ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30i10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105847.1| Zea mays PCO081230 mRNA sequence 103 8e-19
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
3dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
4dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
5dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mR... 101 3e-18
6dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
7dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
8gb|AE013039.1| Thermoanaerobacter tengcongensis MB4, section 66 ... 48 0.039
9gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Can... 48 0.039
10gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 46 0.15
11ref|XM_464548.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.60
12gb|DQ022189.1| Paecilomyces farinosus sublitisin-like protease (... 44 0.60
13emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid co... 44 0.60
14ref|XM_684302.1| PREDICTED: Danio rerio similar to FAT tumor sup... 44 0.60
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
16dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
17ref|NM_204754.1| Gallus gallus taxilin beta (TXLNB), mRNA 42 2.4
18gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete... 42 2.4
19emb|BX936451.13| Zebrafish DNA sequence from clone CH211-201F1 i... 42 2.4
20gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosom... 42 2.4
21ref|XM_777937.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 2.4
22emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 2.4
23emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364 42 2.4
24emb|CR735102.8| Zebrafish DNA sequence from clone DKEYP-8H9 in l... 42 2.4
25gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Ca... 42 2.4
26ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical... 42 2.4
27gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7... 42 2.4
28gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-... 42 2.4
29dbj|D89999.1| Gallus gallus MDP77 mRNA for muscle derived protei... 42 2.4
30ref|NM_124767.2| Arabidopsis thaliana unknown protein AT5G53880 ... 40 9.4
31ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 9.4
32ref|XM_482186.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.4
33gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, com... 40 9.4
34gb|AC120863.9| Mus musculus chromosome 7, clone RP23-84H3, compl... 40 9.4
35gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosom... 40 9.4
36ref|XM_653936.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.4
37gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat rece... 40 9.4
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.4
39gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome... 40 9.4
40gb|AC139863.5| Mus musculus chromosome 14, clone RP23-19M21, com... 40 9.4
41emb|CT009620.9| Zebrafish DNA sequence from clone CH73-187F10 in... 40 9.4
42gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome... 40 9.4
43gb|AC134791.8| Mus musculus chromosome 14, clone RP23-377F8, com... 40 9.4
44emb|CR855377.7| Zebrafish DNA sequence from clone DKEY-263F15 in... 40 9.4
45gb|AC145436.2| Homo sapiens chromosome 15, clone XXfos-86698B3, ... 40 9.4
46emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chr... 40 9.4
47gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 9.4
48emb|AL080312.14|HSJ1025A1 Human DNA sequence from clone RP5-1025... 40 9.4
49emb|AL035667.12|HS805C22 Human DNA sequence from clone RP4-805C2... 40 9.4
50gb|BT000221.1| Arabidopsis thaliana unknown protein (At5g53880) ... 40 9.4
51gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 9.4
52gb|AC161451.4| Mus musculus BAC clone RP23-405D12 from chromosom... 40 9.4
53emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in... 40 9.4
54gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
55gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete ... 40 9.4
56gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, com... 40 9.4
57dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.4
58gb|AY072405.1| Arabidopsis thaliana unknown protein (At5g53880) ... 40 9.4
59gb|CP000249.1| Frankia sp. CcI3, complete genome 40 9.4
60gb|AC158533.2| Mus musculus BAC clone RP23-107I15 from chromosom... 40 9.4
61gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157... 40 9.4
62emb|BX323880.7| Zebrafish DNA sequence from clone CH211-139K8 in... 40 9.4
63dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
65dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
66gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 40 9.4
67gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinosta... 40 9.4
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.4
69gb|AC013719.8| Homo sapiens BAC clone RP11-270E5 from 2, complet... 40 9.4
70gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2,... 40 9.4
71gb|AC063945.16| Homo sapiens 12 BAC RP11-417A9 (Roswell Park Can... 40 9.4
72gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Roswell Park Can... 40 9.4
73gb|AY087057.1| Arabidopsis thaliana clone 31129 mRNA, complete s... 40 9.4
74gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosom... 40 9.4
75dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
76gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, comp... 40 9.4
77dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
78dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
79dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
80dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mR... 40 9.4
81dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.4
82dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
83dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
84dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
85dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
86dbj|AK113349.1| Ciona intestinalis cDNA, clone:ciad040n20, full ... 40 9.4
87emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.4
88gb|AF031882.1|AF031882 Euprymna morsei internal transcribed spac... 40 9.4
89gb|AF031881.1|AF031881 Euprymna scolopes internal transcribed sp... 40 9.4
90gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosom... 40 9.4
91emb|AL611930.24| Mouse DNA sequence from clone RP23-58H5 on chro... 40 9.4 
>gb|AY105847.1| Zea mays PCO081230 mRNA sequence
          Length = 1699

