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| | |||||||| |||||||||||||||||||| |||| |||| Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532 Query: 276 tcga 279 |||| Sbjct: 531 tcga 528
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 63.9 bits (32), Expect = 3e-07 Identities = 54/62 (87%) Strand = Plus / Minus Query: 216 tcctngcagcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttg 275 |||| ||| || |||||| |||||||| | |||||||||||||||||||| |||| |||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545 Query: 276 tc 277 || Sbjct: 544 tc 543
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 61.9 bits (31), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 238 aggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 ||||||| |||||||||||||||||||| |||| |||||||| Sbjct: 765 aggcgatgaagctgacgcactgcacctggcgcaggttgtcga 724
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 60.0 bits (30), Expect = 4e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| ||||||| ||||||||||||||||| ||||| | |||||||| Sbjct: 581 ggcttgtaggcgatgaagctgacgcactgcacttgacggacgttgtcga 533
>gb|AC113171.3| Homo sapiens chromosome 3 clone RP11-696A14, complete sequence Length = 183599 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 101 caaataagaaagataaatggagaaggaaaa 130 ||||||||||||| |||||||||||||||| Sbjct: 97466 caaataagaaagaaaaatggagaaggaaaa 97437
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 50.1 bits (25), Expect = 0.004 Identities = 45/52 (86%) Strand = Plus / Minus Query: 228 ggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||| || || |||| ||||||||| ||||| | |||||||| Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcga 525
>emb|X60000.1|PVRBCOS P.vulgaris rbcS mRNA for small subunit of ribulose bisphosphate carboxylase/oxygenase (clone pPvSS191) Length = 849 Score = 48.1 bits (24), Expect = 0.015 Identities = 47/55 (85%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtc 277 |||||||||||||| |||| || || |||| ||||||||| ||||| | |||||| Sbjct: 576 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtc 522
>emb|X59999.1|PVRBCS P.vulgaris rbcS mRNA for small subunit of ribulose bisphosphate carboxylase/oxygenase (clone pPvSS965) Length = 591 Score = 48.1 bits (24), Expect = 0.015 Identities = 47/55 (85%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtc 277 |||||||||||||| |||| || || |||| ||||||||| ||||| | |||||| Sbjct: 404 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtc 350
>emb|X57022.1|PVSS15BCO P. vulgaris rbcS cDNA (with intronic sequences) for small subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase Length = 1071 Score = 48.1 bits (24), Expect = 0.015 Identities = 47/55 (85%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtc 277 |||||||||||||| |||| || || |||| ||||||||| ||||| | |||||| Sbjct: 785 agcctggtggcttgtaggcaatgaaactgatgcactgcacttgacgaacgttgtc 731
>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12, complete sequence Length = 155592 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Minus Query: 66 gtacatgaacatggacatacaca 88 ||||||||||||||||||||||| Sbjct: 152158 gtacatgaacatggacatacaca 152136
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 46.1 bits (23), Expect = 0.059 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgc 260 |||||| ||||||| ||||||||||||||| Sbjct: 1147 ggcttgtaggcgatgaagctgacgcactgc 1118
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 46.1 bits (23), Expect = 0.059 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgc 260 |||||| ||||||| ||||||||||||||| Sbjct: 810 ggcttgtaggcgatgaagctgacgcactgc 781
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 46.1 bits (23), Expect = 0.059 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgc 260 |||||| ||||||| ||||||||||||||| Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgc 533
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 46.1 bits (23), Expect = 0.059 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgc 260 |||||| ||||||| ||||||||||||||| Sbjct: 682 ggcttgtaggcgatgaagctgacgcactgc 653
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 46.1 bits (23), Expect = 0.059 Identities = 28/30 (93%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgc 260 |||||| ||||||| ||||||||||||||| Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgc 533
