Clone Name	rbaal31b17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box prote...	1233	0.0
2	gb|AY198328.1| Lolium perenne MADS3 mRNA, complete cds	208	2e-50
3	gb|BT017841.1| Zea mays clone EL01N0510A04.c mRNA sequence	48	0.038
4	emb|AJ430695.1|ZMA430695 Zea mays mRNA for putative MADS-domain ...	48	0.038
5	gb|AY104958.1| Zea mays PCO115876 mRNA sequence	48	0.038
6	gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, compl...	44	0.59
7	gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome	44	0.59
8	gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, comp...	44	0.59
9	ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA	42	2.3
10	emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein	42	2.3
11	emb|AL049558.1|SPBC216 S.pombe chromosome II cosmid c216	42	2.3
12	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
13	gb|AF139665.1|AF139665 Oryza sativa FDRMADS7 mRNA, partial cds	42	2.3
14	dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
15	gb|AF091458.1|AF091458 Oryza sativa MADS box transcription facto...	42	2.3
16	dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.3
17	gb|AF107885.2|DJ270M14 Homo sapiens chromosome 14q24.3 clone BAC...	42	2.3
18	emb|Y19036.1|SPO19036 Schizosaccharomyces pombe swi1 gene for ma...	42	2.3
19	ref|XM_461623.1| Debaryomyces hansenii CBS767 hypothetical prote...	40	9.2
20	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	40	9.2
21	gb|AY293708.1| Idiosepius pygmaeus cytochrome oxidase subunit I ...	40	9.2
22	emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i...	40	9.2
23	gb|AC125069.4| Mus musculus BAC clone RP23-436E5 from chromosome...	40	9.2
24	gb|BC036753.1| Homo sapiens aspartate beta-hydroxylase domain co...	40	9.2
25	emb|Z99714.2|HS1048E9 Human DNA sequence from clone CTB-1048E9 o...	40	9.2
26	gb|AC162302.2| Mus musculus chromosome 15, clone RP23-463E8, com...	40	9.2
27	emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS...	40	9.2
28	emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, co...	40	9.2
29	gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell...	40	9.2
30	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	40	9.2
31	gb|AY122073.1| Drosophila melanogaster AT15718 full insert cDNA	40	9.2
32	dbj|AK097157.1| Homo sapiens cDNA FLJ39838 fis, clone SPLEN20141...	40	9.2
33	emb|CR603469.1| full-length cDNA clone CS0DL006YI17 of B cells (...	40	9.2
34	ref|NM_141089.1| Drosophila melanogaster CG11249-RA (CG11249), mRNA	40	9.2
35	ref|NM_020437.3| Homo sapiens aspartate beta-hydroxylase domain ...	40	9.2
36	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	40	9.2
37	emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4,...	40	9.2
38	dbj|AB193809.1| Sepia pardex mitochondrial COI gene for cytochro...	40	9.2
39	dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	40	9.2
40	gb|AC155850.6| Mus musculus 6 BAC RP24-545D3 (Roswell Park Cance...	40	9.2
41	gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cance...	40	9.2
42	emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-5...	40	9.2
43	gb|AC148992.3| Mus musculus BAC clone RP24-337C15 from 10, compl...	40	9.2
44	emb|CR456391.1| Homo sapiens bK1048E9.3 full length open reading...	40	9.2
45	gb|AF131110.1|AF131110 Tetranychus piercei cytochrome oxidase su...	40	9.2
46	gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76...	40	9.2
47	gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, com...	40	9.2
48	emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, ...	40	9.2
49	emb|AL357094.4|CNS05TDT Human chromosome 14 DNA sequence BAC R-1...	40	9.2
50	emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chr...	40	9.2
51	emb|AL161993.1|HSM802614 Homo sapiens mRNA; cDNA DKFZp761P039 (f...	40	9.2

---

>emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box protein 3 (m3 gene)
          Length = 1540

 Score = 1233 bits (622), Expect = 0.0
 Identities = 645/654 (98%), Gaps = 2/654 (0%)
 Strand = Plus / Minus

                                                                        
Query: 20   tttgcaagaagtacagtgccctactcttttaataacaatataaagagaaggcagcgccct 79
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1521 tttgcaagaagtacagtgccctactcttttaataacaatataaagagaaggcagcgccct 1462