 Score =  103 bits (52), Expect = 8e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                        
Query: 601  tttcttcttggttttcttctcctctttcttgagcttcttctcggcttccttttgtgctcg 660
            ||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||| ||
Sbjct: 1063 tttcttcttggctttcttctcctctttcttcagcttcttctcagcttccttctgtgcccg 1004

                                        
Query: 661  ggctgcagccttcgctgcttgcttctca 688
            ||| || || || |||||||||||||||
Sbjct: 1003 ggccgcggcttttgctgcttgcttctca 976



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 289  tcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccgcgagcagggc 348
            |||||||||||   |||| ||| |||||||||||||||| |||||| ||||||| |||||
Sbjct: 1370 tcagttgctggcattcgctgggaggtagtactggtagtatcccagcaccgcgaggagggc 1311

                        
Query: 349  gacgagcacggc 360
             || ||||||||
Sbjct: 1310 aaccagcacggc 1299



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 389  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctt 435
            |||||||||| ||| ||||| || |||||||||||||||||||||||
Sbjct: 1276 gcccatgaccagtaggactgcgccttcttcctcttcaggatcgcctt 1230



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 219  tctcacctgcaaaattggtct 239
            |||||||||||||||||||||
Sbjct: 1440 tctcacctgcaaaattggtct 1420
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                            
Query: 389      gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
                ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 10790685 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 10790626

                           
Query: 449      ttggtcttggt 459
                ||| |||||||
Sbjct: 10790625 ttgctcttggt 10790615



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 279      tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
                ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 10790789 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 10790730

                                      
Query: 339      cgagcagggcgacgagcacggc 360
                | ||||||||||||||| ||||
Sbjct: 10790729 caagcagggcgacgagcgcggc 10790708



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 628      cttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctgcttgcttctc 687
                |||||| |||||||| || ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 10790328 cttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctgcttgcttctc 10790269



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                                
Query: 198      gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
                |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 10790860 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 10790815
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 389   gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
             ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 14408 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 14349

                        
Query: 449   ttggtcttggt 459
             ||| |||||||
Sbjct: 14348 ttgctcttggt 14338



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 279   tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
             ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 14512 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 14453

                                   
Query: 339   cgagcagggcgacgagcacggc 360
             | ||||||||||||||| ||||
Sbjct: 14452 caagcagggcgacgagcgcggc 14431



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                         
Query: 628   cttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctgcttgcttctc 687
             |||||| |||||||| || ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 14051 cttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctgcttgcttctc 13992



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                             
Query: 198   gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
             |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 14583 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 14538
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                          
Query: 389    gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
              ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 127303 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 127244

                         
Query: 449    ttggtcttggt 459
              ||| |||||||
Sbjct: 127243 ttgctcttggt 127233



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 279    tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
              ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 127407 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 127348

                                    
Query: 339    cgagcagggcgacgagcacggc 360
              | ||||||||||||||| ||||
Sbjct: 127347 caagcagggcgacgagcgcggc 127326



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                          
Query: 628    cttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctgcttgcttctc 687
              |||||| |||||||| || ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 126946 cttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctgcttgcttctc 126887



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                              
Query: 198    gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
              |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 127478 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 127433
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>dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mRNA for BRI1-KD
            interacting protein 103, complete cds
          Length = 2366

