ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal30j18 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 342 bits (878), Expect = 5e-94 Identities = 173/181 (95%), Positives = 175/181 (96%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 501 FTTYELFPYDTFIFYTVLTS+ISLDRVSLK KVVDAPEILAVIGKVPHLSEFLNSLYNCQ Sbjct: 208 FTTYELFPYDTFIFYTVLTSVISLDRVSLKAKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 267 Query: 500 YKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 321 YKSFF AFSGL EQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV Sbjct: 268 YKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 327 Query: 320 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKLSRVI 141 DFID ELSRFIAAGKLHCKIDKVA VLETNRPD RNAFYQ+TIKQGDFLLNRIQKLSRVI Sbjct: 328 DFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAFYQATIKQGDFLLNRIQKLSRVI 387 Query: 140 D 138 D Sbjct: 388 D 388
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 319 bits (817), Expect = 6e-87 Identities = 157/181 (86%), Positives = 170/181 (93%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 501 FTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPEIL V+GK+P LSEFLNSLY CQ Sbjct: 206 FTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPEILTVLGKIPFLSEFLNSLYECQ 265 Query: 500 YKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 321 YK+FF AF+G+ QIK DRYL PHFR+YMREVRTVVYSQFLESYKSVT+EAMA AFGV+V Sbjct: 266 YKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQFLESYKSVTVEAMAKAFGVSV 325 Query: 320 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKLSRVI 141 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPD +NA YQ+TIKQGDFLLNRIQKLSRVI Sbjct: 326 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVI 385 Query: 140 D 138 D Sbjct: 386 D 386
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 221 bits (563), Expect = 2e-57 Identities = 103/181 (56%), Positives = 144/181 (79%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 501 FT+YEL Y TF+ YTV ++I+L R L+ KV+ EI V+ +P + +FL SLYNCQ Sbjct: 208 FTSYELMDYPTFVRYTVYVAMIALPRNELRDKVIKGSEIQEVLHGLPDVKQFLFSLYNCQ 267 Query: 500 YKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 321 Y++F+V +G+ +Q++LD + PH+RYY+RE+R + Y+Q LESY+S+T++ MA +FGVTV Sbjct: 268 YENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGYTQLLESYRSLTLQYMAESFGVTV 327 Query: 320 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKLSRVI 141 ++IDQEL+RFIAAG+LH K+D+V G++ETNRPD +N YQ+TIKQGD LLNRIQKLSRVI Sbjct: 328 EYIDQELARFIAAGRLHAKVDRVGGIVETNRPDNKNWQYQATIKQGDLLLNRIQKLSRVI 387 Query: 140 D 138 + Sbjct: 388 N 388
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 213 bits (543), Expect = 3e-55 Identities = 104/181 (57%), Positives = 137/181 (75%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 501 FT+YEL Y TF+ YTV S+I+L+R L++KV+ EIL V+ +P + ++L SLY C+ Sbjct: 208 FTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECR 267 Query: 500 YKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 321 Y FF + + + +++K D PH+RYY+RE+R YSQ LESY+S+T+ MA AFGV V Sbjct: 268 YSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGV 327 Query: 320 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKLSRVI 141 DFIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N YQ TIK+GD LLNR+QKLSRVI Sbjct: 328 DFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVI 387 Query: 140 D 138 + Sbjct: 388 N 388
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 212 bits (540), Expect = 7e-55 Identities = 103/181 (56%), Positives = 137/181 (75%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQ 501 FT+YEL Y TF+ YTV S+I+L+R L++KV+ EIL V+ +P + ++L SLY C+ Sbjct: 208 FTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECR 267 Query: 500 YKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTV 321 Y FF + + + +++K D PH+RYY+RE+R YSQ LESY+S+T+ MA AFGV V Sbjct: 268 YSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGV 327 Query: 320 DFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKLSRVI 141 +FIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N YQ TIK+GD LLNR+QKLSRVI Sbjct: 328 EFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVI 387 Query: 140 D 138 + Sbjct: 388 N 388
