ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal30k08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 115 bits (58), Expect = 8e-23 Identities = 70/74 (94%) Strand = Plus / Minus Query: 186 gatcttcacgtccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacga 245 |||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||| Sbjct: 103907 gatcttcacgtcagggttgcgcaacggcttgagccacatgtcggccatcaccctcgacga 103848 Query: 246 catgctccagagca 259 |||||||||||||| Sbjct: 103847 catgctccagagca 103834
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 115 bits (58), Expect = 8e-23 Identities = 70/74 (94%) Strand = Plus / Minus Query: 186 gatcttcacgtccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacga 245 |||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||| Sbjct: 21647281 gatcttcacgtcagggttgcgcaacggcttgagccacatgtcggccatcaccctcgacga 21647222 Query: 246 catgctccagagca 259 |||||||||||||| Sbjct: 21647221 catgctccagagca 21647208
>dbj|AK099586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042N12, full insert sequence Length = 3025 Score = 115 bits (58), Expect = 8e-23 Identities = 70/74 (94%) Strand = Plus / Minus Query: 186 gatcttcacgtccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacga 245 |||||||||||| |||||||||| ||||||||||||||||||||| | |||||||||||| Sbjct: 2734 gatcttcacgtcagggttgcgcaacggcttgagccacatgtcggccatcaccctcgacga 2675 Query: 246 catgctccagagca 259 |||||||||||||| Sbjct: 2674 catgctccagagca 2661
>ref|NM_197572.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0064P21.6), mRNA Length = 2499 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 196 tccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacgacatgctcca 254 ||||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 2450 tccgggttgcgcaccgtcttgagccacatcccggcgagcacccgcgacgacaagctcca 2392
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 196 tccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacgacatgctcca 254 ||||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 24842 tccgggttgcgcaccgtcttgagccacatcccggcgagcacccgcgacgacaagctcca 24784
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 196 tccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacgacatgctcca 254 ||||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 20519552 tccgggttgcgcaccgtcttgagccacatcccggcgagcacccgcgacgacaagctcca 20519494
>dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C17, full insert sequence Length = 2784 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 196 tccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacgacatgctcca 254 ||||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 2487 tccgggttgcgcaccgtcttgagccacatcccggcgagcacccgcgacgacaagctcca 2429
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 196 tccgggttgcgcatcggcttgagccacatgtcggcgaccaccctcgacgacatgctcca 254 ||||||||||||| || |||||||||||| |||||| ||||| |||||||| |||||| Sbjct: 20530824 tccgggttgcgcaccgtcttgagccacatcccggcgagcacccgcgacgacaagctcca 20530766
>gb|AY358430.1| Homo sapiens clone DNA56045 ATGT502 (UNQ502) mRNA, complete cds Length = 1071 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 279 cgccctcgtgccgcctcgtgccg 301 ||||||||||||||||||||||| Sbjct: 36 cgccctcgtgccgcctcgtgccg 14
>gb|AF293359.1|AF293359 Homo sapiens desmocollin 3 (DSC3) gene, complete cds, alternatively spliced Length = 49087 Score = 46.1 bits (23), Expect = 0.064 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 ttatttatttaaaaattacttac 29 ||||||||||||||||||||||| Sbjct: 41090 ttatttatttaaaaattacttac 41068
>emb|CR407556.7| Zebrafish DNA sequence from clone DKEY-255P24 in linkage group 16, complete sequence Length = 30724 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ttacatttttcctgttacaaat 90 |||||||||||||||||||||| Sbjct: 18118 ttacatttttcctgttacaaat 18139
>emb|BX572627.5| Zebrafish DNA sequence from clone CH211-222M21 in linkage group 9, complete sequence Length = 209758 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 atattatttatttaaaaattac 25 |||||||||||||||||||||| Sbjct: 192515 atattatttatttaaaaattac 192536
>dbj|AB225527.1| Aspergillus oryzae cDNA, contig sequence: AoEST2380 Length = 1085 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 gccctcgtgccgcctcgtgccg 301 |||||||||||||||||||||| Sbjct: 46 gccctcgtgccgcctcgtgccg 25 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 34 cctcgtgccgcctcgtgccg 15