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 389  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1885 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1826

                       
Query: 449  ttggtcttggt 459
            ||| |||||||
Sbjct: 1825 ttgctcttggt 1815



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 618  tctcctctttcttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctg 677
            |||||||| ||||||| |||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 1647 tctcctctctcttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctg 1588

                      
Query: 678  cttgcttctc 687
            ||||||||||
Sbjct: 1587 cttgcttctc 1578



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 279  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1989 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1930

                                  
Query: 339  cgagcagggcgacgagcacggc 360
            | ||||||||||||||| ||||
Sbjct: 1929 caagcagggcgacgagcgcggc 1908



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 198  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2060 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2015
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>dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101D09, full
            insert sequence
          Length = 2295

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 389  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1887 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1828

                       
Query: 449  ttggtcttggt 459
            ||| |||||||
Sbjct: 1827 ttgctcttggt 1817



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 618  tctcctctttcttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctg 677
            |||||||| ||||||| |||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 1649 tctcctctctcttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctg 1590

                      
Query: 678  cttgcttctc 687
            ||||||||||
Sbjct: 1589 cttgcttctc 1580



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 279  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1991 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1932

                                  
Query: 339  cgagcagggcgacgagcacggc 360
            | ||||||||||||||| ||||
Sbjct: 1931 caagcagggcgacgagcgcggc 1910



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 198  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2062 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2017
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>dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H05, full
           insert sequence
          Length = 1352

 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 389 gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 448
           ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 963 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 904

                      
Query: 449 ttggtcttggt 459
           ||| |||||||
Sbjct: 903 ttgctcttggt 893



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 618 tctcctctttcttgagcttcttctcggcttccttttgtgctcgggctgcagccttcgctg 677
           |||||||| ||||||| |||||||| || ||||||||||| |||||||| ||||||||||
Sbjct: 725 tctcctctctcttgagtttcttctctgcctccttttgtgcacgggctgctgccttcgctg 666

                     
Query: 678 cttgcttctc 687
           ||||||||||
Sbjct: 665 cttgcttctc 656



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 279  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 338
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1067 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1008

                                  
Query: 339  cgagcagggcgacgagcacggc 360
            | ||||||||||||||| ||||
Sbjct: 1007 caagcagggcgacgagcgcggc 986



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 198  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 245
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 1138 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 1093
to top
>gb|AE013039.1| Thermoanaerobacter tengcongensis MB4, section 66 of 244 of the
            complete genome
          Length = 10989

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 614  ttcttctcctctttcttgagcttcttct 641
            ||||||||||||||| ||||||||||||
Sbjct: 2788 ttcttctcctctttcctgagcttcttct 2761
to top
>gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146502

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 612    ttttcttctcctctttcttgagcttctt 639
              ||||||| ||||||||||||||||||||
Sbjct: 122598 ttttcttttcctctttcttgagcttctt 122625
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 439     cagcggggccttggtcttggtga 461
               |||||||||||||||||||||||
Sbjct: 2663170 cagcggggccttggtcttggtga 2663148
to top
>ref|XM_464548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 346 ggcgacgagcacggccacggcg 367
           ||||||||||||||||||||||
Sbjct: 339 ggcgacgagcacggccacggcg 318
to top
>gb|DQ022189.1| Paecilomyces farinosus sublitisin-like protease (PR1H) mRNA,
           complete cds
          Length = 2060

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 600 ttttcttcttggttttcttctcctct 625
           |||||||||||||||||| |||||||
Sbjct: 119 ttttcttcttggttttctgctcctct 144
to top
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8
          Length = 197698

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 612    ttttcttctcctctttcttgagcttcttct 641
              |||| |||||||| ||||||||||||||||
Sbjct: 190576 tttttttctcctccttcttgagcttcttct 190547
to top
>ref|XM_684302.1| PREDICTED: Danio rerio similar to FAT tumor suppressor homolog 4
            (LOC560902), mRNA
          Length = 6982

