ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds 1065 0.0
2gb|BT009430.1| Triticum aestivum clone wlmk1.pk0035.d9:fis, full... 839 0.0
3ref|XM_478906.1| Oryza sativa (japonica cultivar-group), mRNA 129 1e-26
4gb|AY341850.1| Oryza sativa (japonica cultivar-group) WRKY9 mRNA... 129 1e-26
5tpg|BK005212.1| TPA: TPA_inf: Oryza sativa WRKY transcription fa... 129 1e-26
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
7dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
8dbj|AK070537.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
9gb|AY105754.1| Zea mays PCO084191 mRNA sequence 100 1e-17
10ref|XM_751992.1| Ustilago maydis 521 hypothetical protein (UM009... 42 2.0
11emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BA... 42 2.0
12ref|XR_003380.1| PREDICTED: Mus musculus similar to glyceraldehy... 40 8.0
13emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 i... 40 8.0
14dbj|AB242299.1| Asterias amurensis PKA-R mRNA for protein kinase... 40 8.0
15emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3... 40 8.0
16emb|CT009651.1| Medicago truncatula chromosome 5 clone mte1-70c1... 40 8.0
17emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chr... 40 8.0

>gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds
          Length = 2354

 Score = 1065 bits (537), Expect = 0.0
 Identities = 585/600 (97%), Gaps = 11/600 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    ataatctaattaattaatn-tattaggttcgctgtacaacgaatgtagggctgcaatgct 61
            ||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||
Sbjct: 2254 ataatctaattaattaatcatattaggttcgctgtacaacgaatgtagggctgcgatgct 2195

                                                                        
Query: 62   acatacagcaagggccttttccgcacttaaaaagacacatgcgtatttgctgcagt-ccc 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2194 acatacagcaagggccttttccgcacttaaaaagacacatgcgtatttgctgcagtgccc 2135

                                                                        
Query: 121  ccaggtatagcttatactagcatacttgcctccggctgaactgacttgtaaccgatacac 180
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 ccacgtatagcttatactagcatacttgcctccggctgaactgacttgtaaccgatacac 2075

                                                                        
Query: 181  aattgaga---------atcttgctgaagagattgtcattacaaagcattgttggtaata 231
            ||||||||         |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 aattgagacaattgagaatcttgctgaagagattgtcattacaaagcattgttggtaata 2015

                                                                        
Query: 232  tatgattcatggagctatgagcatttgcagacactctcattccctctcatggacccatga 291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 tatgattcatggagctatgagcatttgcagacactctcattccctctcatggacccatga 1955

                                                                        
Query: 292  ccaagttcccagcactgctatagcataggttagctgaatggtccatcggtgtggctctga 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 ccaagttcccagcactgctatagcataggttagctgaatggtccatcggtgtggctctga 1895

                                                                        
Query: 352  aagtaaacccttcgttacctttctcttctctcgaaccatacatgcggccagcagagtttc 411
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1894 aagtaaacccttcgttacctttctcttctctcgaaccatacatgcgggcagcagagtttc 1835

                                                                        
Query: 412  cttgtaccgctggcgctgccattgatgatggatgtctcatgttgccgtacatcgaaccca 471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 cttgtaccgctggcgctgccattgatgatggatgtctcatgttgccgtacatcgaaccca 1775

                                                                        
Query: 472  tggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggtttgtcgcgt 531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 tggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggtttgtcgcgt 1715

                                                                        
Query: 532  cgctgtggtttgggctgattccaacaccaagatcaagactgacagtgtcggtttcagccg 591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 cgctgtggtttgggctgattccaacaccaagatcaagactgacagtgtcggtttcagccg 1655



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>gb|BT009430.1| Triticum aestivum clone wlmk1.pk0035.d9:fis, full insert mRNA
            sequence
          Length = 2158

 Score =  839 bits (423), Expect = 0.0
 Identities = 552/591 (93%), Gaps = 7/591 (1%)
 Strand = Plus / Minus

                                                                        
Query: 3    ataatctaattaattaatn-tattaggttcgctgtacaacgaatgtagggctgcaatgct 61
            ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||  |||
Sbjct: 2138 ataatctaattaattaatcatattaggttcgctgtacaacgaatgtaggtctgcagcgct 2079

                                                                        
Query: 62   acatacagcaagggccttttccgcacttaaaaagacacatgcgtatttgctgcagtcccc 121
            |||||||||| ||||||||||||| | |||||||||||||||| |||||||||||||| |
Sbjct: 2078 acatacagcaggggccttttccgcgcctaaaaagacacatgcgcatttgctgcagtcctc 2019

