ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal31a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PDK2_RAT (Q64536) [Pyruvate dehydrogenase [lipoamide]] kinase is... 75 5e-14
2PDK2_MOUSE (Q9JK42) [Pyruvate dehydrogenase [lipoamide]] kinase ... 75 5e-14
3PDK2_HUMAN (Q15119) [Pyruvate dehydrogenase [lipoamide]] kinase ... 75 5e-14
4PDK1_HUMAN (Q15118) [Pyruvate dehydrogenase [lipoamide]] kinase ... 73 2e-13
5PDK1_MOUSE (Q8BFP9) [Pyruvate dehydrogenase [lipoamide]] kinase ... 72 4e-13
6PDK1_RAT (Q63065) [Pyruvate dehydrogenase [lipoamide]] kinase is... 72 5e-13
7PDK3_MOUSE (Q922H2) [Pyruvate dehydrogenase [lipoamide]] kinase ... 71 9e-13
8PDK3_HUMAN (Q15120) [Pyruvate dehydrogenase [lipoamide]] kinase ... 71 9e-13
9PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, ... 68 6e-12
10PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase ... 68 7e-12
11PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase ... 68 7e-12
12PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase is... 67 9e-12
13PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase ... 66 2e-11
14PDK_DROME (P91622) [Pyruvate dehydrogenase [lipoamide]] kinase, ... 65 6e-11
15PDK_CAEEL (Q02332) Probable [pyruvate dehydrogenase [lipoamide]]... 63 2e-10
16BCKD_HUMAN (O14874) [3-methyl-2-oxobutanoate dehydrogenase [lipo... 57 1e-08
17BCKD_RAT (Q00972) [3-methyl-2-oxobutanoate dehydrogenase [lipoam... 57 1e-08
18BCKD_MOUSE (O55028) [3-methyl-2-oxobutanoate dehydrogenase [lipo... 57 1e-08
19YIE2_YEAST (P40530) Hypothetical 45.4 kDa protein in CBR5-NOT3 i... 40 0.001
20YGF9_YEAST (P53170) Probable protein kinase YGL059W (EC 2.7.11.-) 40 0.002
21ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein a... 31 0.75
22ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein a... 31 0.75
23ARCB_ECO57 (P58363) Aerobic respiration control sensor protein a... 31 0.75
24US12_HCMVA (P09721) Hypothetical protein HVLF6 30 1.3
25ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase... 30 1.7
26SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 30 2.2
27SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 2.8
28SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 29 2.8
29SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precurs... 28 4.8

>PDK2_RAT (Q64536) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2) (PDK P45)
          Length = 407

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y+YS A   P  +  + G  +AG+G+GLP+SRLYA Y  GDLQ+ SMEG+G DA +
Sbjct: 302 RLFSYMYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358

Query: 55  HLSRLG-DSEEPLPXW 11
           +L  L  DS E LP +
Sbjct: 359 YLKALSTDSVERLPVY 374



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>PDK2_MOUSE (Q9JK42) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2)
          Length = 407

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y+YS A   P  +  + G  +AG+G+GLP+SRLYA Y  GDLQ+ SMEG+G DA +
Sbjct: 302 RLFSYMYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358

Query: 55  HLSRLG-DSEEPLPXW 11
           +L  L  DS E LP +
Sbjct: 359 YLKALSTDSVERLPVY 374



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>PDK2_HUMAN (Q15119) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 2)
          Length = 407

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y+YS A   P  +  + G  +AG+G+GLP+SRLYA Y  GDLQ+ SMEG+G DA +
Sbjct: 302 RLFSYMYSTA---PTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358

Query: 55  HLSRLG-DSEEPLPXW 11
           +L  L  DS E LP +
Sbjct: 359 YLKALSTDSVERLPVY 374



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>PDK1_HUMAN (Q15118) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1)
          Length = 436

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F Y+YS A   P +E  S  V +AG+G+GLP+SRLYA Y  GDL++ S+EGYG DA +
Sbjct: 330 RLFNYMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVI 387

Query: 55  HLSRLG-DSEEPLPXW 11
           ++  L  DS E LP +
Sbjct: 388 YIKALSTDSIERLPVY 403



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>PDK1_MOUSE (Q8BFP9) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1)
          Length = 434

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F Y+YS A   P +E  S  V +AG+G+GLP+SRLYA Y  GDL++ S+EGYG DA +
Sbjct: 328 RLFNYMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVI 385

Query: 55  HLSRLG-DSEEPLPXW 11
           ++  L  +S E LP +
Sbjct: 386 YIKALSTESVERLPVY 401



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>PDK1_RAT (Q63065) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 1) (PDK p48)
          Length = 434