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 44.1 bits (22), Expect = 0.23 Identities = 48/57 (84%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||| |||| || || |||| |||||| || ||||| ||||||||| Sbjct: 564 agcctggtggcttgtaggcaatgaaactgatgcactgaacttgacgtttgttgtcga 508
>ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2 (Ugt3a2), mRNA Length = 2197 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
>gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2, transcript variant 1, mRNA (cDNA clone MGC:37820 IMAGE:5098754), complete cds Length = 2196 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
>gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, polypeptide A2, transcript variant 1, mRNA (cDNA clone MGC:37957 IMAGE:5134131), complete cds Length = 2192 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 849 aaaatccaaagcaaagtcagagttgacaaa 820
>dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430112M20 product:Hypothetical protein (Hypothetical UDP-glucoronosyl and UDP-glucosyl transferase containing protein), full insert sequence Length = 2284 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 883 aaaatccaaagcaaagtcagagttgacaaa 854
>dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630011D02 product:HYPOTHETICAL 59.7 KDA PROTEIN [Mus musculus]; weakly similar to UDP-Glycosyltransferase/glycogen phosphorylase, full insert sequence Length = 1723 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 878 aaaatccaaagcaaagtcagagttgacaaa 849
>dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730018P11 product:hypothetical UDP-glucoronosyl and UDP-glucosyl transferase containing protein, full insert sequence Length = 2197 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 869 aaaatccaaagcaaagtcagagttgacaaa 840
>dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530069C13 product:hypothetical UDP-Glycosyltransferase/glycogen phosphorylase structure containing protein, full insert sequence Length = 1353 Score = 44.1 bits (22), Expect = 0.23 Identities = 28/30 (93%) Strand = Plus / Minus Query: 127 aaaacccaaagcaatgtcagagttgacaaa 156 |||| ||||||||| ||||||||||||||| Sbjct: 853 aaaatccaaagcaaagtcagagttgacaaa 824
>emb|X53426.1|NSRUBSSU Nicotiana sylvestris NySS41 and partial NySS42 genes for RUBISCO small subunit (SSU) Length = 2795 Score = 44.1 bits (22), Expect = 0.23 Identities = 42/49 (85%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| ||||||| || |||| ||| ||||| |||| ||||||||||| Sbjct: 2140 ggcttgtaggcgatgaaactgatgcattgcacttgacacatgttgtcga 2092
>emb|X03820.1|PERBCS08 Petunia x hybrida rbcS gene (ssu8) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2242 Score = 44.1 bits (22), Expect = 0.23 Identities = 48/57 (84%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||| |||| || || |||| ||| ||||| ||||| | |||||||| Sbjct: 1892 agcctggtggcttgtaggcaatgaaactgatgcattgcacttgacggacgttgtcga 1836
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 44.1 bits (22), Expect = 0.23 Identities = 42/49 (85%) Strand = Plus / Minus Query: 231 ggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||| ||||||| || |||| |||||||||||| || ||||||||| Sbjct: 598 ggcttgtaggcgatgaaactgatgcactgcacctggcggttgttgtcga 550
>gb|M29643.1|PETRBCC Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 41), partial cds Length = 251 Score = 44.1 bits (22), Expect = 0.23 Identities = 48/57 (84%) Strand = Plus / Minus Query: 223 agcctggtggcttgaaggcgatnaagctgacgcactgcacctgacgcatgttgtcga 279 |||||||||||||| |||| || || |||| ||| ||||| ||||| | |||||||| Sbjct: 136 agcctggtggcttgtaggcaatgaaactgatgcattgcacttgacggacgttgtcga 80
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence Length = 141653 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 attcttaggaacaaataagaaagat 114 ||||||||||||||| ||||||||| Sbjct: 131901 attcttaggaacaaaaaagaaagat 131877
>emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 on chromosome 10 Contains the ZNF37B pseudogene for zinc finger protein 37b (KOX 21), a eukaryotic translation initiation factor 3 subunit 6 interacting protein (EIF3S6IP) pseudogene, the 3' end of the ZNF11B gene for zinc finger protein 11b (KOX 2), a novel gene (FLJ23327) and two CpG Islands, complete sequence Length = 146328 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 agcaatgtcagagttgacaaa 156 ||||||||||||||||||||| Sbjct: 137861 agcaatgtcagagttgacaaa 137841
