| Clone Name | rbaal30l15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PDXS_HALMA (Q5V1G7) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-) | 28 | 5.0 | 2 | KISSR_HUMAN (Q969F8) KiSS-1 receptor (KiSS-1R) (Kisspeptins rece... | 28 | 8.6 |
|---|
>PDXS_HALMA (Q5V1G7) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)| Length = 302 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 3/21 (14%) Frame = +3 Query: 123 GAVAIRH---APADVRRRGGV 176 GAVA+ H PAD+R+RGGV Sbjct: 46 GAVAVMHLESVPADIRKRGGV 66
>KISSR_HUMAN (Q969F8) KiSS-1 receptor (KiSS-1R) (Kisspeptins receptor) (Metastin| receptor) (G-protein coupled receptor 54) (Hypogonadotropin-1) (hOT7T175) Length = 398 Score = 27.7 bits (60), Expect = 8.6 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 123 GAVAIRHAPADVRRRGGVDAELPGAV 200 G VA+R APAD +G V AE GAV Sbjct: 232 GRVAVRPAPADSALQGQVLAERAGAV 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,278,102 Number of Sequences: 219361 Number of extensions: 327698 Number of successful extensions: 903 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 901 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 903 length of database: 80,573,946 effective HSP length: 44 effective length of database: 70,922,062 effective search space used: 1702129488 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)