                                                                        
Query: 80   tttgcatttttacaacggatggaatacaaaaaccgtgtcaacgtgtaaaaccataccgca 139
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1461 tttgcatttttacaacggatggaatacaaaaaccgtgtcaacgtgtaaaaccataccgca 1402

                                                                        
Query: 140  aatccattaaagcttacacacgaaagtccaaccacaagatcgtgctcatcgatcagcgnn 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 1401 aatccattaaagcttacacacgaaagtccaaccacaagatcgtgctcatcgatcagcgaa 1342

                                                                        
Query: 200  nnnnnnngggaactgaaacgtggaaacaagacactgctccctatagtgcaggaaaagctc 259
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 aaaaa--gggaactgaaacgtggaaacaagacactgctccctatagtgcaggaaaagctc 1284

                                                                        
Query: 260  aagacaggaagaccccattcaccctgtagcaaagacacatggtcttattggtggctacac 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1283 aagacaggaagaccccattcaccctgtagcaaagacacatggtcttattggtggctacac 1224

                                                                        
Query: 320  cggaagccattgccggagatggactgcacaccggcagctagcttccatagtgggcgcgtg 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1223 cggaagccattgccggagatggactgcacaccggcagctagcttccatagtgggcgcgtg 1164

                                                                        
Query: 380  tcaggcgccattgtcgccttcaggtggagtcgtatgaggctgtcgccagccttcatctgt 439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 tcaggcgccattgtcgccttcaggtggagtcgtatgaggctgtcgccagccttcatctgt 1104

                                                                        
Query: 440  tgccgatggtgcggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacg 499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 tgccgatggtgcggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacg 1044

                                                                        
Query: 500  gctgaggttctggatcccctcctcctctagattgatatggcccaatatttggaggtgcca 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 gctgaggttctggatcccctcctcctctagattgatatggcccaatatttggaggtgcca 984

                                                                        
Query: 560  tggaatcttgggccgtcggtggtgtaggtgacggtgagcttgttgttgctccactcagct 619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983  tggaatcttgggccgtcggtggtgtaggtgacggtgagcttgttgttgctccactcagct 924

                                                                  
Query: 620  gctcctggtgatgaatatttgttgcttcattcaactgctcccggtgatgaatat 673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923  gctcctggtgatgaatatttgttgcttcattcaactgctcccggtgatgaatat 870



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 602 ttgttgctccactcagctgctcctggtgatgaatatttg 640
           |||||||| || ||| ||||||| |||||||||||||||
Sbjct: 905 ttgttgcttcattcaactgctcccggtgatgaatatttg 867

---

>gb|AY198328.1| Lolium perenne MADS3 mRNA, complete cds
          Length = 1255

 Score =  208 bits (105), Expect = 2e-50
 Identities = 212/248 (85%), Gaps = 6/248 (2%)
 Strand = Plus / Minus

                                                                       
Query: 432 tcatctgttgccgatggtgcggagcatccacggtggcagattgctgttgtttgcttgtgc 491
           ||||||||| | |||||||||||||||||| ||||| || |||| | |||||||||||||
Sbjct: 928 tcatctgttactgatggtgcggagcatccatggtggtagcttgccgctgtttgcttgtgc 869

                                                                       
Query: 492 tggtgacggctgaggttctggatcccctcctcct------ctagattgatatggcccaat 545
            || |||||||||| |||||| ||| ||||| ||      ||||||||| ||| ||||||
Sbjct: 868 cggggacggctgagattctggctcctctcctgctgcttctctagattgagatgacccaat 809

                                                                       
Query: 546 atttggaggtgccatggaatcttgggccgtcggtggtgtaggtgacggtgagcttgttgt 605
           |||| ||| ||||| ||||||| || ||| |  |||||||||||||||||||||||||||
Sbjct: 808 atttagagttgccacggaatctaggaccgccactggtgtaggtgacggtgagcttgttgt 749

                                                                       
Query: 606 tgctccactcagctgctcctggtgatgaatatttgttgcttcattcaactgctcccggtg 665
           ||||||| | ||||||||||||| |||||||| ||||| |||||||| |||||||||| |
Sbjct: 748 tgctccattgagctgctcctggttatgaatatgtgttgtttcattcatctgctcccggcg 689

                   
Query: 666 atgaatat 673
           ||||||||
Sbjct: 688 atgaatat 681



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 51/52 (98%)
 Strand = Plus / Minus

