>BLC_ECOLI (P0A901) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = -2

Query: 547 ATYELMEDGATVHVLNETWS--KGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLPIIPV 374
           ATY L +DG  ++V+N+ ++  +G     EG AY    A   A LKV F+ P +      
Sbjct: 62  ATYSLRDDGG-LNVINKGYNPDRGMWQQSEGKAYFTG-APTRAALKVSFFGPFY------ 113

Query: 373 VGDYWVLYVDDDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAK 206
            G Y V+ +D +Y++ALV  P R  LWIL R   I +EV  ++L  A  EG+DV+K
Sbjct: 114 -GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

>BLC_ECO57 (P0A902) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 2/116 (1%)
 Frame = -2

Query: 547 ATYELMEDGATVHVLNETWS--KGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLPIIPV 374
           ATY L +DG  ++V+N+ ++  +G     EG AY    A   A LKV F+ P +      
Sbjct: 62  ATYSLRDDGG-LNVINKGYNPDRGMWQQSEGKAYFTG-APTRAALKVSFFGPFY------ 113

Query: 373 VGDYWVLYVDDDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAK 206
            G Y V+ +D +Y++ALV  P R  LWIL R   I +EV  ++L  A  EG+DV+K
Sbjct: 114 -GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVATREGFDVSK 168

>BLC_CITFR (Q46036) Outer membrane lipoprotein blc precursor|
          Length = 177

 Score = 65.1 bits (157), Expect = 1e-10
 Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
 Frame = -2

Query: 547 ATYELMEDGATVHVLNETWSKGKRDY--IEGTAY-KADPASDEAKLKVKFYVPPFLPIIP 377
           ATY L +DG  ++V+N+ ++  +  +   EG AY   DP++  A LKV F+ P +     
Sbjct: 62  ATYSLRDDGG-INVINKGYNPDREMWQKTEGKAYFTGDPST--AALKVSFFGPFY----- 113

Query: 376 VVGDYWVLYVDDDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKL 203
             G Y V+ +D +Y++ALV  P R  LWIL R   I +E+  Q+L  A  EG++V KL
Sbjct: 114 --GGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEMKQQMLAIATREGFEVNKL 169

>BLC_VIBCH (Q08790) Outer membrane lipoprotein blc precursor (Protein vlp)|
          Length = 171

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
 Frame = -2

Query: 547 ATYELMEDGATVHVLNETWSKGKRDY--IEGTAYKADPASDEAKLKVKFYVPPFLPIIPV 374
           A Y +  DG  + VLN  +S+ K ++   EG AY  + ++D   LKV F+ P +      
Sbjct: 57  AEYRVRNDGG-ISVLNRGYSEEKGEWKEAEGKAYFVNGSTD-GYLKVSFFGPFY------ 108

Query: 373 VGDYWVLYVD-DDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKL 203
            G Y V  +D ++Y YA V  P  + LW+L R   +E  + ++ +E +KE G+D  +L
Sbjct: 109 -GSYVVFELDRENYSYAFVSGPNTEYLWLLSRTPTVERGILDKFIEMSKERGFDTNRL 165

>YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor|
          Length = 169

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
 Frame = -2

Query: 556 DTRATYELMEDGATVHVLNETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLPIIP 377
           ++ A Y+L+E    + V N     G+ + + GTA    PA++  ++   F  P  L +  
Sbjct: 53  NSTANYQLLEPNK-IQVTNNCEINGRINSVTGTAI---PAAN-TRIVSGFLTPASLMVNF 107

Query: 376 VVG--DYWVLYVDDDYQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKL 203
             G   Y V+++D++YQYA+V      +LWIL R  +I +  YNQL+     +GYDV  L
Sbjct: 108 GYGFSPYNVIFIDENYQYAIVSGGN-DTLWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166

>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
 Frame = -2

Query: 562 GRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLPI 383
           GR  +A Y L E+G    +  E  + G  + IEG A   +  ++ AKL+VKF+   F+P 
Sbjct: 59  GRCIQANYSLKENGKIKVLNQELRADGTVNQIEGEASPVN-ITEPAKLEVKFFW--FMPS 115