>gb|AC153916.2| Mus musculus 6 BAC RP23-93D20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221540 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 90 attcttaggaacaaataagaaagat 114 ||||||||||||||| ||||||||| Sbjct: 193767 attcttaggaacaaaaaagaaagat 193791
>gb|L11243.1|RATRSKM2X Rat skeletal muscle voltage-sensitive sodium channel subtype 2 (rSkM2) gene Length = 2825 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 atgaacatggacatacacata 90 ||||||||||||||||||||| Sbjct: 1420 atgaacatggacatacacata 1400
>gb|AC170993.2| Mus musculus chromosome 1, clone wi1-2059I11, complete sequence Length = 41406 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 gtacatgaacatggacatacacatattc 93 ||||||||||||| ||||| |||||||| Sbjct: 12032 gtacatgaacatgtacatatacatattc 12005
>gb|AC169498.2| Mus musculus chromosome 1, clone wi1-807J5, complete sequence Length = 45765 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 gtacatgaacatggacatacacatattc 93 ||||||||||||| ||||| |||||||| Sbjct: 41180 gtacatgaacatgtacatatacatattc 41153
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaacccaaagcaatgtcaga 147 |||||||||||||||||||| Sbjct: 1130897 aaacccaaagcaatgtcaga 1130916
>gb|AC145381.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024K17 map near S16403, complete sequence Length = 172238 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 4895 acatgaacatgaacatacacatat 4872
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 123589 acatgaacatgaacatacacatat 123566
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 24888607 acatgaacatgaacatacacatat 24888584
>gb|AC113454.8| Mus musculus chromosome 3, clone RP24-176I19, complete sequence Length = 171480 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaataagaaagataaatgga 121 |||||||||||||||||||| Sbjct: 75761 aaataagaaagataaatgga 75742
>ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 protein phosphatase (CNI04270) partial mRNA Length = 3071 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 aaacccaaagcaatgtcaga 147 |||||||||||||||||||| Sbjct: 80 aaacccaaagcaatgtcaga 99
>emb|AL513485.10| Human DNA sequence from clone RP11-48O20 on chromosome 1 Contains the TAGLN2 gene for transgelin 2, the IGSF9 gene for immunoglobulin superfamily member 9, the SLAMF9 gene for SLAM family member 9, a novel gene and three CpG islands, complete sequence Length = 80398 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 aaagataaatggagaaggaa 128 |||||||||||||||||||| Sbjct: 46055 aaagataaatggagaaggaa 46074
>emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on chromosome 6, complete sequence Length = 175757 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 aaaactgcaatggcacttta 173 |||||||||||||||||||| Sbjct: 166594 aaaactgcaatggcacttta 166575
>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila), complete sequence Length = 134011 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 cagagttgacaaaactgcaatggc 167 |||||||||||||||| ||||||| Sbjct: 88758 cagagttgacaaaactacaatggc 88735
>gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151302 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 acacatattcttaggaacaaataagaaa 111 |||||||||||||| |||||| |||||| Sbjct: 9178 acacatattcttagtaacaaaaaagaaa 9151
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gaacaaataagaaagataaa 117 |||||||||||||||||||| Sbjct: 45388 gaacaaataagaaagataaa 45407
>gb|AC163014.5| Mus musculus chromosome 8, clone RP23-216D14, complete sequence Length = 208407 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aagataaatggagaaggaaa 129 |||||||||||||||||||| Sbjct: 190875 aagataaatggagaaggaaa 190894
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence Length = 139476 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 atgaacatggacatacacatattc 93 |||||||||| ||||||||||||| Sbjct: 31202 atgaacatgggcatacacatattc 31225
