Clone Name	rbaal30n17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	90	1e-14
2	gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome...	90	1e-14
3	gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome...	90	1e-14
4	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	90	1e-14
5	dbj|AK101486.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	1e-14
6	dbj|AK099658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	1e-14
7	dbj|AK069243.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	1e-14
8	dbj|AK058854.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	1e-14
9	gb|AY108845.1| Zea mays PCO098014 mRNA sequence	86	2e-13
10	gb|AY109221.1| Zea mays PCO098015 mRNA sequence	82	3e-12
11	ref|NM_187478.1| Oryza sativa (japonica cultivar-group), predic...	54	6e-04
12	gb|AY689437.1| Deerpox virus W-1170-84, complete genome	44	0.59
13	gb|AY689436.1| Deerpox virus W-848-83, complete genome	44	0.59
14	gb|AC154484.2| Mus musculus BAC clone RP24-115C5 from chromosome...	44	0.59
15	gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp...	42	2.3
16	gb|AC067854.14| Homo sapiens chromosome 8, clone RP11-513H8, com...	42	2.3
17	gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8...	42	2.3
18	emb|BX649351.10| Zebrafish DNA sequence from clone CH211-168F19 ...	42	2.3
19	gb|AC133576.10| Mus musculus chromosome 19, clone RP23-204H15, c...	42	2.3
20	gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete...	40	9.2
21	gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr...	40	9.2
22	gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromo...	40	9.2
23	ref|XM_566621.1| Cryptococcus neoformans var. neoformans JEC21 i...	40	9.2
24	gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosom...	40	9.2
25	gb|AC127556.4| Mus musculus BAC clone RP24-344J6 from chromosome...	40	9.2
26	emb|CR450820.5| Zebrafish DNA sequence from clone CH211-209J18 i...	40	9.2
27	emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chr...	40	9.2
28	gb|U49945.1| Caenorhabditis elegans cosmid C02H7, complete sequence	40	9.2
29	emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chr...	40	9.2
30	emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chro...	40	9.2
31	emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chr...	40	9.2
32	emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chr...	40	9.2
33	emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on ch...	40	9.2
34	emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504...	40	9.2
35	emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in ...	40	9.2
36	emb|BX571697.3| Zebrafish DNA sequence from clone DKEY-201M8 in ...	40	9.2
37	emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chr...	40	9.2
38	emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in...	40	9.2
39	gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence	40	9.2
40	gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, comple...	40	9.2
41	gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 ...	40	9.2
42	gb|AE015451.1| Pseudomonas putida KT2440 complete genome	40	9.2
43	dbj|AP003102.2| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	9.2
44	emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on ch...	40	9.2
45	emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, c...	40	9.2
46	emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ...	40	9.2

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                           
Query: 95      tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
               |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 8868780 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 8868839

                
Query: 154     a 154
               |
Sbjct: 8868840 a 8868840



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Plus

                                                                           
Query: 182     agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
               ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 8868845 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 8868904

                                                                           
Query: 242     gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
               || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 8868905 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 8868964

                                         
Query: 302     ggtgcctcgatcaggagaaaacgcag 327
               ||||||||  |||||||||| |||||
Sbjct: 8868965 ggtgcctcagtcaggagaaagcgcag 8868990



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 556     ttgagaatttgcaagcaaatggggagc 582
               |||||| ||||||||||||||||||||
Sbjct: 8869402 ttgagagtttgcaagcaaatggggagc 8869428

---

>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02,
             complete sequence
          Length = 126027

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                         
Query: 95    tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
             |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 59668 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 59727

              
Query: 154   a 154
             |
Sbjct: 59728 a 59728



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Plus

                                                                         
Query: 182   agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
             ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 59733 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 59792

                                                                         
Query: 242   gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
             || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 59793 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 59852

                                       
Query: 302   ggtgcctcgatcaggagaaaacgcag 327
             ||||||||  |||||||||| |||||
Sbjct: 59853 ggtgcctcagtcaggagaaagcgcag 59878



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 556   ttgagaatttgcaagcaaatggggagc 582
             |||||| ||||||||||||||||||||
Sbjct: 60290 ttgagagtttgcaagcaaatggggagc 60316