>gb|AC183494.1| Brassica oleracea Contig C, complete sequence Length = 285752 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaatt 23 |||||||||||||||||||||| Sbjct: 90516 ttatattatttatttaaaaatt 90495
>gb|AC025212.5|AC025212 Homo sapiens chromosome 18, clone RP11-289A1, complete sequence Length = 182258 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 tatttatttaaaaattacttac 29 |||||||||||||||||||||| Sbjct: 139503 tatttatttaaaaattacttac 139524
>gb|AY708106.1| Caridina sp. FB-26 isolate 2277Ind 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 1337 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 atttatttaaaaattacttaca 30 |||||||||||||||||||||| Sbjct: 629 atttatttaaaaattacttaca 650
>gb|AY708102.1| Caridina sp. FB-25 isolate 2266Ind 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 1337 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 atttatttaaaaattacttaca 30 |||||||||||||||||||||| Sbjct: 629 atttatttaaaaattacttaca 650
>gb|AY708096.1| Caridina sp. FB-24 isolate 2260Ind 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 1330 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 atttatttaaaaattacttaca 30 |||||||||||||||||||||| Sbjct: 622 atttatttaaaaattacttaca 643
>gb|AF053454.1|AF053454 Mus musculus tetraspan TM4SF (Tspan-6) mRNA, complete cds Length = 1058 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 gccctcgtgccgcctcgtgccg 301 |||||||||||||||||||||| Sbjct: 43 gccctcgtgccgcctcgtgccg 22
>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence Length = 203360 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaatt 23 |||||||||||||||||||||| Sbjct: 3730 ttatattatttatttaaaaatt 3709
>emb|AL928730.7| Mouse DNA sequence from clone RP23-186A19 on chromosome X, complete sequence Length = 188862 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 atattatttatttaaaaattacttac 29 ||||||||| |||||||||||||||| Sbjct: 57989 atattatttttttaaaaattacttac 58014
>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 251631 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tttatttaaaaattacttaca 30 ||||||||||||||||||||| Sbjct: 60436 tttatttaaaaattacttaca 60416
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 310917 ttatattatttatttaaaaat 310937
>gb|AC110513.6| Mus musculus chromosome 3, clone RP24-147L5, complete sequence Length = 154446 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaattac 25 ||||||||||||||||||||| Sbjct: 48818 tattatttatttaaaaattac 48798
>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence Length = 218138 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ccaccctcgacgacatgctcc 253 ||||||||||||||||||||| Sbjct: 102700 ccaccctcgacgacatgctcc 102680
>gb|DQ185390.1| Pseudocohnilembus persalinus beta-tubulin (BTU) mRNA, complete cds Length = 1453 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaatt 23 ||||||||||||||||||||| Sbjct: 59 tatattatttatttaaaaatt 39
>gb|AY741431.1| Xerolenta obvia voucher FG 12529 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 384 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 tatttatttaaaaattactta 28 ||||||||||||||||||||| Sbjct: 79 tatttatttaaaaattactta 99
>gb|AY741430.1| Xeromunda sp. FG 8681 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 382 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 tatttatttaaaaattactta 28 ||||||||||||||||||||| Sbjct: 79 tatttatttaaaaattactta 99
>gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome 6, complete sequence Length = 185160 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ccaccctcgacgacatgctcc 253 ||||||||||||||||||||| Sbjct: 9671 ccaccctcgacgacatgctcc 9651
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 ccaccctcgacgacatgctcc 253 ||||||||||||||||||||| Sbjct: 81433 ccaccctcgacgacatgctcc 81413
>emb|CR456631.7| Zebrafish DNA sequence from clone DKEY-101N15 in linkage group 12, complete sequence Length = 92620 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 atattatttatttaaaaatta 24 ||||||||||||||||||||| Sbjct: 25651 atattatttatttaaaaatta 25671
>ref|XM_724972.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02197) partial mRNA Length = 1263 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tatattatttatttaaaaatt 23 ||||||||||||||||||||| Sbjct: 785 tatattatttatttaaaaatt 805
>gb|AC010099.10| Homo sapiens BAC clone RP11-420H19 from 7, complete sequence Length = 154836 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatta 24 ||||||||||||||||||||| Sbjct: 123420 atattatttatttaaaaatta 123400