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 176 bits (447), Expect = 4e-44 Identities = 85/184 (46%), Positives = 130/184 (70%), Gaps = 4/184 (2%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEF---LNSLY 510 F++ EL PY + Y V++ ISLDRV +K K+VD+PE+LAV+ + +S +NSLY Sbjct: 219 FSSTELLPYYDVVRYAVISGAISLDRVDVKTKIVDSPEVLAVLPQNESMSSLEACINSLY 278 Query: 509 NCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAF 333 C Y FF + + + +K D++L H+RYY+RE+R Y+Q LESY+++++++MA++F Sbjct: 279 LCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYVREMRRRAYAQLLESYRALSIDSMAASF 338 Query: 332 GVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKL 153 GV+VD+ID++L+ FI KL+C ID+V GV+ TNRPDE+N YQ +KQGD LLN++QK Sbjct: 339 GVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFTNRPDEKNRQYQEVVKQGDVLLNKLQKY 398 Query: 152 SRVI 141 + Sbjct: 399 QATV 402
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 169 bits (429), Expect = 5e-42 Identities = 88/188 (46%), Positives = 118/188 (62%), Gaps = 7/188 (3%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVI------GKVPHLSEFLN 519 F +YEL Y+ I YTV+T+ +LDR L+ KV+ E+ + G + + E+L Sbjct: 222 FGSYELMTYENLILYTVITTTFALDRPDLRTKVIRCNEVQEQLTGGGLNGTLIPVREYLE 281 Query: 518 SLYNCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMA 342 S Y+C Y FF+ + L E+ K DRYL PHF YY R +R Y QFL YK+V ++ MA Sbjct: 282 SYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQFLTPYKTVRIDMMA 341 Query: 341 SAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRI 162 FGV+ FID+EL R IA G+L C+ID V GV+E N D +N Y++ IK GD LLNRI Sbjct: 342 KDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLYKAVIKDGDILLNRI 401 Query: 161 QKLSRVID 138 QKL+RVI+ Sbjct: 402 QKLARVIN 409
>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7| Length = 429 Score = 148 bits (373), Expect = 2e-35 Identities = 76/184 (41%), Positives = 117/184 (63%), Gaps = 4/184 (2%) Frame = -2 Query: 680 FTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHL---SEFLNSLY 510 FT+ EL Y++ Y +T + +L+R LK KV+D+PE+L++I L S SLY Sbjct: 238 FTSIELTSYESIATYASVTGLFTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLY 297 Query: 509 NCQYKSFFVAFSGLMEQIKLD-RYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAF 333 Y S+F + + +YL H +++RE+R VY+Q LESYK++++++MASAF Sbjct: 298 ASDYASYFPYLLETYANVLIPCKYLNRHADFFVREMRRKVYAQLLESYKTLSLKSMASAF 357 Query: 332 GVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQGDFLLNRIQKL 153 GV+V F+D +L +FI +L+C ID+V G++ETNRPD +NA Y +KQGD LL ++QK Sbjct: 358 GVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETNRPDNKNAQYHLLVKQGDGLLTKLQKY 417 Query: 152 SRVI 141 + Sbjct: 418 GAAV 421
>CSN1_ARATH (P45432) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) Length = 441 Score = 78.2 bits (191), Expect = 2e-14 Identities = 44/153 (28%), Positives = 73/153 (47%) Frame = -2 Query: 638 YTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQ 459 Y L ++ S DR LKQKV+D + VP + E +N Y+ +Y S + L Sbjct: 261 YGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSN 320 Query: 458 IKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAG 279 + LD +L H ++R Q+ + SV + MA AF +V +++EL I Sbjct: 321 LLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDN 380 Query: 278 KLHCKIDKVAGVLETNRPDERNAFYQSTIKQGD 180 ++ +ID +L D+RNA +Q ++ G+ Sbjct: 381 QIQARIDSHNKILYARHADQRNATFQKVLQMGN 413
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 76.3 bits (186), Expect = 8e-14 Identities = 40/162 (24%), Positives = 75/162 (46%) Frame = -2 Query: 668 ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSF 489 EL Y L ++ + DR L++ V+ + + P + + + Y +Y S Sbjct: 278 ELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASC 337 Query: 488 FVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFID 309 + + + LD YL PH R ++R Q+ Y S M MA+AF TV ++ Sbjct: 338 LKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATAFNTTVSALE 397 Query: 308 QELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 183 EL++ I G ++ +ID + +L D+R+ ++ +++ G Sbjct: 398 DELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMG 439