---

>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02,
              complete sequence
          Length = 112265

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                          
Query: 95     tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
              |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 111933 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 111992

               
Query: 154    a 154
              |
Sbjct: 111993 a 111993



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Plus

                                                                          
Query: 182    agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
              ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 111998 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 112057

                                                                          
Query: 242    gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
              || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 112058 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 112117

                                        
Query: 302    ggtgcctcgatcaggagaaaacgcag 327
              ||||||||  |||||||||| |||||
Sbjct: 112118 ggtgcctcagtcaggagaaagcgcag 112143

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                           
Query: 95      tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
               |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 8866615 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 8866674

                
Query: 154     a 154
               |
Sbjct: 8866675 a 8866675



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 116/146 (79%)
 Strand = Plus / Plus

                                                                           
Query: 182     agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
               ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 8866680 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 8866739

                                                                           
Query: 242     gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
               || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 8866740 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 8866799

                                         
Query: 302     ggtgcctcgatcaggagaaaacgcag 327
               ||||||||  |||||||||| |||||
Sbjct: 8866800 ggtgcctcagtcaggagaaagcgcag 8866825



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 556     ttgagaatttgcaagcaaatggggagc 582
               |||||| ||||||||||||||||||||
Sbjct: 8867237 ttgagagtttgcaagcaaatggggagc 8867263

---

>dbj|AK101486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041M21, full
            insert sequence
          Length = 2444

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
            |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 2381 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 2322

             
Query: 154  a 154
            |
Sbjct: 2321 a 2321



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 171/218 (78%)
 Strand = Plus / Minus

                                                                        
Query: 182  agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
            ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 2316 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 2257

                                                                        
Query: 242  gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
            || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 2256 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 2197

                                                                        
Query: 302  ggtgcctcgatcaggagaaaacgcagtaagcatattgcctttgtataccgcgacatggcc 361
            ||||||||  |||||||||| ||||| | | ||| |||||| |  ||| ||  |||||| 
Sbjct: 2196 ggtgcctcagtcaggagaaagcgcagcatggatactgccttcgagtacagcaccatggca 2137

                                                  
Query: 362  gtcgccactttccccatcatctcaacaacaccaccatg 399
            |  ||   |||||||||||||||| |||||||||||||
Sbjct: 2136 gatgctgatttccccatcatctcatcaacaccaccatg 2099



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 556  ttgagaatttgcaagcaaatggggagc 582
            |||||| ||||||||||||||||||||
Sbjct: 1942 ttgagagtttgcaagcaaatggggagc 1916

---

>dbj|AK099658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066E23, full
            insert sequence
          Length = 2563

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
            |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 2338 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 2279

             
Query: 154  a 154
            |
Sbjct: 2278 a 2278



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 171/218 (78%)
 Strand = Plus / Minus

                                                                        
Query: 182  agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
            ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 2273 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 2214

                                                                        
Query: 242  gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
            || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 2213 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 2154

                                                                        
Query: 302  ggtgcctcgatcaggagaaaacgcagtaagcatattgcctttgtataccgcgacatggcc 361
            ||||||||  |||||||||| ||||| | | ||| |||||| |  ||| ||  |||||| 
Sbjct: 2153 ggtgcctcagtcaggagaaagcgcagcatggatactgccttcgagtacagcaccatggca 2094

                                                  
Query: 362  gtcgccactttccccatcatctcaacaacaccaccatg 399
            |  ||   |||||||||||||||| |||||||||||||
Sbjct: 2093 gatgctgatttccccatcatctcatcaacaccaccatg 2056



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 556  ttgagaatttgcaagcaaatggggagc 582
            |||||| ||||||||||||||||||||
Sbjct: 1899 ttgagagtttgcaagcaaatggggagc 1873

---

>dbj|AK069243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010P21, full
            insert sequence
          Length = 2696

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                        
Query: 95   tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
            |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 2375 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 2316

             
Query: 154  a 154
            |
Sbjct: 2315 a 2315



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 171/218 (78%)
 Strand = Plus / Minus

                                                                        
Query: 182  agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
            ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 2310 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 2251

                                                                        
Query: 242  gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
            || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 2250 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 2191