>gb|AF500790.1| Piromyces sp. E2 clone 25 cellobiohydrolase Cel6C gene, partial cds Length = 1748 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatta 24 ||||||||||||||||||||| Sbjct: 194 atattatttatttaaaaatta 174
>emb|AL583853.6| Human DNA sequence from clone RP11-139I17 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM), complete sequence Length = 169288 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 116893 ttatattatttatttaaaaat 116913
>emb|AL358937.16| Human DNA sequence from clone RP11-60I3 on chromosome 9 Contains the 3' end of the NR4A3 gene for nuclear receptor subfamily 4 group A member 3, the STX17 gene for syntaxin 17, the 3' end of the TXNDC4 gene for thioredoxin domain containing 4 (endoplasmic reticulum) (ERP44, ERp44,KIAA0573) and a CpG island, complete sequence Length = 146889 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaattac 25 ||||||||||||||||||||| Sbjct: 50678 tattatttatttaaaaattac 50658
>emb|AL136443.11| Human DNA sequence from clone RP3-342H9 on chromosome 6 Contains a CpG island, complete sequence Length = 74354 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 15671 ttatattatttatttaaaaat 15691
>emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in linkage group 5, complete sequence Length = 255113 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 aaattacttacagcattctca 39 ||||||||||||||||||||| Sbjct: 144078 aaattacttacagcattctca 144058
>emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in linkage group 5, complete sequence Length = 117261 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 aaattacttacagcattctca 39 ||||||||||||||||||||| Sbjct: 8149 aaattacttacagcattctca 8169
>dbj|AK124319.1| Homo sapiens cDNA FLJ42328 fis, clone TRACH3000530 Length = 3316 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ttatttatttaaaaattactt 27 ||||||||||||||||||||| Sbjct: 2049 ttatttatttaaaaattactt 2069
>emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in linkage group 18, complete sequence Length = 232903 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 atattatttatttaaaaatta 24 ||||||||||||||||||||| Sbjct: 118874 atattatttatttaaaaatta 118894
>gb|AC008639.8| Homo sapiens chromosome 5 clone CTB-179J16, complete sequence Length = 108337 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ttatttatttaaaaattactt 27 ||||||||||||||||||||| Sbjct: 53605 ttatttatttaaaaattactt 53585
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 tgtcgttcccggccttcgccg 280 ||||||||||||||||||||| Sbjct: 2662075 tgtcgttcccggccttcgccg 2662055
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cgccgccctcgtgccgcctcg 296 ||||||||||||||||||||| Sbjct: 3480312 cgccgccctcgtgccgcctcg 3480292
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatta 24 ||||||||||||||||||||| Sbjct: 103972 atattatttatttaaaaatta 103952
>gb|AE009725.1| Brucella melitensis 16M chromosome II, section 87 of 107 of the complete sequence Length = 12530 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 8628 ttatattatttatttaaaaat 8608
>gb|AC010854.3|AC010854 Homo sapiens chromosome 18, clone RP11-349N23, complete sequence Length = 169682 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ttatttatttaaaaattactt 27 ||||||||||||||||||||| Sbjct: 130909 ttatttatttaaaaattactt 130889
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 860727 ttatattatttatttaaaaat 860707
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cgccgccctcgtgccgcctcg 296 ||||||||||||||||||||| Sbjct: 97016 cgccgccctcgtgccgcctcg 96996
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaat 22 ||||||||||||||||||||| Sbjct: 860706 ttatattatttatttaaaaat 860686
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 atattatttatttaaaaattactt 27 ||||| |||||||||||||||||| Sbjct: 1598890 atattttttatttaaaaattactt 1598867
>gb|AC152958.1| Mus musculus 6 BAC RP23-301K21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182995 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tatttatttaaaaattacttacag 31 |||||||||||||| ||||||||| Sbjct: 154646 tatttatttaaaaagtacttacag 154623
>ref|XM_642467.1| Dictyostelium discoideum hypothetical protein (DDB0202223), partial mRNA Length = 2895 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 514 tattatttatttaaaaatta 533
>ref|XM_634791.1| Dictyostelium discoideum hypothetical protein (DDB0218676), partial mRNA Length = 2406 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 496 tattatttatttaaaaatta 515