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 602  ttcttcttggttttcttctcctcttt 627
            |||| |||||||||||||||||||||
Sbjct: 5219 ttctccttggttttcttctcctcttt 5194
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 346     ggcgacgagcacggccacggcg 367
               ||||||||||||||||||||||
Sbjct: 5819104 ggcgacgagcacggccacggcg 5819125



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 598      agttttcttcttggttttcttctc 621
                ||||||||||||| ||||||||||
Sbjct: 21400635 agttttcttcttgtttttcttctc 21400658



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 162     agcttctccagtcttttcag 181
               ||||||||||||||||||||
Sbjct: 2940472 agcttctccagtcttttcag 2940491
to top
>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544H11
          Length = 178376

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 346   ggcgacgagcacggccacggcg 367
             ||||||||||||||||||||||
Sbjct: 48906 ggcgacgagcacggccacggcg 48927
to top
>ref|NM_204754.1| Gallus gallus taxilin beta (TXLNB), mRNA
          Length = 4704

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 612  ttttcttctcctctttcttga 632
            |||||||||||||||||||||
Sbjct: 4599 ttttcttctcctctttcttga 4619
to top
>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence
          Length = 180378

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 615    tcttctcctctttcttgagcttctt 639
              |||||||||| ||||||||||||||
Sbjct: 159545 tcttctcctccttcttgagcttctt 159521
to top
>emb|BX936451.13| Zebrafish DNA sequence from clone CH211-201F1 in linkage group 21,
             complete sequence
          Length = 169828

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   agttttcttcttggttttctt 618
             |||||||||||||||||||||
Sbjct: 71847 agttttcttcttggttttctt 71867
to top
>gb|AC124463.2| Mus musculus BAC clone RP24-152K14 from chromosome 1, complete sequence
          Length = 153199

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 599   gttttcttcttggttttcttctcct 623
             ||||||||| |||||||||||||||
Sbjct: 34289 gttttcttcatggttttcttctcct 34265
to top
>ref|XM_777937.1| PREDICTED: Strongylocentrotus purpuratus similar to heat shock
           protein 90-alpha (LOC577725), mRNA
          Length = 1639

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 602 ttcttcttggttttcttctcctctttctt 630
           ||||||||| | |||||||||||||||||
Sbjct: 933 ttcttcttgatcttcttctcctctttctt 905
to top
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 332   agcgccgcgagcagggcgacg 352
             |||||||||||||||||||||
Sbjct: 14231 agcgccgcgagcagggcgacg 14211
to top
>emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364
          Length = 14999

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   gctttcttcctcttcaggatc 430
             |||||||||||||||||||||
Sbjct: 13769 gctttcttcctcttcaggatc 13749
to top
>emb|CR735102.8| Zebrafish DNA sequence from clone DKEYP-8H9 in linkage group 21,
             complete sequence
          Length = 118807

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 598   agttttcttcttggttttctt 618
             |||||||||||||||||||||
Sbjct: 28837 agttttcttcttggttttctt 28857
to top
>gb|AC087863.10| Homo sapiens 12q BAC RP11-357K6 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 179876

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 601   tttcttcttggttttcttctcctct 625
             |||||||||| ||||||||||||||
Sbjct: 97595 tttcttcttgattttcttctcctct 97619
to top
>ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC364.01),
           partial mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 410 gctttcttcctcttcaggatc 430
           |||||||||||||||||||||
Sbjct: 336 gctttcttcctcttcaggatc 356
to top
>gb|AC008266.3|AC008266 Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p21, complete sequence
          Length = 177675

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1      gcatgtttacatgcatacttatttatatg 29
              |||||||||  ||||||||||||||||||
Sbjct: 150533 gcatgtttatttgcatacttatttatatg 150505
to top
>gb|AC006960.1|AC006960 Homo sapiens clone RP11-182J23 from 7p14-15, complete sequence
          Length = 179757

