| Clone Name | rbaal8c07 |
|---|---|
| Clone Library Name | barley_pub |
>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100| Length = 1038 Score = 90.9 bits (224), Expect = 3e-18 Identities = 42/78 (53%), Positives = 57/78 (73%) Frame = -1 Query: 608 SKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQGEQPREGFLLLSNLVEDQMAG 429 S++ +E +N S+ M + + LRE D S + + +VRQGEQPREGFLLL NL+EDQM G Sbjct: 961 SRVTFQEQENGMSKKLMRLVKKLRESDPSYHPMCFLVRQGEQPREGFLLLRNLIEDQMGG 1020 Query: 428 TSSYMDWILQIHRQTQSS 375 +S Y+DWILQ+HRQ Q + Sbjct: 1021 SSGYVDWILQLHRQVQQN 1038
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 44.3 bits (103), Expect = 3e-04 Identities = 25/76 (32%), Positives = 47/76 (61%) Frame = -1 Query: 608 SKIQLRECDNNHSRNFMAVQRALRERDSSCYQLPRVVRQGEQPREGFLLLSNLVEDQMAG 429 S+ L++ DN S+ F V +R + SS ++ ++ ++G+ P L S +VED+ +G Sbjct: 1020 SQYVLQKYDNQLSKKFNDVVNEIRRQRSSYLRI-KLCKKGD-PAGNMLFQSYMVEDRGSG 1077 Query: 428 TSSYMDWILQIHRQTQ 381 +SY+D+++ +HRQ Q Sbjct: 1078 GASYVDFLVSVHRQIQ 1093
>TFDA_BURSR (Q45423) Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate| dioxygenase (EC 1.14.11.-) (2,4-D dioxygenase) Length = 297 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 323 ADSAAVQVPGRPGRPLNHWNKMASQPCSTYAILLAATLLPSAGNTNF 183 A++ A +V G L H + QP + Y++L A L PS G+T F Sbjct: 97 AEADAREVVGNFANQLWHSDSSFQQPAARYSMLSAIVLPPSGGDTEF 143
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 31.2 bits (69), Expect = 2.5 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = -1 Query: 545 ALRERDSSCYQLPRVVRQGEQPREGFLLLSNLVEDQMAGTSSYMDWILQIH 393 +LR + S P++VRQG EG + S LVED Y+D++ +IH Sbjct: 833 SLRMQFPSMALHPQIVRQGLDGSEGEIF-STLVEDNTREGFGYLDFLTKIH 882
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 29.6 bits (65), Expect = 7.2 Identities = 28/91 (30%), Positives = 31/91 (34%) Frame = +2 Query: 272 G*EGDQGDRGLAQQPNLQRFTQKQKFLEHPRYIITSSVFGGESGVSNPCNCWFQPSGPRR 451 G GDQGD+G A QP S GE G P +P P Sbjct: 160 GLPGDQGDKGEAGQPGQP----------------GSDAAPGEQGPKGPNGAPGKPGAPGA 203 Query: 452 GWTEARSPLLAAHLAVQHGAAGNTKNPSPSG 544 E L A VQ G G+T P P G Sbjct: 204 PGDEG---LPAVCEPVQKGEPGSTGEPGPVG 231
>TFDA_RALEJ (P10088) Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate| dioxygenase (EC 1.14.11.-) (2,4-D dioxygenase) Length = 287 Score = 29.3 bits (64), Expect = 9.4 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = -1 Query: 323 ADSAAVQVPGRPGRPLNHWNKMASQPCSTYAILLAATLLPSAGNTNF 183 A A +V G L H + QP + Y++L A + PS G+T F Sbjct: 97 AQRDAREVVGNFANQLWHSDSSFQQPAARYSMLSAVVVPPSGGDTEF 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,874,020 Number of Sequences: 219361 Number of extensions: 2100886 Number of successful extensions: 6010 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5735 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6008 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)