                                                                        
Query: 302  ggtgcctcgatcaggagaaaacgcagtaagcatattgcctttgtataccgcgacatggcc 361
            ||||||||  |||||||||| ||||| | | ||| |||||| |  ||| ||  |||||| 
Sbjct: 2190 ggtgcctcagtcaggagaaagcgcagcatggatactgccttcgagtacagcaccatggca 2131

                                                  
Query: 362  gtcgccactttccccatcatctcaacaacaccaccatg 399
            |  ||   |||||||||||||||| |||||||||||||
Sbjct: 2130 gatgctgatttccccatcatctcatcaacaccaccatg 2093



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 556  ttgagaatttgcaagcaaatggggagc 582
            |||||| ||||||||||||||||||||
Sbjct: 1936 ttgagagtttgcaagcaaatggggagc 1910

---

>dbj|AK058854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B01, full
           insert sequence
          Length = 1007

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 58/61 (95%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                       
Query: 95  tatcttacacgccctcgtttgggccaacaaatatatgtaca-aatgaaagaatattgtac 153
           |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 782 tatcttacacgccctcgtttgggccaacgaatatatgtacaggatgaaagaatattgtac 723

            
Query: 154 a 154
           |
Sbjct: 722 a 722



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 171/218 (78%)
 Strand = Plus / Minus

                                                                       
Query: 182 agcggtcagtgactcgggcattgcaactggctgagccttgcattgagggcttcgatgtac 241
           ||||||||||| | | || |||||||| ||  |||||| || || | |||||| ||||| 
Sbjct: 717 agcggtcagtgccgctggtattgcaacgggacgagcctagcgttaacggcttcaatgtat 658

                                                                       
Query: 242 gtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggttgagggcgagcgat 301
           || ||||| ||| |||| |||  ||| || ||||||| ||  ||||| |||||||| || 
Sbjct: 657 gtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggttcagggcgagtgac 598

                                                                       
Query: 302 ggtgcctcgatcaggagaaaacgcagtaagcatattgcctttgtataccgcgacatggcc 361
           ||||||||  |||||||||| ||||| | | ||| |||||| |  ||| ||  |||||| 
Sbjct: 597 ggtgcctcagtcaggagaaagcgcagcatggatactgccttcgagtacagcaccatggca 538

                                                 
Query: 362 gtcgccactttccccatcatctcaacaacaccaccatg 399
           |  ||   |||||||||||||||| |||||||||||||
Sbjct: 537 gatgctgatttccccatcatctcatcaacaccaccatg 500



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 556 ttgagaatttgcaagcaaatggggagc 582
           |||||| ||||||||||||||||||||
Sbjct: 343 ttgagagtttgcaagcaaatggggagc 317

---

>gb|AY108845.1| Zea mays PCO098014 mRNA sequence
          Length = 572

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 49/51 (96%)
 Strand = Plus / Minus

                                                              
Query: 105 gccctcgtttgggccaacaaatatatgtacaaatgaaagaatattgtacaa 155
           ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 394 gccctagtttgggccaacaaatatatttacaaatgaaagaatattgtacaa 344



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 277 caaaggcgggttgagggcgagcgatggtgcctcgatcaggagaaaacgcag 327
           |||||| |||||||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 219 caaaggggggttgagggcgagtgatggtgcctcgaccaggagaaaccgcag 169

---

>gb|AY109221.1| Zea mays PCO098015 mRNA sequence
          Length = 786

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 422 tgaaatattatttcgaccgcgtcgggcatcgctgtagcatcaggtatctgccctacagtg 481
           |||||||| |||||||  || || |||||| ||||| |||||| |||||| || ||||||
Sbjct: 250 tgaaatatcatttcgattgcatctggcatctctgtaccatcagctatctgtcccacagtg 191

                                                    
Query: 482 cttgcaagttcttccgcatgttcaacttcagtgagaaactg 522
           || || ||||||||||||| ||||||||| | |||||||||
Sbjct: 190 ctggctagttcttccgcatattcaacttcggagagaaactg 150



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 224 ttgagggcttcgatgtacgtccgcagtcggtgtcggtcagatctagtcagggacaaaggc 283
           ||||| ||||| ||||| || || ||||| || || || ||||| ||||| | |||||| 
Sbjct: 448 ttgagagcttcaatgtatgtgcgaagtcgatgccgatcggatcttgtcagagtcaaagga 389