                                                                
Query: 266  ggaagaccccattcaccctgtagcaaagacacatggtcttattggtggctac 317
            |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1104 ggaagaccccattcaccctgtaacaaagacacatggtcttattggtggctac 1053



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 618 ctgctcctggtgatgaatatttgttgcttcattcaactgctcccggtgatgaatat 673
           ||||||| || |||||||||||| |||| |||||  |||||| |||||||||||||
Sbjct: 700 ctgctcccggcgatgaatatttgctgctccattcgtctgctctcggtgatgaatat 645



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 346  cacaccggcagctagcttccat 367
            ||||||||||||||||||||||
Sbjct: 1021 cacaccggcagctagcttccat 1000

---

>gb|BT017841.1| Zea mays clone EL01N0510A04.c mRNA sequence
          Length = 683

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 448 gtgcggagcatccacggtggcagattgctgttgtttgcttgtgc 491
           |||||||||||||| |||||||| ||||   |||||||||||||
Sbjct: 232 gtgcggagcatccatggtggcaggttgcccctgtttgcttgtgc 189

---

>emb|AJ430695.1|ZMA430695 Zea mays mRNA for putative MADS-domain transcription factor (m28
           gene)
          Length = 1224

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 448 gtgcggagcatccacggtggcagattgctgttgtttgcttgtgc 491
           |||||||||||||| |||||||| ||||   |||||||||||||
Sbjct: 834 gtgcggagcatccatggtggcaggttgcccctgtttgcttgtgc 791

---

>gb|AY104958.1| Zea mays PCO115876 mRNA sequence
          Length = 1282

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 448 gtgcggagcatccacggtggcagattgctgttgtttgcttgtgc 491
           |||||||||||||| |||||||| ||||   |||||||||||||
Sbjct: 870 gtgcggagcatccatggtggcaggttgcccctgtttgcttgtgc 827

---

>gb|AC094020.2| Homo sapiens chromosome 3 clone RP11-425J9, complete sequence
          Length = 194729

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 240    ctatagtgcaggaaaagctcaa 261
              ||||||||||||||||||||||
Sbjct: 151256 ctatagtgcaggaaaagctcaa 151235

---

>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 317    caccggaagccattgccggaga 338
              ||||||||||||||||||||||
Sbjct: 338074 caccggaagccattgccggaga 338053

---

>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence
          Length = 181750

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 240  ctatagtgcaggaaaagctcaa 261
            ||||||||||||||||||||||
Sbjct: 7787 ctatagtgcaggaaaagctcaa 7766

---

>ref|XM_479092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1088

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
           ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 823 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 764

            
Query: 511 g 511
           |
Sbjct: 763 g 763

---

>emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein
          Length = 974

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
           ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 810 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 751

            
Query: 511 g 511
           |
Sbjct: 750 g 750

---

>emb|AL049558.1|SPBC216 S.pombe chromosome II cosmid c216
          Length = 25311

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    tttaataacaatataaagaga 67
             |||||||||||||||||||||
Sbjct: 19181 tttaataacaatataaagaga 19201

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                            
Query: 451      cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
                ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 24739834 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 24739775

                 
Query: 511      g 511
                |
Sbjct: 24739774 g 24739774

---

>gb|AF139665.1|AF139665 Oryza sativa FDRMADS7 mRNA, partial cds
          Length = 914

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
           ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 701 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 642

            
Query: 511 g 511
           |
Sbjct: 641 g 641

---

>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 451   cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
             ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 95771 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 95712

              
Query: 511   g 511
             |
Sbjct: 95711 g 95711

---

>gb|AF091458.1|AF091458 Oryza sativa MADS box transcription factor MADS18 (MADS18) mRNA,
           complete cds
          Length = 1031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
           ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 796 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 737

            
Query: 511 g 511
           |
Sbjct: 736 g 736

---

>dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A02, full
           insert sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 451 cggagcatccacggtggcagattgctgttgtttgcttgtgctggtgacggctgaggttct 510
           ||||||||||| || || || |||||||||  ||||||||| || ||||| |||| ||||
Sbjct: 823 cggagcatccatggcggaagcttgctgttgcctgcttgtgccggagacggttgagcttct 764

            
Query: 511 g 511
           |
Sbjct: 763 g 763

---

>gb|AF107885.2|DJ270M14 Homo sapiens chromosome 14q24.3 clone BAC270M14 transforming growth
             factor-beta 3 (TGF-beta 3) gene, complete cds; and unknown
             genes
          Length = 192126