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 1     gcatgtttacatgcatacttatttatatg 29
             |||||||||  ||||||||||||||||||
Sbjct: 88502 gcatgtttatttgcatacttatttatatg 88474
to top
>dbj|D89999.1| Gallus gallus MDP77 mRNA for muscle derived protein, complete cds
          Length = 4704

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 612  ttttcttctcctctttcttga 632
            |||||||||||||||||||||
Sbjct: 4599 ttttcttctcctctttcttga 4619
to top
>ref|NM_124767.2| Arabidopsis thaliana unknown protein AT5G53880 mRNA, complete cds
          Length = 510

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 613 tttcttctcctctttcttga 632
           ||||||||||||||||||||
Sbjct: 258 tttcttctcctctttcttga 239
to top
>ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group), P0671F11.9 mRNA
          Length = 2293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 412  tttcttcctcttcaggatcgcctt 435
            ||||||||||||||||| ||||||
Sbjct: 1858 tttcttcctcttcaggaccgcctt 1835
to top
>ref|XM_482186.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 412  tttcttcctcttcaggatcgcctt 435
            ||||||||||||||||| ||||||
Sbjct: 1893 tttcttcctcttcaggaccgcctt 1870
to top
>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 592   tggctcagttttcttcttggtttt 615
             |||| |||||||||||||||||||
Sbjct: 89841 tggcccagttttcttcttggtttt 89818
to top
>gb|AC120863.9| Mus musculus chromosome 7, clone RP23-84H3, complete sequence
          Length = 241742

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 596    tcagttttcttcttggtttt 615
              ||||||||||||||||||||
Sbjct: 122856 tcagttttcttcttggtttt 122837
to top
>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete sequence
          Length = 157958

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 619    ctcctctttcttgagcttct 638
              ||||||||||||||||||||
Sbjct: 150776 ctcctctttcttgagcttct 150757
to top
>ref|XM_653936.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1424.2), mRNA
          Length = 2163

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 629  ttgagcttcttctcggcttc 648
            ||||||||||||||||||||
Sbjct: 1580 ttgagcttcttctcggcttc 1561
to top
>gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat receptor-like kinases and
             ternary complex factor MIP1-like genes, complete cds;
             retrotransposon putative membrane-associated protein and
             gag-pol precursor, pseudogenes, complete sequence; and
             unknown genes
          Length = 102522

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   agcttctccagtcttttcag 181
             ||||||||||||||||||||
Sbjct: 44105 agcttctccagtcttttcag 44086
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      caaaattggtctagtaagattcat 251
                |||||||| |||||||||||||||
Sbjct: 12464532 caaaattgctctagtaagattcat 12464555
to top
>gb|AC161603.4| Mus musculus BAC clone RP23-304M9 from chromosome 15, complete sequence
          Length = 199419

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      tttacatgcatacttattta 25
              ||||||||||||||||||||
Sbjct: 166334 tttacatgcatacttattta 166353
to top
>gb|AC139863.5| Mus musculus chromosome 14, clone RP23-19M21, complete sequence
          Length = 194221

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 612   ttttcttctcctctttcttg 631
             ||||||||||||||||||||
Sbjct: 89292 ttttcttctcctctttcttg 89311
to top
>emb|CT009620.9| Zebrafish DNA sequence from clone CH73-187F10 in linkage group 6,
             complete sequence
          Length = 95528

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 599   gttttcttcttggttttctt 618
             ||||||||||||||||||||
Sbjct: 56069 gttttcttcttggttttctt 56050
to top
>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete sequence
          Length = 197213

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 619    ctcctctttcttgagcttct 638
              ||||||||||||||||||||
Sbjct: 155039 ctcctctttcttgagcttct 155058
to top
>gb|AC134791.8| Mus musculus chromosome 14, clone RP23-377F8, complete sequence
          Length = 210013

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 612  ttttcttctcctctttcttg 631
            ||||||||||||||||||||
Sbjct: 1774 ttttcttctcctctttcttg 1793
to top
>emb|CR855377.7| Zebrafish DNA sequence from clone DKEY-263F15 in linkage group 8,
             complete sequence
          Length = 107728