Query: 382 IPVVGDYWVLYVDDDYQYALVGEP-------RRKSLWILCRKTHIEEEVYNQLLEKAKEE 224
            P    YWVL  D +  YALV          R    WIL R  H+  E  + L       
Sbjct: 116 AP----YWVLATDYE-NYALVYSCVSIINLFRVDYAWILARNRHLPSETVDFLKNILTSN 170

Query: 223 GYDVAKLHKTPQSDPP 176
             DV K+  T Q + P
Sbjct: 171 NIDVKKMTVTDQENCP 186

>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
 Frame = -2

Query: 565 DGRDTRATYELMEDGATVHVLNETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLP 386
           +GR  +A Y LME+G    +  E  + G  + IEG A   +  ++ AKL+VKF    F+P
Sbjct: 58  NGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVN-LTEPAKLEVKF--SWFMP 114

Query: 385 IIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLWILCRKTHIEEEVYNQLLEKAKE 227
             P    YW+L  D +  YALV               WIL R  ++  E  + L      
Sbjct: 115 SAP----YWILATDYE-NYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTS 169

Query: 226 EGYDVAKLHKTPQSDPP 176
              DV K+  T Q + P
Sbjct: 170 NNIDVKKMTVTDQVNCP 186

>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
 Frame = -2

Query: 562 GRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLP 386
           G   +A Y LME+G  + VLN E    G  + IEG A +++  ++ AKL VKF+    +P
Sbjct: 60  GNCIQANYSLMENG-NIKVLNQELRPDGTVNQIEGQATQSN-LTEPAKLGVKFF--QLMP 115

Query: 385 IIPVVGDYWVLYVDDDYQYALVGEP-------RRKSLWILCRKTHIEEEVYNQLLEKAKE 227
             P    YWVL  D +  YALV              +WIL R  ++  E    L +    
Sbjct: 116 TAP----YWVLATDYE-NYALVYSCTTIIWLFHMDHVWILGRNRYLPPETVTYLKDILTA 170

Query: 226 EGYDVAKLHKTPQSDPP 176
              D+ K+  T Q + P
Sbjct: 171 NNIDIEKMTVTDQVNCP 187

>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)|
          Length = 189

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
 Frame = -2

Query: 562 GRDTRATYELMEDGATVHVLN-ETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLP 386
           G   +A Y LME+G  + VLN E    G  + +EG A K    S+ AKL+V+F+    +P
Sbjct: 59  GNCIQANYSLMENG-NIKVLNKELRPDGTLNQVEGEA-KQSNMSEPAKLEVQFF--SLMP 114

Query: 385 IIPVVGDYWVLYVDDDYQYALVGEPRR-------KSLWILCRKTHIEEEVYNQLLEKAKE 227
             P    YW+L  D +  YALV              +WIL R  ++  E    L      
Sbjct: 115 PAP----YWILATDYE-SYALVYSCTTFFWFFHVDYVWILGRNPYLPPETITYLKYILTS 169

Query: 226 EGYDVAKLHKTPQSDPP 176
              D+AK+    Q++ P
Sbjct: 170 NDIDIAKITTKDQANCP 186

>LAZA_SCHAM (P49291) Lazarillo protein precursor|
          Length = 214

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
 Frame = -2

Query: 517 TVHVLNETWSKGKRDYIEGTAYKADPASDEAKLKVKFYVPPFLPIIPVVGDYWVLYVD-D 341
           T H +N T          G A  A     + KL V F      P  P VG+YW+L  D D
Sbjct: 85  TTHEVNTT---------TGWAEFASELHTDGKLSVHF------PNSPSVGNYWILSTDYD 129

Query: 340 DYQ--YALVGEP----RRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQS 185
           +Y   ++ V  P      +  WIL R  +       ++ ++ K    D+ K  KT QS
Sbjct: 130 NYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTLERVEDELKNLQLDLNKYTKTEQS 187

>MATR3_RAT (P43244) Matrin-3 (Nuclear scaffold protein P130/MAT3)|
          Length = 845

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 328 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 152
           A+V    +K+LW   R   ++  E Y +L+ +    G D+ K  K+ +    P+G  +P+
Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606

Query: 151 DSK 143
           D K
Sbjct: 607 DKK 609

>MATR3_HUMAN (P43243) Matrin-3|
          Length = 847

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 328 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 152
           A+V    +K+LW   R   ++  E Y +L+ +    G D+ K  K+ +    P+G  +P+
Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606