                                                       
Query: 284 gggttgagggcgagcgatggtgcctcgatcaggagaaaacgcag 327
           ||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 388 gggttgagggcaagtgatggtgcctcgatcaggagaaaccgcag 345



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                         
Query: 113 ttgggccaacaaatatatgtacaaatgaaagaatattgtacaagtc 158
           |||||||||||||||||| ||||||||||| ||||||| |||||||
Sbjct: 576 ttgggccaacaaatatatttacaaatgaaaaaatattgcacaagtc 531

---

>ref|NM_187478.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1887

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 135/171 (78%)
 Strand = Plus / Minus

                                                                        
Query: 229  ggcttcgatgtacgtccgcagtcggtgtcggtcagatctagtcagggacaaaggcgggtt 288
            |||||| ||||| || ||||| ||| |||| |||  ||| || ||||||| ||  |||||
Sbjct: 1845 ggcttcaatgtatgtgcgcaggcggcgtcgatcatctcttgttagggacagagcggggtt 1786

                                                                        
Query: 289  gagggcgagcgatggtgcctcgatcaggagaaaacgcagtaagcatattgcctttgtata 348
             |||||||| || ||||||||  |||||||||| ||||| | | ||| |||||| |  ||
Sbjct: 1785 cagggcgagtgacggtgcctcagtcaggagaaagcgcagcatggatactgccttcgagta 1726

                                                               
Query: 349  ccgcgacatggccgtcgccactttccccatcatctcaacaacaccaccatg 399
            | ||  |||||| |  ||   |||||||||||||||| |||||||||||||
Sbjct: 1725 cagcaccatggcagatgctgatttccccatcatctcatcaacaccaccatg 1675



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 556  ttgagaatttgcaagcaaatggggagc 582
            |||||| ||||||||||||||||||||
Sbjct: 1518 ttgagagtttgcaagcaaatggggagc 1492

---

>gb|AY689437.1| Deerpox virus W-1170-84, complete genome
          Length = 170560

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 120    aacaaatatatgtacaaatgaa 141
              ||||||||||||||||||||||
Sbjct: 119927 aacaaatatatgtacaaatgaa 119948

---

>gb|AY689436.1| Deerpox virus W-848-83, complete genome
          Length = 166259

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 120    aacaaatatatgtacaaatgaa 141
              ||||||||||||||||||||||
Sbjct: 116880 aacaaatatatgtacaaatgaa 116901

---

>gb|AC154484.2| Mus musculus BAC clone RP24-115C5 from chromosome 14, complete sequence
          Length = 193855

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 474   ctacagtgcttgcaagttcttc 495
             ||||||||||||||||||||||
Sbjct: 41220 ctacagtgcttgcaagttcttc 41199

---

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 179     ggcagcggtcagtgactcgggcattgcaa 207
               ||||||||||||||||| |||||| ||||
Sbjct: 4559140 ggcagcggtcagtgacttgggcatggcaa 4559168

---

>gb|AC067854.14| Homo sapiens chromosome 8, clone RP11-513H8, complete sequence
          Length = 203982

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    aaatatatgtacaaatgaaag 143
              |||||||||||||||||||||
Sbjct: 127638 aaatatatgtacaaatgaaag 127618

---

>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence
          Length = 182988

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 123    aaatatatgtacaaatgaaag 143
              |||||||||||||||||||||
Sbjct: 174432 aaatatatgtacaaatgaaag 174452

---

>emb|BX649351.10| Zebrafish DNA sequence from clone CH211-168F19 in linkage group 4,
              complete sequence
          Length = 144569

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    aaatatatgtacaaatgaaag 143
              |||||||||||||||||||||
Sbjct: 109852 aaatatatgtacaaatgaaag 109832

---

>gb|AC133576.10| Mus musculus chromosome 19, clone RP23-204H15, complete sequence
          Length = 213096

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 125    atatatgtacaaatgaaagaa 145
              |||||||||||||||||||||
Sbjct: 120905 atatatgtacaaatgaaagaa 120925

---

>gb|AC011697.9| Drosophila melanogaster clone BACR12J05, complete sequence
          Length = 203498