                                                                        
Query: 122  caggtatagcttatactagcatacttgcctccggctgaactgacttgtaaccgatacaca 181
            |||||||||||||||   || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 2018 caggtatagcttata---gcttacttgcctctggctgaactgacttgtaaccgatacaca 1962

                                                                        
Query: 182  attgagaatcttgctgaagagattgtcattacaaa-gcattgttggtaatatatgattca 240
            ||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1961 attaagaatcttgctgaagagattgtcgttacaaaagcattgtttgtaatatatgattca 1902

                                                                        
Query: 241  tggagctatgagcatttgcagacactctcat--tccctctcatggacccatgaccaagtt 298
            ||||||||| ||||||||| |||||||||||  | |||||||||||||||||||||||||
Sbjct: 1901 tggagctataagcatttgctgacactctcatcattcctctcatggacccatgaccaagtt 1842

                                                                        
Query: 299  cccagcactgctatagcataggttagctgaatggtccatcggtgtggctctgaaagtaaa 358
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 cccagcaccgctatagcataggttagctgaatggtccatcggtgtggctctgaaagtaaa 1782

                                                                        
Query: 359  cccttcgttacctttctcttctctcgaaccatacatgcggccagcagagtttccttgtac 418
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1781 cccttcgttacctttctcttctctggaaccatacatgcggccagcagagtttccttgtac 1722

                                                                        
Query: 419  cgctggcgctgccattgatgatggatgtctcatgttgccgtacatcgaacccatggtttg 478
            || |||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 1721 cgttggcactgccattgatgatggatgtctcatgttgccgtacatcgaagccatggattg 1662

                                                                        
Query: 479  catttgatactgcatctggtcaggacctgaagactgcatttggtttgtcgcgtcgctgtg 538
            ||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct: 1661 catctggtactgcatctgatcaggacctgaagactgcatttggtttgtggcatcgctgtg 1602

                                                               
Query: 539  gtttgggctgattccaacaccaagatcaagactgacagtgtcggtttcagc 589
            ||| |||||||| ||||||||||| |||||||||||| |||||||||||||
Sbjct: 1601 gttcgggctgatcccaacaccaaggtcaagactgacattgtcggtttcagc 1551



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>ref|XM_478906.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2328

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                        
Query: 465  gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
            ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 1719 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 1660

                                                             
Query: 525  gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
            || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1659 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 1611



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtc 334
            |||||| ||||||||||| || || || ||  | || ||||||| |||||| ||||||||
Sbjct: 1906 ctctcacggacccatgactaaattgccggcggtactgtagcataagttagccgaatggtc 1847

                                                                     
Query: 335  catcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccata 391
            ||||||||||||| |||||||||| |||||  ||  ||| |||||||||||||||||
Sbjct: 1846 catcggtgtggctttgaaagtaaaaccttcactaggtttttcttctctcgaaccata 1790



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 58/68 (85%), Gaps = 4/68 (5%)
 Strand = Plus / Minus

                                                                        
Query: 189  atcttgctgaagagattgtcattacaaagcattgttggtaatatatgattcatggagcta 248
            ||||| ||||||||| ||||| ||| ||||||||   |||||||||||||| | ||||||
Sbjct: 1978 atctttctgaagagaatgtcaatacgaagcattg---gtaatatatgattc-tcgagcta 1923

                    
Query: 249  tgagcatt 256
            | ||||||
Sbjct: 1922 taagcatt 1915



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>gb|AY341850.1| Oryza sativa (japonica cultivar-group) WRKY9 mRNA, complete cds
          Length = 2068

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                        
Query: 465  gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
            ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 1747 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 1688

                                                             
Query: 525  gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
            || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1687 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 1639



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtc 334
            |||||| ||||||||||| || || || ||  | || ||||||| |||||| ||||||||
Sbjct: 1934 ctctcacggacccatgactaaattgccggcggtactgtagcataagttagccgaatggtc 1875

                                                                     
Query: 335  catcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccata 391
            ||||||||||||| |||||||||| |||||  ||  ||| |||||||||||||||||
Sbjct: 1874 catcggtgtggctttgaaagtaaaaccttcactaggtttttcttctctcgaaccata 1818



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>tpg|BK005212.1| TPA: TPA_inf: Oryza sativa WRKY transcription factor 78 (WRKY78)
            gene, complete cds
          Length = 5003