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 75.1 bits (183), Expect = 2e-13 Identities = 40/162 (24%), Positives = 74/162 (45%) Frame = -2 Query: 668 ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSF 489 EL Y L ++ + DR L++ V+ + + P + + + Y +Y S Sbjct: 262 ELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASC 321 Query: 488 FVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFID 309 + + + LD YL PH R ++R Q+ Y S M MA+AF TV ++ Sbjct: 322 LKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALE 381 Query: 308 QELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 183 EL++ I G ++ +ID + +L D+R+ ++ ++ G Sbjct: 382 DELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 74.7 bits (182), Expect = 2e-13 Identities = 40/162 (24%), Positives = 74/162 (45%) Frame = -2 Query: 668 ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSF 489 EL Y L ++ + DR L++ V+ + + P + + + Y +Y S Sbjct: 262 ELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASC 321 Query: 488 FVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFID 309 + + + LD YL PH R ++R Q+ Y S M MA+AF TV ++ Sbjct: 322 LKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALE 381 Query: 308 QELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 183 EL++ I G ++ +ID + +L D+R+ ++ ++ G Sbjct: 382 DELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 74.3 bits (181), Expect = 3e-13 Identities = 39/162 (24%), Positives = 73/162 (45%) Frame = -2 Query: 668 ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSF 489 EL Y L ++ + DR L++ V+ + + P + + + Y +Y S Sbjct: 262 ELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASC 321 Query: 488 FVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFID 309 + + + LD YL PH R ++R Q+ Y S M MA+AF TV ++ Sbjct: 322 LKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALE 381 Query: 308 QELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 183 EL++ I G + ++D + +L D+R+ ++ ++ G Sbjct: 382 DELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMG 423
>CSN1_DROME (Q9VVU5) COP9 signalosome complex subunit 1b (Signalosome subunit| 1b) (Dch1-2) Length = 525 Score = 68.6 bits (166), Expect = 2e-11 Identities = 37/162 (22%), Positives = 70/162 (43%) Frame = -2 Query: 668 ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSF 489 E+ Y L ++ + DR LK+ V+ + + P L + + Y +Y S Sbjct: 311 EMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASC 370 Query: 488 FVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFID 309 + + + +D Y+ PH ++R Q+ Y S M MA AF +V ++ Sbjct: 371 LTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLE 430 Query: 308 QELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 183 E+ + I G++ +ID +L D+RN+ ++ + G Sbjct: 431 NEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMG 472
>CSN2_DROME (Q94899) COP9 signalosome complex subunit 2 (Signalosome subunit 2)| (Dch2) (Alien protein) Length = 444 Score = 43.5 bits (101), Expect = 6e-04 Identities = 33/140 (23%), Positives = 62/140 (44%) Frame = -2 Query: 572 PEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVV 393 PEILA ++ +NS N F I D++++ H +R +RT V Sbjct: 307 PEILA-------MTNLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQV 359 Query: 392 YSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERN 213 + + YK++ + +A+A + ++ L I + +ID+V VL+ ++ + Sbjct: 360 LIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSA 419 Query: 212 AFYQSTIKQGDFLLNRIQKL 153 + Y + K N+IQ L Sbjct: 420 SRYNALEKWS----NQIQSL 435
>CSN1_SCHPO (O94308) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (SGN1) Length = 422 Score = 40.4 bits (93), Expect = 0.005 Identities = 31/129 (24%), Positives = 51/129 (39%) Frame = -2 Query: 638 YTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLMEQ 459 Y L ++ D L Q++ E A+ P L L + N +Y + Sbjct: 230 YISLCALACWDHKRLIQELERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQD 289 Query: 458 IKLDRYLQPHFRYYMREVRTVVYSQFLESYKSVTMEAMASAFGVTVDFIDQELSRFIAAG 279 LD YL P +R +L Y ++ +A F + +FI++ L I A Sbjct: 290 YSLDMYLAPQLTNLFSLIRERSLLDYLIPYSALPFSKIAVDFHIDENFIEKNLLEIIEAK 349 Query: 278 KLHCKIDKV 252 KL+ K+D + Sbjct: 350 KLNGKVDSL 358
>PSD12_MOUSE (Q9D8W5) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.4 bits (93), Expect = 0.005 Identities = 20/77 (25%), Positives = 40/77 (51%) Frame = -2 Query: 371 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 192 Y +TM+ MA ++VD + LS + + K+D++AGV+ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPNNLLNDWS 428 Query: 191 KQGDFLLNRIQKLSRVI 141 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>PSD12_PONPY (Q5RBI3) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.0 bits (92), Expect = 0.007 Identities = 19/77 (24%), Positives = 40/77 (51%) Frame = -2 Query: 371 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 192 Y +TM+ MA ++VD + LS + + K+D++AG++ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 428 Query: 191 KQGDFLLNRIQKLSRVI 141 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>PSD12_HUMAN (O00232) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 40.0 bits (92), Expect = 0.007 Identities = 19/77 (24%), Positives = 40/77 (51%) Frame = -2 Query: 371 YKSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTI 192 Y +TM+ MA ++VD + LS + + K+D++AG++ RP + N Sbjct: 369 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 428 Query: 191 KQGDFLLNRIQKLSRVI 141 ++ + L++ + K + +I Sbjct: 429 QKLNSLMSLVNKTTHLI 445