>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence Length = 239149 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 4 atattatttatttaaaaattactt 27 |||||| ||||||||||||||||| Sbjct: 52687 atattagttatttaaaaattactt 52710
>gb|AC160845.1| Homo sapiens chromosome 2 clone fa0885, complete sequence Length = 43237 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tatttatttaaaaattacttacag 31 ||||||||||||||||| |||||| Sbjct: 39350 tatttatttaaaaattatttacag 39373
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 360704 tatattatttatttaaaaat 360685
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 cgatcttcacgtccgggttg 204 |||||||||||||||||||| Sbjct: 1253257 cgatcttcacgtccgggttg 1253276
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 106208 cgttcccggccttcgccgcc 106227
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tatttatttaaaaattactt 27 |||||||||||||||||||| Sbjct: 996141 tatttatttaaaaattactt 996160
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 5482 cgttcccggccttcgccgcc 5501
>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence Length = 184662 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 134898 ttatattatttatttaaaaa 134879
>gb|AC124327.9| Mus musculus chromosome 8, clone RP24-490I13, complete sequence Length = 141781 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatt 23 |||||||||||||||||||| Sbjct: 55787 atattatttatttaaaaatt 55768
>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete sequence Length = 178560 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 cttatattatttatttaaaaatta 24 ||||||||||| |||||||||||| Sbjct: 56529 cttatattattaatttaaaaatta 56506
>gb|AY523941.1| Anas platyrhynchos cyclin-dependent kinase inhibitor p27 Kip1 mRNA, complete cds Length = 803 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccctcgtgccgcctcgtgcc 300 |||||||||||||||||||| Sbjct: 20 ccctcgtgccgcctcgtgcc 1
>gb|AY189286.1| Homo sapiens LP5910 protein mRNA, complete cds Length = 3260 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 2185 cctcgtgccgcctcgtgccg 2166
>emb|CR450748.10| Zebrafish DNA sequence from clone CH211-157P5, complete sequence Length = 191667 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 181820 tatattatttatttaaaaat 181801
>emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in linkage group 1, complete sequence Length = 169443 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 136243 tattatttatttaaaaatta 136224
>gb|AC148562.3| Callicebus moloch clone LB5-363C5, complete sequence Length = 217859 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 126160 tatattatttatttaaaaat 126141
>emb|AL357497.17| Human DNA sequence from clone RP11-637O19 on chromosome 6 Contains the 5' end of the GCMB gene for glial cells missing (Drosophila) homolog b, a novel gene, the 5' end of the gene for a novel protein similar to synaptonemal complex protein 2 (SYCP2) and a CpG island, complete sequence Length = 82952 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 atattatttatttaaaaatt 23 |||||||||||||||||||| Sbjct: 31076 atattatttatttaaaaatt 31095
>gb|AC142122.2| Homo sapiens fosmid clone XXFOS-8870E5 from 2, complete sequence Length = 37069 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tatttatttaaaaattacttacag 31 ||||||||||||||||| |||||| Sbjct: 33720 tatttatttaaaaattatttacag 33743
>emb|AL034558.3|PFMAL3P2 Plasmodium falciparum MAL3P2, complete sequence Length = 158548 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 2716 tatattatttatttaaaaat 2697
>emb|CR762497.17| Zebrafish DNA sequence from clone DKEY-162B3 in linkage group 13, complete sequence Length = 258636 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 153172 ttatattatttatttaaaaa 153153
>gb|AC146675.3| Callithrix jacchus clone CH259-444F21, complete sequence Length = 188829 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 31099 tatattatttatttaaaaat 31080
>gb|AC182361.3| Spermophilus tridecemlineatus clone VMRC20-433G18, complete sequence Length = 140138 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tttatttaaaaattacttac 29 |||||||||||||||||||| Sbjct: 77673 tttatttaaaaattacttac 77692
>dbj|AB229152.1| Aspergillus oryzae cDNA, contig sequence: AoEST6030 Length = 425 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 20 cctcgtgccgcctcgtgccg 1
>dbj|AB228634.1| Aspergillus oryzae cDNA, contig sequence: AoEST5507 Length = 891 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 34 cctcgtgccgcctcgtgccg 15