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    cgcatatgaattgcatatgt 662
              ||||||||||||||||||||
Sbjct: 160760 cgcatatgaattgcatatgt 160779

---

>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 212    ctgagccttgcattgagggc 231
              ||||||||||||||||||||
Sbjct: 598258 ctgagccttgcattgagggc 598277

---

>gb|AC183772.2| Pan troglodytes BAC clone CH251-73E21 from chromosome 9, complete
              sequence
          Length = 162544

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ggccaacaaatatatgtacaaatg 139
              |||||||||||||||| |||||||
Sbjct: 129747 ggccaacaaatatatgaacaaatg 129770

---

>ref|XM_566621.1| Cryptococcus neoformans var. neoformans JEC21 isoleucine-tRNA ligase
            (CNA02290) partial mRNA
          Length = 3477

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 212  ctgagccttgcattgagggc 231
            ||||||||||||||||||||
Sbjct: 3388 ctgagccttgcattgagggc 3407

---

>gb|AC131114.3| Mus musculus BAC clone RP24-212G16 from chromosome 19, complete
             sequence
          Length = 160122

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tatatgtacaaatgaaagaa 145
             ||||||||||||||||||||
Sbjct: 10597 tatatgtacaaatgaaagaa 10578

---

>gb|AC127556.4| Mus musculus BAC clone RP24-344J6 from chromosome 19, complete sequence
          Length = 214042

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tatatgtacaaatgaaagaa 145
             ||||||||||||||||||||
Sbjct: 14875 tatatgtacaaatgaaagaa 14894

---

>emb|CR450820.5| Zebrafish DNA sequence from clone CH211-209J18 in linkage group 12,
             complete sequence
          Length = 127166

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 122   caaatatatgtacaaatgaaagaatatt 149
             ||||||| | ||||||||||||||||||
Sbjct: 14949 caaatatctttacaaatgaaagaatatt 14922

---

>emb|BX284677.8| Human DNA sequence from clone RP11-315E10 on chromosome 9, complete
              sequence
          Length = 166687

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ggccaacaaatatatgtacaaatg 139
              |||||||||||||||| |||||||
Sbjct: 139730 ggccaacaaatatatgaacaaatg 139753

---

>gb|U49945.1| Caenorhabditis elegans cosmid C02H7, complete sequence
          Length = 34671

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 413   agtgcatattgaaatattat 432
             ||||||||||||||||||||
Sbjct: 11949 agtgcatattgaaatattat 11968

---

>emb|BX664615.10| Human DNA sequence from clone RP11-104G3 on chromosome 9 Contains a
              RAB28, member RAS oncogene family pseudogene (RAB28), a
              pseudogene similar to part of recombining binding protein
              suppressor of hairless (Drosophila) (RBPSUH), two novel
              pseudogenes, a pseudogene similar to part of fibroblast
              growth factor 7 (keratinocyte growth factor) (FGF7), the 3'
              end of a novel gene and two CpG islands, complete sequence
          Length = 163837

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    ggccaacaaatatatgtacaaatg 139
              |||||||||||||||| |||||||
Sbjct: 149529 ggccaacaaatatatgaacaaatg 149506

---

>emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chromosome 9 Contains the
             5' end of a novel gene, a novel pseudogene and a
             pseudogene similar to part of ribosomal protein L10
             (RPL10), complete sequence
          Length = 153630

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 116   ggccaacaaatatatgtacaaatg 139
             |||||||||||||||| |||||||
Sbjct: 27542 ggccaacaaatatatgaacaaatg 27519

---

>emb|BX088651.9| Human DNA sequence from clone RP11-475I24 on chromosome 9 Contains a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), three novel
             pseudogenes, two novel genes, a recombining binding
             protein suppressor of hairless (Drosophila) (RBPSUH)
             pseudogene, a RAB28, member RAS oncogene family (RAB28)
             pseudogene and two CpG islands, complete sequence
          Length = 202891

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 116   ggccaacaaatatatgtacaaatg 139
             |||||||||||||||| |||||||
Sbjct: 63627 ggccaacaaatatatgaacaaatg 63604

---

>emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chromosome 13, complete
              sequence
          Length = 167477