Query: 151 DSK 143
           D K
Sbjct: 607 DKK 609

>MATR3_MOUSE (Q8K310) Matrin-3|
          Length = 846

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -2

Query: 328 ALVGEPRRKSLWILCRKTHIE-EEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPT 152
           A+V    +K+LW   R   ++  E Y +L+ +    G D+ K  K+ +    P+G  +P+
Sbjct: 547 AMVDHCLKKALWFQGRCVKVDLSEKYKKLVLRIPNRGIDLLKKDKSRKRSYSPDGKESPS 606

Query: 151 DSK 143
           D K
Sbjct: 607 DKK 609

>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty|
           acid omega-hydroxylase)
          Length = 513

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 295 WILCRKTHIEEEVYNQLLEKAKEEGYDVAK 206
           W+L + +H+E E+  ++  K++  GYD  K
Sbjct: 327 WLLSKHSHVENEILKEITGKSETVGYDEVK 356

>YR75_ECOLI (P21314) Hypothetical 36.8 kDa protein (ORF5) (Retron EC67)|
          Length = 326

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +3

Query: 27  YTKIDTDKHTSWLLQY----RPTSYTDG*TYHLPKSDLNHQ 137
           YT+   D  T W +QY    +P  +T G  +HL + D+N +
Sbjct: 133 YTRRGLDLDTYWFVQYGMTTQPYQFTKGSIFHLLEPDINQE 173

>AT1B4_HUMAN (Q9UN42) X/potassium-transporting ATPase beta-m chain (X,K-ATPase|
           beta-m subunit)
          Length = 357

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/71 (25%), Positives = 30/71 (42%)
 Frame = -2

Query: 337 YQYALVGEPRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYDVAKLHKTPQSDPPPEGDAA 158
           Y+Y L         ++   +   EEE    ++ K++EE  +  K  +  +     EG   
Sbjct: 17  YRYRLDDPDEANQNYLADEEEEAEEEARVTVVPKSEEEEEEEEKEEEEEEEKEEEEGQGQ 76

Query: 157 PTDSKGAWWFK 125
           PT +  AWW K
Sbjct: 77  PTGN--AWWQK 85

>C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-dependent fatty|
           acid omega-hydroxylase)
          Length = 514

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
 Frame = -2

Query: 295 WILCRKTHIEEEVYNQLLEKA--------KEEGYDVAKLHKTPQSDPPPEGDAAPTDSKG 140
           W+L +   +EEE+ N+L +K+        KE  Y  A L ++ +  PP      P DSK 
Sbjct: 329 WLLWKNPRVEEEIVNELSKKSELMVYDEVKEMVYTHAALSESMRLYPP-----VPMDSKE 383

Query: 139 A 137
           A
Sbjct: 384 A 384

>Y1163_AQUAE (O67227) Hypothetical protein aq_1163|
          Length = 125

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -2

Query: 376 VVGDYWVLYVDDDYQYALVGE---PRRKSLWILCRKTHIEEEVYNQLLEKAKEEGYD 215
           V G+ W++YVD    +A + E   PR ++ W   R   I E  +      ++EE YD
Sbjct: 61  VQGEGWIVYVDPFNNFADIYEANKPRYRNRWNQERPYDISETRFRVGFFPSREEAYD 117

>CGRF1_MOUSE (Q8BMJ7) Cell growth regulator with RING finger domain 1 (Cell|
           growth regulatory gene 19 protein)
          Length = 332

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = -2

Query: 274 HIEEEVYN-------QLLEKAKEEGYDVAKLHKTPQSDPPPEGDAAPTD 149
           HI ++ Y        Q L  A+ + YD+ +L  +  + PPP  D +P D
Sbjct: 198 HIPDKTYKLPCRILYQYLILAQGQFYDLKQLFMSANNSPPPSNDESPED 246

>NEBU_HUMAN (P20929) Nebulin|
          Length = 6669

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 280  KTHIEEEVYNQLLEKAKEEGYDV 212
            K +  E +Y Q +E+AK+EGYD+
Sbjct: 3236 KINYSESLYRQAMEEAKKEGYDL 3258


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,186,383
Number of Sequences: 219361
Number of extensions: 958789
Number of successful extensions: 4166
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)