>ALR2_VIBPA (Q87HG4) Alanine racemase 2 (EC 5.1.1.1)|
          Length = 409

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -1

Query: 330 EIDLNQFFSSPEAIQSLLSDRAKLCQLLEAN 238
           EIDL QF  + E  +S ++D+ K+C +++A+
Sbjct: 48  EIDLGQFKQNIEQFKSHMNDQTKICAVMKAD 78

>YPMC_ECOLI (P07115) Hypothetical mobilization operon protein C|
          Length = 112

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)
 Frame = +2

Query: 314 WFRSISGSLCC*DEPSACAVWLATCDCSPACL-------SVCAANS 430
           W  + S S  C     AC VWL TC  S A +       S+C+ANS
Sbjct: 47  WRWAFSHSAAC--ASLACWVWLMTCRASSASVAMLWASGSICSANS 90

>MUKB_ACTAC (Q93IE8) Chromosome partition protein mukB (Structural maintenance|
           of chromosome-related protein)
          Length = 1496

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 354 SSQQQREPEIDLNQFFSSPEAIQSLLSDRAKLCQLL 247
           ++QQ+ E E +LNQF +  + I+  L D  +  QLL
Sbjct: 868 TNQQRNEIERELNQFLTGEQQIRIRLDDAKERMQLL 903

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 435 QQEFAAQTLRQAGEQSQVANQTAQADGSSQQQREPEIDLNQF 310
           QQ+   Q  +QA +Q QVA   A +    QQQ++ +  L QF
Sbjct: 204 QQQAVQQQQQQAVQQQQVAYAVAASPQLQQQQQQQQHRLAQF 245

>ACADM_RAT (P08503) Medium-chain specific acyl-CoA dehydrogenase,|
           mitochondrial precursor (EC 1.3.99.3) (MCAD)
          Length = 421

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
 Frame = +2

Query: 155 GHDKPKVRH-----HPPICCRRCA--PEAGXISLGF---ASRSWQSFARSLSRLWIASGD 304
           G+D+ K ++       P+ C  C   P AG    G    A +    +  +  ++WI +G 
Sbjct: 137 GNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMWITNGG 196

Query: 305 EKNWF 319
           + NW+
Sbjct: 197 KANWY 201

>SKS1_YEAST (Q12505) Serine/threonine-protein kinase SKS1 (EC 2.7.11.1)|
           (Suppressor kinase of SNF3)
          Length = 502

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -1

Query: 435 QQEFAAQTLRQAGEQSQVANQTAQADGSSQQQREPEIDLNQFFSSPEAIQ 286
           QQ+   Q   Q  +Q Q+ NQ        ++  EPE D+   ++S  +++
Sbjct: 384 QQQQQVQEQEQEQKQEQIQNQEQAQQQQEEEDAEPESDIPSTYNSDGSME 433

>INVO_RAT (P48998) Involucrin|
          Length = 568

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = -1

Query: 435 QQEFAAQTLRQAGEQSQVANQTAQADGSSQQQR--EPEIDLNQFFSSPEAIQSLLSDRAK 262
           QQE   Q L    +Q  +A Q     G  Q+++  EPE+ L Q   +PE  + +L ++ +
Sbjct: 137 QQESQGQGLCLGQQQDVLAPQELHM-GQHQKEKLQEPELPLGQQQKTPEEQELILGEKQQ 195

Query: 261 LCQLLEAN--PKLMXPASGAHRRQQ 193
              L+E +  P+      G  ++QQ
Sbjct: 196 KLHLVERHQEPQEQELHHGQKQKQQ 220

>YOR5_CALSR (P40982) Hypothetical 23.9 kDa protein in xynA 3'region (ORF5)|
          Length = 203

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 24/76 (31%), Positives = 42/76 (55%)
 Frame = -2

Query: 347 NSRENRRLI*TNSSHLQKQSRAC*AIVRSFANFWRQTLN*CXXLQERIGGSK*EGGV*LW 168
           N +E+R ++     HL+ +     A+ + F +F  +++N    L++RI     +GG+   
Sbjct: 4   NFKEDRCIV----CHLKNR-----AMDKFFDDFLYESVN-DYSLRDRIR----KGGI--- 46

Query: 167 VCRGHAARLSAFGDVL 120
            C GHA +L +FGDVL
Sbjct: 47  -CPGHARKLESFGDVL 61

>KRA99_HUMAN (Q9BYP9) Keratin-associated protein 9-9 (Keratin-associated protein|
           9.9) (Ultrahigh sulfur keratin-associated protein 9.9)
          Length = 154

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 329 SGSLCC*DEPSACAVWLATCDCSPACLSVCAANSC 433
           S + CC  +PS C   +++C C P C   C  N+C
Sbjct: 33  SSTPCC--QPSCC---VSSC-CQPCCRPACCQNTC 61

>KRA94_HUMAN (Q9BYQ2) Keratin-associated protein 9-4 (Keratin-associated protein|
           9.4) (Ultrahigh sulfur keratin-associated protein 9.4)
          Length = 154

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 329 SGSLCC*DEPSACAVWLATCDCSPACLSVCAANSC 433
           S + CC  +PS C   +++C C P C   C  N+C
Sbjct: 33  SSTPCC--QPSCC---VSSC-CQPCCRPTCCQNTC 61

>KRA98_HUMAN (Q9BYQ0) Keratin-associated protein 9-8 (Keratin-associated protein|
           9.8) (Ultrahigh sulfur keratin-associated protein 9.8)
          Length = 159

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 329 SGSLCC*DEPSACAVWLATCDCSPACLSVCAANSC 433
           S + CC  +PS C   +++C C P C   C  N+C
Sbjct: 28  SSTPCC--QPSCC---VSSC-CQPCCRPTCCQNTC 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,186,638
Number of Sequences: 219361
Number of extensions: 1014991
Number of successful extensions: 3249
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3154
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)