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F Y+YS A   P +E  S  V +AG+G+GLP+SRLYA Y  GDL++ S+EGYG DA +
Sbjct: 328 RLFNYMYSTAPR-PRVE-TSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVI 385

Query: 55  HLSRLG-DSEEPLPXW 11
           ++  L  +S E LP +
Sbjct: 386 YIKALSTESIERLPVY 401



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>PDK3_MOUSE (Q922H2) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 3)
          Length = 415

 Score = 70.9 bits (172), Expect = 9e-13
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F Y+YS A   P +E P+    +AG+G+GLP+SRLYA Y  GDL++ SMEG G DA +
Sbjct: 299 RLFNYMYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 356

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 357 YLKALSSESFERLP 370



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>PDK3_HUMAN (Q15120) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 3)
          Length = 406

 Score = 70.9 bits (172), Expect = 9e-13
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F Y+YS A   P +E P+    +AG+G+GLP+SRLYA Y  GDL++ SMEG G DA +
Sbjct: 299 RLFNYMYSTAPR-PSLE-PTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 356

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 357 YLKALSSESFERLP 370



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>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
          Length = 399

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+FTY+YS A   P  +G      +AGYG+GLP+SRLYA Y  GD+ ++SMEGYG DA +
Sbjct: 298 RLFTYMYSTAPP-PPRDGTQP--PLAGYGYGLPLSRLYARYFHGDMYLVSMEGYGTDAMI 354

Query: 55  HLSRLG-DSEEPLPXW 11
            L  +  ++ E LP +
Sbjct: 355 FLKAIPVEASEVLPIY 370



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>PDK4_SPETR (O88345) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y+YS A     +   S    +AG+G+GLP+SRLYA Y  GDL + S+ GYG DA +
Sbjct: 305 RLFSYMYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAII 362

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 363 YLKALSSESVEKLP 376



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>PDK4_MOUSE (O70571) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y YS A     +   S    +AG+G+GLP+SRLYA Y  GDL + SM GYG DA +
Sbjct: 305 RLFSYTYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAII 362

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 363 YLKALSSESVEKLP 376



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>PDK4_RAT (O54937) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 412

 Score = 67.4 bits (163), Expect = 9e-12
 Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y YS A     +   S    +AG+G+GLP+SRLYA Y  GDL + SM GYG DA +
Sbjct: 305 RLFSYTYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSMSGYGTDAII 362

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 363 YLKALSSESIEKLP 376



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>PDK4_HUMAN (Q16654) [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase isoform 4)
          Length = 411

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R+F+Y YS A     +   S    +AG+G+GLP+SRLYA Y  GDL + S+ GYG DA +
Sbjct: 305 RLFSYTYSTAPT--PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAII 362

Query: 55  HLSRL-GDSEEPLP 17
           +L  L  +S E LP
Sbjct: 363 YLKALSSESIEKLP 376



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>PDK_DROME (P91622) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
           (DmPDK)
          Length = 413

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEG----VTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGA 68
           ++F Y+YS A        PS+     V +AGYG+GLP+SRLYA Y  GD+ ++S EG+G 
Sbjct: 306 QLFKYMYSTAPQ------PSKSDLHTVPLAGYGYGLPISRLYARYFHGDIVLLSCEGFGT 359

Query: 67  DAYLHLSRLGDSEEPL 20
           DA ++L  L D    L
Sbjct: 360 DAIIYLKALSDEANEL 375



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>PDK_CAEEL (Q02332) Probable [pyruvate dehydrogenase [lipoamide]] kinase,|
           mitochondrial precursor (EC 2.7.11.2) (Pyruvate
           dehydrogenase kinase)
          Length = 401

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYL 56
           R++ Y+YS A   P  +G      +AGYG+GLP+SRLYA Y  GDL ++SMEG+G DA +
Sbjct: 298 RLYNYMYSTAPP-PPRDGTQ--APLAGYGYGLPLSRLYARYFLGDLFLVSMEGHGTDACI 354

Query: 55  HLSRLG-DSEEPLPXW 11
           +L  +  ++ E LP +
Sbjct: 355 YLKAVPVEASEVLPIY 370



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>BCKD_HUMAN (O14874) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 26/56 (46%), Positives = 34/56 (60%)
 Frame = -2

Query: 193 DIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           D+   ++   M G+GFGLP SR YA Y GG LQ+ S++G G D YL L  +   EE
Sbjct: 353 DMHSGAQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREE 408



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>BCKD_RAT (Q00972) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 26/56 (46%), Positives = 33/56 (58%)
 Frame = -2