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                        
Query: 465  gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
            ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 4819 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 4760

                                                             
Query: 525  gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
            || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 4759 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 4711



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                        
Query: 312  tagcataggttagctgaatggtccatcggtgtggctctgaaagtaaacccttcgttacct 371
            ||||||| |||||| ||||||||||||||||||||| |||||||||| |||||  ||  |
Sbjct: 4969 tagcataagttagccgaatggtccatcggtgtggctttgaaagtaaaaccttcactaggt 4910

                                
Query: 372  ttctcttctctcgaaccata 391
            || |||||||||||||||||
Sbjct: 4909 ttttcttctctcgaaccata 4890



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Plus

                                                                            
Query: 465      gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
                ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 23601167 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 23601226

                                                                 
Query: 525      gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
                || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 23601227 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 23601275



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                            
Query: 275      ctctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtc 334
                |||||| ||||||||||| || || || ||  | || ||||||| |||||| ||||||||
Sbjct: 23600980 ctctcacggacccatgactaaattgccggcggtactgtagcataagttagccgaatggtc 23601039

                                                                         
Query: 335      catcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccata 391
                ||||||||||||| |||||||||| |||||  ||  ||| |||||||||||||||||
Sbjct: 23601040 catcggtgtggctttgaaagtaaaaccttcactaggtttttcttctctcgaaccata 23601096



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 58/68 (85%), Gaps = 4/68 (5%)
 Strand = Plus / Plus

                                                                            
Query: 189      atcttgctgaagagattgtcattacaaagcattgttggtaatatatgattcatggagcta 248
                ||||| ||||||||| ||||| ||| ||||||||   |||||||||||||| | ||||||
Sbjct: 23600908 atctttctgaagagaatgtcaatacgaagcattg---gtaatatatgattc-tcgagcta 23600963

                        
Query: 249      tgagcatt 256
                | ||||||
Sbjct: 23600964 taagcatt 23600971



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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1127_E01
          Length = 123787

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Plus

                                                                         
Query: 465   gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
             ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 53608 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 53667

                                                              
Query: 525   gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
             || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 53668 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 53716



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Plus

                                                                         
Query: 275   ctctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtc 334
             |||||| ||||||||||| || || || ||  | || ||||||| |||||| ||||||||
Sbjct: 53421 ctctcacggacccatgactaaattgccggcggtactgtagcataagttagccgaatggtc 53480

                                                                      
Query: 335   catcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccata 391
             ||||||||||||| |||||||||| |||||  ||  ||| |||||||||||||||||
Sbjct: 53481 catcggtgtggctttgaaagtaaaaccttcactaggtttttcttctctcgaaccata 53537



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 58/68 (85%), Gaps = 4/68 (5%)
 Strand = Plus / Plus

                                                                         
Query: 189   atcttgctgaagagattgtcattacaaagcattgttggtaatatatgattcatggagcta 248
             ||||| ||||||||| ||||| ||| ||||||||   |||||||||||||| | ||||||
Sbjct: 53349 atctttctgaagagaatgtcaatacgaagcattg---gtaatatatgattc-tcgagcta 53404

                     
Query: 249   tgagcatt 256
             | ||||||
Sbjct: 53405 taagcatt 53412



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>dbj|AK070537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062H03, full
            insert sequence
          Length = 2328

 Score =  129 bits (65), Expect = 1e-26
 Identities = 98/109 (89%)
 Strand = Plus / Minus

                                                                        
Query: 465  gaacccatggtttgcatttgatactgcatctggtcaggacctgaagactgcatttggttt 524
            ||||||||||  |||||||||||||||||||| |||| | |||| ||||||| |||||||
Sbjct: 1719 gaacccatgggctgcatttgatactgcatctgatcagaaactgaggactgcaattggttt 1660

                                                             
Query: 525  gtcgcgtcgctgtggtttgggctgattccaacaccaagatcaagactga 573
            || || ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 1659 gtggcatcgctgtggttcgggctgattccaacaccaagatcaaggctga 1611



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtc 334
            |||||| ||||||||||| || || || ||  | || ||||||| |||||| ||||||||
Sbjct: 1906 ctctcacggacccatgactaaattgccggcggtactgtagcataagttagccgaatggtc 1847

                                                                     
Query: 335  catcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccata 391
            ||||||||||||| |||||||||| |||||  ||  ||| |||||||||||||||||
Sbjct: 1846 catcggtgtggctttgaaagtaaaaccttcactaggtttttcttctctcgaaccata 1790