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 600   ttttcttcttggttttcttctcct 623
             ||||||||||| ||||||||||||
Sbjct: 13893 ttttcttcttgattttcttctcct 13870
to top
>gb|AC145436.2| Homo sapiens chromosome 15, clone XXfos-86698B3, complete sequence
          Length = 31957

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 599  gttttcttcttggttttctt 618
            ||||||||||||||||||||
Sbjct: 7749 gttttcttcttggttttctt 7730
to top
>emb|AL358453.8| Human DNA sequence from clone RP11-115M14 on chromosome 1 Contains a
             cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1)
             pseudogene, complete sequence
          Length = 108934

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   tggttttcttctcctctttc 628
             ||||||||||||||||||||
Sbjct: 66083 tggttttcttctcctctttc 66064
to top
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
              from chromosome 3, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 228    caaaattggtctagtaagattcat 251
              |||||||| |||||||||||||||
Sbjct: 123409 caaaattgctctagtaagattcat 123386
to top
>emb|AL080312.14|HSJ1025A1 Human DNA sequence from clone RP5-1025A1 on chromosome 20p11.21-11.23
             Contains the 5' part of the ACAS2L gene for
             acetyl-Coenzyme A synthetase (AMP forming)-like, the VSX1
             gene for visual system homeobox 1 (zebrafish) homolog
             (CHX10-like), variants L1 and S1 and four CpG islands,
             complete sequence
          Length = 94664

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gttgctctcacctgcaaaat 233
             ||||||||||||||||||||
Sbjct: 56474 gttgctctcacctgcaaaat 56455
to top
>emb|AL035667.12|HS805C22 Human DNA sequence from clone RP4-805C22 on chromosome 20q13.2-13.32
             Contains the 3' end of the gene for downstream of tyrosine
             kinase 5 (DOK5) protein, complete sequence
          Length = 135391

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 482   ttctgcttctgttctttgttcaat 505
             ||||||||||||||||| ||||||
Sbjct: 13607 ttctgcttctgttcttttttcaat 13630
to top
>gb|BT000221.1| Arabidopsis thaliana unknown protein (At5g53880) mRNA, complete cds
          Length = 318

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 613 tttcttctcctctttcttga 632
           ||||||||||||||||||||
Sbjct: 150 tttcttctcctctttcttga 131
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     ctggtagtagcccagcgccg 338
               ||||||||||||||||||||
Sbjct: 2771610 ctggtagtagcccagcgccg 2771591
to top
>gb|AC161451.4| Mus musculus BAC clone RP23-405D12 from chromosome 15, complete
             sequence
          Length = 190621

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tttacatgcatacttattta 25
             ||||||||||||||||||||
Sbjct: 10518 tttacatgcatacttattta 10537
to top
>emb|CR391977.5| Zebrafish DNA sequence from clone DKEYP-73B11 in linkage group 25,
              complete sequence
          Length = 189510

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 406    ctgggctttcttcctcttcaggat 429
              ||||||||||||||| ||||||||
Sbjct: 164613 ctgggctttcttccttttcaggat 164636
to top
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14,
              complete sequence
          Length = 132560

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 228    caaaattggtctagtaagattcat 251
              |||||||| |||||||||||||||
Sbjct: 122214 caaaattgctctagtaagattcat 122237
to top
>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence
          Length = 124152

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 614   ttcttctcctctttcttgagcttc 637
             ||||||| ||||||||||||||||
Sbjct: 19330 ttcttcttctctttcttgagcttc 19353
to top
>gb|AC020642.7| Homo sapiens chromosome 10 clone RP11-275D14, complete sequence
          Length = 145697

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tttacatgcatacttattta 25
             ||||||||||||||||||||
Sbjct: 92824 tttacatgcatacttattta 92843
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 614     ttcttctcctctttcttgagcttc 637
               ||||||| ||||||||||||||||
Sbjct: 4464047 ttcttcttctctttcttgagcttc 4464024