Query: 193 DIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           D+    +   M G+GFGLP SR YA Y GG LQ+ S++G G D YL L  +   EE
Sbjct: 353 DMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREE 408



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>BCKD_MOUSE (O55028) [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]]|
           kinase, mitochondrial precursor (EC 2.7.11.4)
           (Branched-chain alpha-ketoacid dehydrogenase kinase)
           (BCKDHKIN) (BCKD-kinase)
          Length = 412

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 26/56 (46%), Positives = 33/56 (58%)
 Frame = -2

Query: 193 DIEGPSEGVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           D+    +   M G+GFGLP SR YA Y GG LQ+ S++G G D YL L  +   EE
Sbjct: 353 DMHSGGQSGPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREE 408



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>YIE2_YEAST (P40530) Hypothetical 45.4 kDa protein in CBR5-NOT3 intergenic|
           region
          Length = 394

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
 Frame = -2

Query: 232 IFTYLYSX-AKNLPDIEG---PSEGVT-MAGYGFGLPVSRLYAXYXGGDLQIISMEGYGA 68
           +F Y YS   +   D E    P E +  ++G GFGLP+ + Y    GG + + S+ G+G 
Sbjct: 317 MFNYSYSTHTQQSADSESTDLPGEQINNVSGMGFGLPMCKTYLELFGGKIDVQSLLGWGT 376

Query: 67  DAYLHL 50
           D Y+ L
Sbjct: 377 DVYIKL 382



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>YGF9_YEAST (P53170) Probable protein kinase YGL059W (EC 2.7.11.-)|
          Length = 491

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -2

Query: 151 GFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRL 41
           G GL + ++YA Y  GDL + SM GYG D  L L  L
Sbjct: 443 GIGLAMCKVYAEYWNGDLSLHSMPGYGTDVVLKLGNL 479



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>ARCB_SHIFL (P0AEC4) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 172 GVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           G    G G GL VSR  A   GGD+ + S +G G+   L +     +EE
Sbjct: 463 GKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEE 511



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>ARCB_ECOLI (P0AEC3) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 172 GVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           G    G G GL VSR  A   GGD+ + S +G G+   L +     +EE
Sbjct: 463 GKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEE 511



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>ARCB_ECO57 (P58363) Aerobic respiration control sensor protein arcB (EC|
           2.7.13.3)
          Length = 778

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -2

Query: 172 GVTMAGYGFGLPVSRLYAXYXGGDLQIISMEGYGADAYLHLSRLGDSEE 26
           G    G G GL VSR  A   GGD+ + S +G G+   L +     +EE
Sbjct: 463 GKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSVAEE 511



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>US12_HCMVA (P09721) Hypothetical protein HVLF6|
          Length = 281

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
 Frame = -3

Query: 177 VKE*LWLDMVLXFQLVAFMRXIXVAT---YKSYPWRDTAPMLTSTCHGWET 34
           V+  LW  MV  +  V F     +AT   +   PWR TAP L  T   W T
Sbjct: 46  VQHFLW--MVRLYGTVVFQTSATIATTILFMLIPWRVTAPYLRDTLPFWST 94



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>ATOS_ECOLI (Q06067) Signal transduction histidine-protein kinase atoS (EC|
           2.7.13.3)
          Length = 608

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 15/71 (21%)
 Frame = -2

Query: 235 RIFTYLYSXAKNLPDIEGPSEGVTMA---------------GYGFGLPVSRLYAXYXGGD 101
           RI T+ YS ++    IE    G+ ++               G G GL +S+       GD
Sbjct: 522 RIQTWQYSDSQQAISIEDNGCGIDLSLQKKIFDPFFTTKASGTGLGLALSQRIINAHQGD 581

Query: 100 LQIISMEGYGA 68
           +++ S+ GYGA
Sbjct: 582 IRVASLPGYGA 592



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>SYA_MOUSE (Q8BGQ7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 148 FGLPVSRLYAXYXGGD 101
           FG+PV RLY  Y GGD
Sbjct: 126 FGIPVERLYVTYFGGD 141



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>SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 148 FGLPVSRLYAXYXGGD 101
           FG+P+ RLY  Y GGD
Sbjct: 126 FGIPIERLYVTYFGGD 141



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>SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS) (NY-REN-42 antigen)
          Length = 968

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 148 FGLPVSRLYAXYXGGD 101
           FG+P+ RLY  Y GGD
Sbjct: 126 FGIPIERLYVTYFGGD 141



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>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.7) (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 148 FGLPVSRLYAXYXGGD 101
           +GLP  R+YA Y GGD
Sbjct: 180 YGLPTDRIYATYFGGD 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,259,921
Number of Sequences: 219361
Number of extensions: 662563
Number of successful extensions: 1509
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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