>dbj|AB228286.1| Aspergillus oryzae cDNA, contig sequence: AoEST5159 Length = 503 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 20 cctcgtgccgcctcgtgccg 1
>dbj|AB226304.1| Aspergillus oryzae cDNA, contig sequence: AoEST3166 Length = 1214 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 25 cctcgtgccgcctcgtgccg 6
>dbj|AB226153.1| Aspergillus oryzae cDNA, contig sequence: AoEST3011 Length = 704 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 34 cctcgtgccgcctcgtgccg 15
>dbj|AB226023.1| Aspergillus oryzae cDNA, contig sequence: AoEST2879 Length = 944 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 75 cctcgtgccgcctcgtgccg 56
>dbj|AB225571.1| Aspergillus oryzae cDNA, contig sequence: AoEST2426 Length = 1361 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 1328 cctcgtgccgcctcgtgccg 1347
>ref|NM_141899.2| Drosophila melanogaster CG4702-RA (CG4702), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 1270 ttatattatttatttaaaaa 1289
>gb|AC023281.13| Homo sapiens 12p BAC RP11-780A5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145410 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 21152 tattatttatttaaaaatta 21171
>gb|DP000050.1| Felis catus target 126 genomic scaffold Length = 269350 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 258258 ttatattatttatttaaaaa 258277
>gb|AY058708.1| Drosophila melanogaster LD43816 full length cDNA Length = 1354 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 1235 ttatattatttatttaaaaa 1254
>gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159386 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 142380 ttatattatttatttaaaaa 142361
>gb|BC032986.1| Mus musculus superoxide dismutase 1, soluble, mRNA (cDNA clone IMAGE:1313787) Length = 698 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 20 cctcgtgccgcctcgtgccg 1
>emb|AL114979.1|CNS01C23 Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 1 cctcgtgccgcctcgtgccg 20
>emb|AL114418.1|CNS01BMI Botrytis cinerea strain T4 cDNA library Length = 696 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 228 cctcgtgccgcctcgtgccg 209
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 19302133 cgttcccggccttcgccgcc 19302152
>gb|AC159746.5| Mus musculus 6 BAC RP23-437F11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 171039 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tatttatttaaaaattacttacag 31 |||||||||||||| ||||||||| Sbjct: 2403 tatttatttaaaaagtacttacag 2380
>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete sequence Length = 192026 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatt 23 |||||||||||||||||||| Sbjct: 113580 atattatttatttaaaaatt 113561
>gb|AC019196.10| Homo sapiens BAC clone RP11-356G6 from 2, complete sequence Length = 175504 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 121904 tattatttatttaaaaatta 121885
>gb|AC116030.2| Dictyostelium discoideum chromosome 2 map 2090851-209760 strain AX4, complete sequence Length = 6750 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 6630 tattatttatttaaaaatta 6611
>gb|AF204172.1|AF204172 Homo sapiens clone IMAGE:298343 popeye protein 1 (POP1) mRNA, complete cds Length = 1687 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 1663 cctcgtgccgcctcgtgccg 1682
>emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in linkage group 5, complete sequence Length = 151863 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 58029 ttatattatttatttaaaaa 58048
>emb|AJ338234.1|HSA338234 Homo sapiens genomic sequence surrounding NotI site, clone HSJ41-859R Length = 835 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgatcttcacgtccgggttg 204 |||||||||||||||||||| Sbjct: 244 cgatcttcacgtccgggttg 225
>emb|AJ339880.1|HSA339880 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DE5R Length = 848 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 599 ttatattatttatttaaaaa 580
>emb|AJ341934.1|HSA341934 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-DJ1RS Length = 771 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgatcttcacgtccgggttg 204 |||||||||||||||||||| Sbjct: 244 cgatcttcacgtccgggttg 225
>dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086B11, full insert sequence Length = 1305 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 479 cgttcccggccttcgccgcc 498
>emb|BX537286.4| Zebrafish DNA sequence from clone DKEY-28J4 in linkage group 4, complete sequence Length = 179930 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 166910 ttatattatttatttaaaaa 166929
>emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in linkage group 1, complete sequence Length = 170985 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 132807 tattatttatttaaaaatta 132788
>emb|CT573052.2| Medicago truncatula chromosome 5 clone mth2-60f21, COMPLETE SEQUENCE Length = 131869 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 atattatttatttaaaaatt 23 |||||||||||||||||||| Sbjct: 50849 atattatttatttaaaaatt 50868
>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the complete sequence Length = 226075 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 143859 ttatattatttatttaaaaa 143840
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cctcgtgccgcctcgtgccg 301 |||||||||||||||||||| Sbjct: 35 cctcgtgccgcctcgtgccg 16
>emb|CR385071.9| Zebrafish DNA sequence from clone CH211-245B7 in linkage group 24, complete sequence Length = 160655 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 atattatttatttaaaaattactt 27 |||||||||||||||||| ||||| Sbjct: 104455 atattatttatttaaaaaatactt 104432
>dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia1d mRNA for chitinase, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 466 cgttcccggccttcgccgcc 485
>dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-427G12, complete sequence Length = 140000 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 atattatttatttaaaaatt 23 |||||||||||||||||||| Sbjct: 68693 atattatttatttaaaaatt 68674
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 1201642 tatattatttatttaaaaat 1201623
>emb|CR376732.12| Zebrafish DNA sequence from clone DKEY-146H23 in linkage group 3, complete sequence Length = 171210 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 65004 tatattatttatttaaaaat 64985
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tatttatttaaaaattactt 27 |||||||||||||||||||| Sbjct: 1082605 tatttatttaaaaattactt 1082624
>emb|AL935206.8| Zebrafish DNA sequence from clone CH211-254A7, complete sequence Length = 169723 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tattatttatttaaaaatta 24 |||||||||||||||||||| Sbjct: 30871 tattatttatttaaaaatta 30852
>emb|BX001007.6| Zebrafish DNA sequence from clone DKEY-97C13, complete sequence Length = 113198 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 24394 ttatattatttatttaaaaa 24375
>emb|AL837524.9| Zebrafish DNA sequence from clone DKEY-50P8, complete sequence Length = 202158 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 121023 ttatattatttatttaaaaa 121004
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatattatttatttaaaaat 22 |||||||||||||||||||| Sbjct: 325500 tatattatttatttaaaaat 325481
>gb|AC153995.2| Mus musculus 6 BAC RP24-534C23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151475 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ttatattatttatttaaaaa 21 |||||||||||||||||||| Sbjct: 36044 ttatattatttatttaaaaa 36025
>emb|AJ420561.1|HSA420561 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1521079 Length = 968 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ccctcgtgccgcctcgtgcc 300 |||||||||||||||||||| Sbjct: 20 ccctcgtgccgcctcgtgcc 1
>gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, complete sequence Length = 190284 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 68355 cgttcccggccttcgccgcc 68336
>emb|AJ342161.1|HSA342161 Homo sapiens genomic sequence surrounding NotI site, clone HSJ-CP20RS Length = 723 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 cgatcttcacgtccgggttg 204 |||||||||||||||||||| Sbjct: 244 cgatcttcacgtccgggttg 225
>dbj|AB012855.1| Oryza sativa mRNA for chitinase, complete cds Length = 1300 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 481 cgttcccggccttcgccgcc 500
>dbj|AB018248.1| Oryza sativa (indica cultivar-group) mRNA for chitinase, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 cgttcccggccttcgccgcc 282 |||||||||||||||||||| Sbjct: 455 cgttcccggccttcgccgcc 474 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,232,189 Number of Sequences: 3902068 Number of extensions: 4232189 Number of successful extensions: 115800 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115233 Number of HSP's gapped (non-prelim): 567 length of query: 301 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 279 effective length of database: 17,147,199,772 effective search space: 4784068736388 effective search space used: 4784068736388 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