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 605   ttgctccactcagctgctcct 625
             |||||||||||||||||||||
Sbjct: 82480 ttgctccactcagctgctcct 82500

---

>emb|Y19036.1|SPO19036 Schizosaccharomyces pombe swi1 gene for mating-type switching
           protein, strain L972
          Length = 4013

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  tttaataacaatataaagaga 67
           |||||||||||||||||||||
Sbjct: 256 tttaataacaatataaagaga 236

---

>ref|XM_461623.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G02310g)
            partial mRNA
          Length = 3444

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 631  tgaatatttgttgcttcatt 650
            ||||||||||||||||||||
Sbjct: 1118 tgaatatttgttgcttcatt 1099

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     caaatccattaaagcttaca 157
               ||||||||||||||||||||
Sbjct: 4418397 caaatccattaaagcttaca 4418378

---

>gb|AY293708.1| Idiosepius pygmaeus cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 617

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 tggatcccctcctcctctag 529
           ||||||||||||||||||||
Sbjct: 596 tggatcccctcctcctctag 577

---

>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
              complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     ttttaataacaatataaaga 65
              ||||||||||||||||||||
Sbjct: 190788 ttttaataacaatataaaga 190807

---

>gb|AC125069.4| Mus musculus BAC clone RP23-436E5 from chromosome 2, complete sequence
          Length = 199446

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    acaatataaagagaaggcag 73
             ||||||||||||||||||||
Sbjct: 78616 acaatataaagagaaggcag 78635

---

>gb|BC036753.1| Homo sapiens aspartate beta-hydroxylase domain containing 2, mRNA
            (cDNA clone MGC:45029 IMAGE:5186506), complete cds
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   aaagagaaggcagcgccctt 80
            ||||||||||||||||||||
Sbjct: 1341 aaagagaaggcagcgccctt 1322

---

>emb|Z99714.2|HS1048E9 Human DNA sequence from clone CTB-1048E9 on chromosome 22, complete
             sequence
          Length = 87646

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    aaagagaaggcagcgccctt 80
             ||||||||||||||||||||
Sbjct: 27552 aaagagaaggcagcgccctt 27533

---

>gb|AC162302.2| Mus musculus chromosome 15, clone RP23-463E8, complete sequence
          Length = 171134

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 606    tgctccactcagctgctcctggtg 629
              |||||| |||||||||||||||||
Sbjct: 165185 tgctcccctcagctgctcctggtg 165162

---

>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 631    tgaatatttgttgcttcatt 650
              ||||||||||||||||||||
Sbjct: 167090 tgaatatttgttgcttcatt 167109

---

>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             1/8
          Length = 348517

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   gacggtgagcttgttgttgc 608
             ||||||||||||||||||||
Sbjct: 52284 gacggtgagcttgttgttgc 52265

---

>gb|AC010571.8| Drosophila melanogaster 3L BAC RP98-22O3 (Roswell Park Cancer Institute
             Drosophila BAC library) complete sequence
          Length = 169138

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   gatggtgcggagcatccacg 463
             ||||||||||||||||||||
Sbjct: 25078 gatggtgcggagcatccacg 25097

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 440    tgccgatggtgcggagcatccacg 463
              |||||||||||||| |||||||||
Sbjct: 660766 tgccgatggtgcggggcatccacg 660789

---

>gb|AY122073.1| Drosophila melanogaster AT15718 full insert cDNA
          Length = 2133

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 gatggtgcggagcatccacg 463
           ||||||||||||||||||||
Sbjct: 880 gatggtgcggagcatccacg 899

---

>dbj|AK097157.1| Homo sapiens cDNA FLJ39838 fis, clone SPLEN2014119, weakly similar
           to Aspartate beta-hydroxylase, isoform a
          Length = 2658

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  aaagagaaggcagcgccctt 80
           ||||||||||||||||||||
Sbjct: 708 aaagagaaggcagcgccctt 689

---

>emb|CR603469.1| full-length cDNA clone CS0DL006YI17 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1933

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   aaagagaaggcagcgccctt 80
            ||||||||||||||||||||
Sbjct: 1404 aaagagaaggcagcgccctt 1385

---

>ref|NM_141089.1| Drosophila melanogaster CG11249-RA (CG11249), mRNA
          Length = 2110

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 444 gatggtgcggagcatccacg 463
           ||||||||||||||||||||
Sbjct: 880 gatggtgcggagcatccacg 899