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    gttgctggtgctcgccgggc 311
              ||||||||||||||||||||
Sbjct: 251688 gttgctggtgctcgccgggc 251669
to top
>gb|AY072405.1| Arabidopsis thaliana unknown protein (At5g53880) mRNA, complete cds
          Length = 501

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 613 tttcttctcctctttcttga 632
           ||||||||||||||||||||
Sbjct: 254 tttcttctcctctttcttga 235
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 335     gccgcgagcagggcgacgagcacg 358
               ||||||||||| ||||||||||||
Sbjct: 1908821 gccgcgagcagcgcgacgagcacg 1908844
to top
>gb|AC158533.2| Mus musculus BAC clone RP23-107I15 from chromosome 14, complete
             sequence
          Length = 199608

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   ttttcttctcctctttcttg 631
             ||||||||||||||||||||
Sbjct: 49640 ttttcttctcctctttcttg 49621
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>gb|AC018616.5|AC018616 Homo sapiens chromosome 8, clone RP11-157I4, complete sequence
          Length = 165948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   accaaaattaactgcaactt 122
             ||||||||||||||||||||
Sbjct: 30150 accaaaattaactgcaactt 30131
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>emb|BX323880.7| Zebrafish DNA sequence from clone CH211-139K8 in linkage group 2,
              complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tttccttacatcagttgctg 298
              ||||||||||||||||||||
Sbjct: 111530 tttccttacatcagttgctg 111511
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 412      tttcttcctcttcaggatcgcctt 435
                ||||||||||||||||| ||||||
Sbjct: 18473105 tttcttcctcttcaggaccgcctt 18473082
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      caaaattggtctagtaagattcat 251
                |||||||| |||||||||||||||
Sbjct: 18561772 caaaattgctctagtaagattcat 18561795
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 228      caaaattggtctagtaagattcat 251
                |||||||| |||||||||||||||
Sbjct: 12461295 caaaattgctctagtaagattcat 12461318
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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    ttttccttacatcagttgct 297
              ||||||||||||||||||||
Sbjct: 181477 ttttccttacatcagttgct 181458
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>gb|AY117439.1| Streptomyces carzinostaticus subsp. neocarzinostaticus neocarzinostatin
             biosynthetic locus, complete sequence
          Length = 92294

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 626   ttcttgagcttcttctcggc 645
             ||||||||||||||||||||
Sbjct: 92240 ttcttgagcttcttctcggc 92259
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     agcagggcgacgagcacggc 360
               ||||||||||||||||||||
Sbjct: 3123448 agcagggcgacgagcacggc 3123467
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>gb|AC013719.8| Homo sapiens BAC clone RP11-270E5 from 2, complete sequence
          Length = 152996

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 591   ctggctcagttttcttcttg 610
             ||||||||||||||||||||
Sbjct: 82286 ctggctcagttttcttcttg 82305
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>gb|AC007395.3|AC007395 Homo sapiens BAC clone RP11-504O1 from 2, complete sequence
          Length = 158458

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    attctcactttaaagtacaa 56
             ||||||||||||||||||||
Sbjct: 82432 attctcactttaaagtacaa 82413
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>gb|AC063945.16| Homo sapiens 12 BAC RP11-417A9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 32993

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  actccacccaacaaacagaa 150
            ||||||||||||||||||||
Sbjct: 1150 actccacccaacaaacagaa 1169
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>gb|AC068642.25| Homo sapiens 12 BAC RP11-328J6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 59907

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   actccacccaacaaacagaa 150
             ||||||||||||||||||||
Sbjct: 59052 actccacccaacaaacagaa 59071
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>gb|AY087057.1| Arabidopsis thaliana clone 31129 mRNA, complete sequence
          Length = 425

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 613 tttcttctcctctttcttga 632
           ||||||||||||||||||||
Sbjct: 258 tttcttctcctctttcttga 239
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>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence
          Length = 178299

