| Clone Name | rbaal31b17 |
|---|---|
| Clone Library Name | barley_pub |
>MAD18_ORYSA (Q6Z4G0) MADS-box transcription factor 18 (OsMADS18) (MADS-box| protein 2) (OsMADS2) (MADS-box protein 28) (OsMADS28) (FDRMADS7) Length = 249 Score = 60.1 bits (144), Expect = 6e-09 Identities = 33/72 (45%), Positives = 40/72 (55%) Frame = -3 Query: 662 REQLNEATNIHHQEQLSGAXXXXXXXXXXTAQDSMAPPNIGPYQSRGGGDPEPQPSPAQA 483 +E+ N N + +EQ +GA TA D + N Q RG G+ E QPSPAQA Sbjct: 176 KEKNNAIINTNREEQ-NGATPSTSSPTPVTAPDPIPTTNNSQSQPRGSGESEAQPSPAQA 234 Query: 482 NNSNLPPWMLRT 447 NS LPPWMLRT Sbjct: 235 GNSKLPPWMLRT 246
>TRYP_SARBU (P51588) Trypsin precursor (EC 3.4.21.4)| Length = 254 Score = 33.1 bits (74), Expect = 0.78 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +3 Query: 96 GWNTKTVSTCKTIPQIH*SLHTKVQPQDRAHRSAKKKGN*NVETRHCSL*CRKSSRQEDP 275 GW TK TC ++P+ + + Q + K G+ +T C+ +K + Q D Sbjct: 149 GWGTKCFLTCVSLPKTLQEVEVDIVDQKACASNEFKYGSQIQDTMVCAYALKKDACQGDS 208 Query: 276 IHPVAKTHGLIGGYT-GSHCRR 338 P+ + L+G + GS C R Sbjct: 209 GGPLVANNQLVGIVSWGSGCAR 230
>Y044_UREPA (Q9PRA1) Hypothetical protein UU044| Length = 782 Score = 30.4 bits (67), Expect = 5.1 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 569 QDSMAPPNIGPYQSRGGGDPEPQPSPAQA-NNSN 471 ++ + PPN P + +P PQP P Q NNSN Sbjct: 139 KEELLPPNPPPPKEEPKPEPNPQPQPQQVPNNSN 172
>SPEE_SHIFL (Q83MF0) Spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 287 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +3 Query: 279 HPVAKTHGLIGGYTGSHCRRWTAHRQLASIVGACQAPLSPSGGVV*GCRQ--PSSVADGA 452 H AK +IGG G+ R T H+ + SI + GVV CRQ P+ A Sbjct: 74 HGHAKHVLIIGGGDGAMLREVTRHKNVESI-----TMVEIDAGVVSFCRQYLPNHNAGSY 128 Query: 453 EHPRWQIAV 479 + PR+Q+ + Sbjct: 129 DDPRFQLVI 137
>ITA7_RAT (Q63258) Integrin alpha-7 (H36-alpha7) [Contains: Integrin alpha-7| heavy chain; Integrin alpha-7 light chain] Length = 1106 Score = 30.4 bits (67), Expect = 5.1 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -3 Query: 560 MAPPNIGPYQSRGGGDPEPQPSPAQANN 477 +A + GPY++ G D +P+PSP AN+ Sbjct: 206 LAQVDDGPYEAGGEKDQDPRPSPVPANS 233
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 566 DSMAPPNIGPYQSRGGGDPEPQPSPAQANNSNLPPWMLRTI 444 D+ PP P Q + PEP+P P +A+ PP L+T+ Sbjct: 2201 DAPQPPAPQPAQDKA---PEPRPEPVRASKPAPPPQALQTL 2238
>HOLB_BUCAP (Q8K9J2) DNA polymerase III delta' subunit (EC 2.7.7.7)| Length = 328 Score = 29.6 bits (65), Expect = 8.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 Query: 124 VKPYRKSIKAYTRKSNHKIVLIDQRKKKG 210 +KPY+K I+ + RK H +LI +K G Sbjct: 8 IKPYKKIIRLHERKKAHHAILIKTQKGMG 36 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,561,326 Number of Sequences: 219361 Number of extensions: 2405844 Number of successful extensions: 7332 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 6842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7310 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)