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    atgtacaaatgaaagaatat 148
              ||||||||||||||||||||
Sbjct: 156638 atgtacaaatgaaagaatat 156619

---

>emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on chromosome 9 Contains the 3'
              end of the PGM5 gene for  phosphoglucomutase 5 (PGMRP), a
              novel gene (MGC34760), a squamous cell carcinoma antigen
              recognized by T cell (SART2) pseudogene and 2 novel genes,
              complete sequence
          Length = 169993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ggccaacaaatatatgtacaaatg 139
              |||||||||||||||| |||||||
Sbjct: 146383 ggccaacaaatatatgaacaaatg 146406

---

>emb|AL121585.22|HSBA504H3 Human DNA sequence from clone RP11-504H3 on chromosome 20 Contains gene
              SNX5 for sorting nexin 5, the C20orf72 gene, the PTMAP3
              gene for PTMA (prothymosin, alpha) pseudogene 3, the 3' end
              of the ZNF339 gene for zinc finger protein 339 and two CpG
              islands, complete sequence
          Length = 139953

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    aacaaatatatgtacaaatg 139
              ||||||||||||||||||||
Sbjct: 113639 aacaaatatatgtacaaatg 113658

---

>emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in linkage group 14,
             complete sequence
          Length = 214857

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 354   acatggccgtcgccactttccccatcat 381
             |||| ||||||||| |||||||||||||
Sbjct: 55934 acattgccgtcgcccctttccccatcat 55907

---

>emb|BX571697.3| Zebrafish DNA sequence from clone DKEY-201M8 in linkage group 6,
             complete sequence
          Length = 83282

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   aaatatatgtacaaatgaaa 142
             ||||||||||||||||||||
Sbjct: 10704 aaatatatgtacaaatgaaa 10685

---

>emb|CR788307.3| Human DNA sequence from clone RP11-384N15 on chromosome 9, complete
             sequence
          Length = 166827

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ggccaacaaatatatgtacaaatg 139
             |||||||||||||||| |||||||
Sbjct: 65990 ggccaacaaatatatgaacaaatg 66013

---

>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2,
              complete sequence
          Length = 244788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    cattgagggcttcgatgtac 241
              ||||||||||||||||||||
Sbjct: 203232 cattgagggcttcgatgtac 203213

---

>gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
          Length = 148359

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   atgtacaaatgaaagaatat 148
             ||||||||||||||||||||
Sbjct: 10461 atgtacaaatgaaagaatat 10442

---

>gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, complete sequence
          Length = 99685

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   ctgtgtgcattcttcatcag 551
             ||||||||||||||||||||
Sbjct: 46172 ctgtgtgcattcttcatcag 46153

---

>gb|AE003495.4| Drosophila melanogaster chromosome X, section 47 of 74 of the complete
              sequence
          Length = 314743

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    cgcatatgaattgcatatgt 662
              ||||||||||||||||||||
Sbjct: 103645 cgcatatgaattgcatatgt 103664

---

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 347     taccgcgacatggccgtcgc 366
               ||||||||||||||||||||
Sbjct: 5834140 taccgcgacatggccgtcgc 5834159

---

>dbj|AP003102.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-386B1, complete
             sequence
          Length = 73529

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ggccaacaaatatatgtacaaatg 139
             |||||||||||||||| |||||||
Sbjct: 26973 ggccaacaaatatatgaacaaatg 26996

---

>emb|BX088717.12| Human DNA sequence from clone RP11-624E13 on chromosome 9, complete
             sequence
          Length = 186615

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ggccaacaaatatatgtacaaatg 139
             |||||||||||||||| |||||||
Sbjct: 75417 ggccaacaaatatatgaacaaatg 75440

---

>emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, complete sequence
          Length = 174012

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 354    acatggccgtcgccactttccccatcat 381
              |||| ||||||||| |||||||||||||
Sbjct: 154698 acattgccgtcgcccctttccccatcat 154725

---

>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    aaatatatgtacaaatgaaa 142
              ||||||||||||||||||||
Sbjct: 157524 aaatatatgtacaaatgaaa 157505


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,884,692
Number of Sequences: 3902068
Number of extensions: 5884692
Number of successful extensions: 121658
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121396
Number of HSP's gapped (non-prelim): 254
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---