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     atgtttacatgcatacttat 22
             ||||||||||||||||||||
Sbjct: 72283 atgtttacatgcatacttat 72264
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   caaaattggtctagtaagattcat 251
             |||||||| |||||||||||||||
Sbjct: 14314 caaaattgctctagtaagattcat 14337
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>gb|AC091312.8| Mus musculus chromosome 3, clone RP23-333N1, complete sequence
          Length = 199026

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 611   gttttcttctcctctttctt 630
             ||||||||||||||||||||
Sbjct: 93381 gttttcttctcctctttctt 93400
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>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0463E12
          Length = 161081

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   agcttctccagtcttttcag 181
             ||||||||||||||||||||
Sbjct: 66111 agcttctccagtcttttcag 66130
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 228   caaaattggtctagtaagattcat 251
             |||||||| |||||||||||||||
Sbjct: 90528 caaaattgctctagtaagattcat 90551
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 598   agttttcttcttggttttcttctc 621
             ||||||||||||| ||||||||||
Sbjct: 60588 agttttcttcttgtttttcttctc 60611
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>dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mRNA for BRI1-KD
            interacting protein 131, complete cds
          Length = 2275

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 412  tttcttcctcttcaggatcgcctt 435
            ||||||||||||||||| ||||||
Sbjct: 1864 tttcttcctcttcaggaccgcctt 1841
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>dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19P17
          Length = 73840

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   tttcttctcctctttcttga 632
             ||||||||||||||||||||
Sbjct: 12784 tttcttctcctctttcttga 12803
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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 412   tttcttcctcttcaggatcgcctt 435
             ||||||||||||||||| ||||||
Sbjct: 55128 tttcttcctcttcaggaccgcctt 55105
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>dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168E03, full
           insert sequence
          Length = 3393

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 agcttctccagtcttttcag 181
           ||||||||||||||||||||
Sbjct: 965 agcttctccagtcttttcag 946
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>dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113F23, full
            insert sequence
          Length = 2281

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 412  tttcttcctcttcaggatcgcctt 435
            ||||||||||||||||| ||||||
Sbjct: 1893 tttcttcctcttcaggaccgcctt 1870
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>dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G07, full
            insert sequence
          Length = 2293

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 412  tttcttcctcttcaggatcgcctt 435
            ||||||||||||||||| ||||||
Sbjct: 1858 tttcttcctcttcaggaccgcctt 1835
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>dbj|AK113349.1| Ciona intestinalis cDNA, clone:ciad040n20, full insert sequence
          Length = 1866

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 599  gttttcttcttggttttctt 618
            ||||||||||||||||||||
Sbjct: 1592 gttttcttcttggttttctt 1573
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   gggcgacgagcacggccacg 364
             ||||||||||||||||||||
Sbjct: 10389 gggcgacgagcacggccacg 10370
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>gb|AF031882.1|AF031882 Euprymna morsei internal transcribed spacer region
          Length = 1285

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 334  cgccgcgagcagggcgacgagcacggcc 361
            |||| ||||||| |||||||||||||||
Sbjct: 991  cgcctcgagcagcgcgacgagcacggcc 1018
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>gb|AF031881.1|AF031881 Euprymna scolopes internal transcribed spacer region
          Length = 1359

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 334  cgccgcgagcagggcgacgagcacggcc 361
            |||| ||||||| |||||||||||||||
Sbjct: 1069 cgcctcgagcagcgcgacgagcacggcc 1096
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>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 600   ttttcttcttggttttcttc 619
             ||||||||||||||||||||
Sbjct: 20995 ttttcttcttggttttcttc 21014
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>emb|AL611930.24| Mouse DNA sequence from clone RP23-58H5 on chromosome 4, complete
             sequence
          Length = 194250

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 601   tttcttcttggttttcttct 620
             ||||||||||||||||||||
Sbjct: 79444 tttcttcttggttttcttct 79425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,150,272
Number of Sequences: 3902068
Number of extensions: 7150272
Number of successful extensions: 163134
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162055
Number of HSP's gapped (non-prelim): 1073
length of query: 688
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 665
effective length of database: 17,143,297,704
effective search space: 11400292973160
effective search space used: 11400292973160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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