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 58/68 (85%), Gaps = 4/68 (5%)
 Strand = Plus / Minus

                                                                        
Query: 189  atcttgctgaagagattgtcattacaaagcattgttggtaatatatgattcatggagcta 248
            ||||| ||||||||| ||||| ||| ||||||||   |||||||||||||| | ||||||
Sbjct: 1978 atctttctgaagagaatgtcaatacgaagcattg---gtaatatatgattc-tcgagcta 1923

                    
Query: 249  tgagcatt 256
            | ||||||
Sbjct: 1922 taagcatt 1915



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>gb|AY105754.1| Zea mays PCO084191 mRNA sequence
          Length = 1179

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 107/126 (84%)
 Strand = Plus / Minus

                                                                       
Query: 277 ctcatggacccatgaccaagttcccagcactgctatagcataggttagctgaatggtcca 336
           ||||||||||||| || ||||| |||||||| || || |||| |||||||||  ||||||
Sbjct: 780 ctcatggacccatcactaagttaccagcactactgtaacataagttagctgatcggtcca 721

                                                                       
Query: 337 tcggtgtggctctgaaagtaaacccttcgttacctttctcttctctcgaaccatacatgc 396
             ||||  ||| ||||||||||||||||||| ||||| |||||||| ||||| |||||||
Sbjct: 720 aaggtgcagctttgaaagtaaacccttcgtttcctttttcttctctggaaccgtacatgc 661

                 
Query: 397 ggccag 402
            |||||
Sbjct: 660 tgccag 655



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 478 gcatttgatactgcatctggtcaggacctgaagactgcatttggtttgtcgcgtcgctgt 537
           |||| |||||||||||  | || ||| |||| | |||||| |||||||| || |||||||
Sbjct: 594 gcatctgatactgcataggttctggaactgagggctgcatctggtttgttgcatcgctgt 535

                                               
Query: 538 ggtttgggctgattccaacaccaagatcaagactga 573
           |||| |||||||| || |||||||| ||||||||||
Sbjct: 534 ggttagggctgatacctacaccaaggtcaagactga 499



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>ref|XM_751992.1| Ustilago maydis 521 hypothetical protein (UM00938.1) partial mRNA
          Length = 1416

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 551 tccaacaccaagatcaagactgaca 575
           ||||||| |||||||||||||||||
Sbjct: 532 tccaacaacaagatcaagactgaca 556



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>emb|AL669986.1|NCB7N14 Neurospora crassa DNA linkage group II BAC clone B7N14
          Length = 107947

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 424   gcgctgccattgatgatggat 444
             |||||||||||||||||||||
Sbjct: 64829 gcgctgccattgatgatggat 64849



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>ref|XR_003380.1| PREDICTED: Mus musculus similar to glyceraldehyde-3-phosphate
           dehydrogenase (LOC383692), mRNA
          Length = 1023

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 attgtcattacaaagcattg 222
           ||||||||||||||||||||
Sbjct: 874 attgtcattacaaagcattg 855



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>emb|BX296553.6| Zebrafish DNA sequence from clone CH211-222G19 in linkage group 8,
             complete sequence
          Length = 108215

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   aagactgcatttggtttgtc 527
             ||||||||||||||||||||
Sbjct: 40903 aagactgcatttggtttgtc 40922



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>dbj|AB242299.1| Asterias amurensis PKA-R mRNA for protein kinase A regulatory
            subunit, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tgctacatacagcaagggcc 77
            ||||||||||||||||||||
Sbjct: 1040 tgctacatacagcaagggcc 1059



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>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE
          Length = 211224

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    ttcgttacctttctcttctc 381
              ||||||||||||||||||||
Sbjct: 187732 ttcgttacctttctcttctc 187751



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>emb|CT009651.1| Medicago truncatula chromosome 5 clone mte1-70c15, COMPLETE SEQUENCE
          Length = 110880

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    ttcgttacctttctcttctc 381
              ||||||||||||||||||||
Sbjct: 107830 ttcgttacctttctcttctc 107811



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>emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete
             sequence
          Length = 222471

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   attgtcattacaaagcattg 222
             ||||||||||||||||||||
Sbjct: 86209 attgtcattacaaagcattg 86228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,991,378
Number of Sequences: 3902068
Number of extensions: 4991378
Number of successful extensions: 97301
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97221
Number of HSP's gapped (non-prelim): 69
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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