>FADJ_PHOPR (Q6LTK3) Fatty acid oxidation complex alpha subunit [Includes:|
           Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA
           dehydrogenase (EC 1.1.1.35); 3-hydroxybutyryl-CoA
           epimerase (EC 5.1.2.3)]
          Length = 715

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
 Frame = -1

Query: 438 ITSLDELKTKVGHVIVMILLVKMFERSKMVKITTGLDLLSYSVCIFLSSASLYILHNLHR 259
           IT LDE+   +G  I  ILL ++ ER K   +    DLL         S   + L+N  +
Sbjct: 546 ITLLDEVGVDIGAKISPILLAELGERFKAPDV---FDLLLSDDRKGRKSGKGFYLYNTKK 602

Query: 258 PEHEESVMPHL*LNRASRSS-DAMASWCSCRLVSD--RCID 145
            E ++SV   L L    +++   +A  C+  ++++  RC+D
Sbjct: 603 KEVDKSVYKLLSLEPEQKAAGQDIALRCTLMMLNEAARCLD 643

>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = -3

Query: 553 RAVHQQRVQRSAFRIRPGSARIVAVRDVRSEGEAEVDEDHVPGRAQDQGWARHRDDPAGE 374
           R + Q + + S+    P     V V    +  E + D++  PG  +D   A HR D  GE
Sbjct: 667 RVLPQTKAESSSDEEEPAELPAVTVTPAPAP-EDKGDQEEDPGCQEDVDEAEHRGDMTGE 725

Query: 373 DVRAEQDGE 347
           +   E + E
Sbjct: 726 EGERETEAE 734


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,212,320
Number of Sequences: 219361
Number of extensions: 1430985
Number of successful extensions: 4437
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4436
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)