>TUBE_DROVI (Q08171) Protein Tube|
          Length = 514

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
 Frame = -1

Query: 239 GRFCGRATVSVALQAA------ALLCFVALSLVSAFRVFREFDGPAAHVD---CSEDSDS 87
           G+   R TV V LQ        +   FVAL  ++  +  R  DGPAAH+    CSED   
Sbjct: 122 GKLNERPTVGVLLQLLVHAEIYSAADFVALHFLNEPKPERPTDGPAAHISLDLCSEDLSE 181

Query: 86  KQAQEQGA 63
               E GA
Sbjct: 182 DMDVEDGA 189

>IPL1_CANAL (Q59S66) Spindle assembly checkpoint kinase (EC 2.7.11.1) (Aurora|
           kinase)
          Length = 530

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
 Frame = +1

Query: 145 TRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSA--AAE 318
           T    +  S++   S++  S++  V  P+N+P+  HT      R+ S ++Y SSA   A 
Sbjct: 101 TPTKNSSSSSSSSHSSSLLSSSPFVEEPENQPESNHTRATSHYRTTSTSQYKSSANKDAS 160

Query: 319 HDVTSRYAAAWSRRKISQS 375
           H + +      S ++ S+S
Sbjct: 161 HSLITSSKRKTSTKQTSES 179

>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
 Frame = +1

Query: 43  LSWIIYLA-----PXXXXXXXXXXXXXXT*AAGPSNSRKTRKAETRESATKQSSAAACSA 207
           L W +YL                     + ++ PS+S  T       S++  SS+++ S+
Sbjct: 111 LYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSS 170

Query: 208 TDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRYAAAWSRRKISQS 375
           + + +   +      +S   +S S S +  +SS+++   +TS  +++ S    S S
Sbjct: 171 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSS 226

>DNMT1_CHICK (Q92072) DNA (cytosine-5)-methyltransferase 1 (EC 2.1.1.37) (Dnmt1)|
           (DNA methyltransferase GgaI) (DNA MTase GgaI) (MCMT)
           (M.GgaI)
          Length = 1537

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/70 (21%), Positives = 38/70 (54%)
 Frame = +1

Query: 154 AETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTS 333
           + +  S++  SS+++ S++  +  P+ R      S  ++ +SP+ +R T S+  +  + S
Sbjct: 130 SSSSSSSSSSSSSSSSSSSSLLPAPRARKARRSRSNGESKKSPASSRVTRSSGRQPTILS 189

Query: 334 RYAAAWSRRK 363
            ++   ++RK
Sbjct: 190 VFSKGSTKRK 199

>CREA_BOTCI (O94130) DNA-binding protein creA (Carbon catabolite repressor)|
          Length = 435

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 15/67 (22%), Positives = 30/67 (44%)
 Frame = +1

Query: 160 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 339
           T  +  ++ S+   +       P+++P   H+S +  +  PSL  Y  + A  H+    Y
Sbjct: 219 TAATQVERESSTTATHYSQHTQPRHQPYYSHSSHNSRNHLPSLQAYAMTRAHSHEEDDHY 278

Query: 340 AAAWSRR 360
           A   ++R
Sbjct: 279 AHRHAKR 285

>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = +1

Query: 127 PSNSRKTRKAETRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSS 306
           PS+ RK  K         +SS AA S  ++   P         SP+  +++P+L+   ++
Sbjct: 424 PSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGL------VSPNSETQNPNLSPAAAA 477

Query: 307 AAAEHDVTSRYAAA 348
            +A H+V+S  + A
Sbjct: 478 VSAVHNVSSGASGA 491

>VGLX_EHV1B (P28968) Glycoprotein X precursor|
          Length = 797

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 160 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 339
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 340 AAAWS 354
           AA  S
Sbjct: 84  AATSS 88

>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +1

Query: 160 TRESATKQSSAAACSATDTVALPQNRPK*EHTSPHDTSRSPSLARYTSSAAAEHDVTSRY 339
           T    T  SS+ + S   T +   N      TSP  TS SP  + +TSS ++    +S  
Sbjct: 24  TTTETTTSSSSTSGSGQSTSSGTTNSSSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSST 83

Query: 340 AAAWS 354
           AA  S
Sbjct: 84  AATSS 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,059,258
Number of Sequences: 219361
Number of extensions: 694324
Number of successful extensions: 2770
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)