---

>ref|NM_020437.3| Homo sapiens aspartate beta-hydroxylase domain containing 2 (ASPHD2),
            mRNA
          Length = 1931

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   aaagagaaggcagcgccctt 80
            ||||||||||||||||||||
Sbjct: 1341 aaagagaaggcagcgccctt 1322

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 453     gagcatccacggtggcagat 472
               ||||||||||||||||||||
Sbjct: 4351649 gagcatccacggtggcagat 4351630

---

>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09,
             complete sequence
          Length = 127117

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   gagcatccacggtggcagat 472
             ||||||||||||||||||||
Sbjct: 99517 gagcatccacggtggcagat 99498

---

>dbj|AB193809.1| Sepia pardex mitochondrial COI gene for cytochrome c oxidase
           subunit I, partial cds
          Length = 657

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 tggatcccctcctcctctag 529
           ||||||||||||||||||||
Sbjct: 636 tggatcccctcctcctctag 617

---

>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10
          Length = 77589

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    agtgccctactcttttaata 53
             ||||||||||||||||||||
Sbjct: 71888 agtgccctactcttttaata 71907

---

>gb|AC155850.6| Mus musculus 6 BAC RP24-545D3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 195675

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 635    tatttgttgcttcattcaactgct 658
              |||||||||||||| |||||||||
Sbjct: 174535 tatttgttgcttcactcaactgct 174558

---

>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 164242

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 635   tatttgttgcttcattcaactgct 658
             |||||||||||||| |||||||||
Sbjct: 27352 tatttgttgcttcactcaactgct 27375

---

>emb|AL359950.4|CNS05TF2 Human chromosome 14 DNA sequence BAC R-566K8 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194407

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  agacaggaagaccccattca 280
            ||||||||||||||||||||
Sbjct: 8763 agacaggaagaccccattca 8782

---

>gb|AC148992.3| Mus musculus BAC clone RP24-337C15 from 10, complete sequence
          Length = 164586

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 632   gaatatttgttgcttcattc 651
             ||||||||||||||||||||
Sbjct: 81855 gaatatttgttgcttcattc 81874

---

>emb|CR456391.1| Homo sapiens bK1048E9.3 full length open reading frame (ORF) cDNA
            clone (cDNA clone C22ORF:pGEM.bK1048E9.3.V2)
          Length = 1202

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   aaagagaaggcagcgccctt 80
            ||||||||||||||||||||
Sbjct: 1036 aaagagaaggcagcgccctt 1017

---

>gb|AF131110.1|AF131110 Tetranychus piercei cytochrome oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 598

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 tggatcccctcctcctctag 529
           ||||||||||||||||||||
Sbjct: 433 tggatcccctcctcctctag 414

---

>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
             sequence
          Length = 294272

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 444   gatggtgcggagcatccacg 463
             ||||||||||||||||||||
Sbjct: 92797 gatggtgcggagcatccacg 92816

---

>gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, complete sequence
          Length = 243676

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 606   tgctccactcagctgctcctggtg 629
             |||||| |||||||||||||||||
Sbjct: 86874 tgctcccctcagctgctcctggtg 86851

---

>emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, complete sequence
          Length = 170231

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   cttttaataacaatataaag 64
            ||||||||||||||||||||
Sbjct: 9214 cttttaataacaatataaag 9233

---

>emb|AL357094.4|CNS05TDT Human chromosome 14 DNA sequence BAC R-14N4 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158151

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   agacaggaagaccccattca 280
             ||||||||||||||||||||
Sbjct: 17413 agacaggaagaccccattca 17394

---

>emb|AL928789.4| Mouse DNA sequence from clone RP23-435F21 on chromosome 2, complete
              sequence
          Length = 202887

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     acaatataaagagaaggcag 73
              ||||||||||||||||||||
Sbjct: 200337 acaatataaagagaaggcag 200356

---

>emb|AL161993.1|HSM802614 Homo sapiens mRNA; cDNA DKFZp761P039 (from clone DKFZp761P039);
           partial cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  aaagagaaggcagcgccctt 80
           ||||||||||||||||||||
Sbjct: 419 aaagagaaggcagcgccctt 400


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,892,405
Number of Sequences: 3902068
Number of extensions: 5892405
Number of successful extensions: 107196
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106965
Number of HSP's gapped (non-prelim): 230
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---