>MEGF9_HUMAN (Q9H1U4) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 33.1 bits (74), Expect = 0.80 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -1 Query: 447 PLSSTSFPLLHEGSAHCRLLTVFGVIQECDDGSYGF----CIWCDC 322 P + S P G C++ + + C DG YGF C+ C C Sbjct: 256 PHGALSIPCNSSGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQC 301
>DPO3_LISMO (Q8Y7G1) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2 Query: 545 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 372 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 371 YKSVTMEAMASAF 333 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>DPO3_LISMF (Q720A2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2 Query: 545 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 372 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 371 YKSVTMEAMASAF 333 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>DPO3_LISIN (Q92C34) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1444 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = -2 Query: 545 VPHLSEFLNSLYNCQYKSFFV--AFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLES 372 V H + F N Y+ + A + +++ ++L R+L PHF+ + T ++ LE Sbjct: 510 VAHNASFDMGFINTAYEKVGLEKAKNAVVDTLELARFLYPHFKNHRLNTLTKKFNIILEQ 569 Query: 371 YKSVTMEAMASAF 333 + +A A+A+ Sbjct: 570 HHRAVFDAEATAY 582
>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor| Length = 3718 Score = 31.2 bits (69), Expect = 3.1 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Frame = -1 Query: 411 GSAHCRLLTVFGVIQECDDGSYGF--CIWCDC 322 G HCR QEC G YGF CI C C Sbjct: 654 GLCHCRPGNTGATCQECSPGFYGFPSCIPCHC 685
>OR2M2_HUMAN (Q96R28) Olfactory receptor 2M2 (OST423)| Length = 347 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 644 IFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSLYNCQYKSFFVAFSGLM 465 +FYT+LT +++ SL+ K V + ++GK SE + LY + FF S Sbjct: 276 VFYTILTPMLNPLIYSLRNKEV-TRAFMKILGKGKSESELPHKLYVLLFAKFFFLISIFF 334 Query: 464 EQIKL 450 +K+ Sbjct: 335 YDVKI 339
>POTA_STAAW (Q7A169) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>POTA_STAAS (Q6GAB5) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>POTA_STAAR (Q6GHY6) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>POTA_STAAN (Q7A679) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>POTA_STAAM (Q99V03) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>POTA_STAAC (Q5HGY5) Spermidine/putrescine import ATP-binding protein potA (EC| 3.6.3.31) Length = 364 Score = 30.0 bits (66), Expect = 6.8 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 25/157 (15%) Frame = -2 Query: 680 FTTYELFP----YDTFIFYTVLTSIISLDRVSLKQKVVDAPEILAVIGKVPHLSEFLNSL 513 F Y LFP YD F L L + + QKV +A +++ + G + +N + Sbjct: 82 FQDYALFPHLNVYDNIAFGLKLKK---LSKTEIDQKVTEALKLVKLSG---YEKRNINEM 135 Query: 512 YNCQYKSFFVAFSGLMEQ---------IKLDRYLQPHFRYYMREVRTVVYSQF------- 381 Q + +A + + E LD L+ +Y +RE+++ + F Sbjct: 136 SGGQKQRVAIARAIVNEPEILLLDESLSALDLKLRTEMQYELRELQSRLGITFIFVTHDQ 195 Query: 380 -----LESYKSVTMEAMASAFGVTVDFIDQELSRFIA 285 L + V + FG D D+ ++RF+A Sbjct: 196 EEALALSDFLFVLKDGKIQQFGTPTDIYDEPVNRFVA 232
>ESTA_PSEPU (Q6B6R8) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 624 EYNLIGSCISKAKGGGCTRNPCSDRQSTTP 535 + NLIG+C S G GCT NP +TP Sbjct: 275 DQNLIGTCFS---GNGCTMNPTYGINGSTP 301
>ESTA_PSEAE (O33407) Esterase estA precursor (EC 3.1.1.1)| Length = 646 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 624 EYNLIGSCISKAKGGGCTRNPCSDRQSTTP 535 + NLIG+C S G GCT NP +TP Sbjct: 275 DQNLIGTCFS---GNGCTMNPTYGINGSTP 301 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,335,286 Number of Sequences: 219361 Number of extensions: 2078147 Number of successful extensions: 5671 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5512 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5665 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