>dbj|AK054537.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330038M22 product:unclassifiable, full insert sequence Length = 3845 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 gtacatgaacatggacatacacatattc 93 ||||||||||||| ||||| |||||||| Sbjct: 695 gtacatgaacatgtacatatacatattc 722
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.6 Identities = 36/42 (85%) Strand = Plus / Minus Query: 209 gccggactcctngcagcctggtggcttgaaggcgatnaagct 250 ||||||||||| ||| || || |||||| ||||||| ||||| Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276924 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gataaatggagaaggaaaac 131 |||||||||||||||||||| Sbjct: 4847879 gataaatggagaaggaaaac 4847860
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 11682609 acatgaacatgaacatacacatat 11682586 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 10428734 acatgaacatgaacatacacatat 10428757
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 24979677 acatgaacatgaacatacacatat 24979654
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 agaaggaaaacccaaagcaa 140 |||||||||||||||||||| Sbjct: 1491873 agaaggaaaacccaaagcaa 1491854
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 5348 acatgaacatgaacatacacatat 5371
>dbj|AP004583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005N06 Length = 140639 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 acatgaacatggacatacacatat 91 ||||||||||| |||||||||||| Sbjct: 31151 acatgaacatgaacatacacatat 31128
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gataaatggagaaggaaaac 131 |||||||||||||||||||| Sbjct: 90543 gataaatggagaaggaaaac 90562
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 agaaggaaaacccaaagcaa 140 |||||||||||||||||||| Sbjct: 55294 agaaggaaaacccaaagcaa 55275
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 40.1 bits (20), Expect = 3.6 Identities = 36/42 (85%) Strand = Plus / Minus Query: 209 gccggactcctngcagcctggtggcttgaaggcgatnaagct 250 ||||||||||| ||| || || |||||| ||||||| ||||| Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 546
>gb|AC108915.12| Mus musculus chromosome 8, clone RP23-444O13, complete sequence Length = 178228 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 aagataaatggagaaggaaa 129 |||||||||||||||||||| Sbjct: 104567 aagataaatggagaaggaaa 104586
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.6 Identities = 36/42 (85%) Strand = Plus / Minus Query: 209 gccggactcctngcagcctggtggcttgaaggcgatnaagct 250 ||||||||||| ||| || || |||||| ||||||| ||||| Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 11276595 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gataaatggagaaggaaaac 131 |||||||||||||||||||| Sbjct: 4847860 gataaatggagaaggaaaac 4847841
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 40.1 bits (20), Expect = 3.6 Identities = 36/42 (85%) Strand = Plus / Plus Query: 209 gccggactcctngcagcctggtggcttgaaggcgatnaagct 250 ||||||||||| ||| || || |||||| ||||||| ||||| Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagct 95130
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gataaatggagaaggaaaac 131 |||||||||||||||||||| Sbjct: 112081 gataaatggagaaggaaaac 112100
>emb|AL671901.14| Mouse DNA sequence from clone RP23-238B14 on chromosome X, complete sequence Length = 201821 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 atgaacatggacatacacat 89 |||||||||||||||||||| Sbjct: 17489 atgaacatggacatacacat 17470
>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence Length = 208713 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 gtacatgaacatggacatacacatattc 93 ||||||||||||| ||||| |||||||| Sbjct: 68296 gtacatgaacatgtacatatacatattc 68323
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 tgacgcactgcacctgacgcatgttgtc 277 |||||||||||||||| |||| |||||| Sbjct: 738 tgacgcactgcacctggcgcaggttgtc 711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,731,413 Number of Sequences: 3902068 Number of extensions: 2731413 Number of successful extensions: 52994 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52726 Number of HSP's gapped (non-prelim): 261 length of query: 279 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 257 effective length of database: 17,147,199,772 effective search space: 4406830341404 effective search space used: 4406830341404 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
