ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal30i03 |
|---|---|
| Clone Library Name | barley_pub |
>HA22K_ARATH (Q6NLY8) HVA22-like protein k (AtHVA22k)| Length = 200 Score = 64.3 bits (155), Expect = 3e-10 Identities = 31/98 (31%), Positives = 53/98 (54%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKELTKFVSNHEDEIRFVENMA 489 L+WLQ P+ GSK +Y +RPF +HQA++D++++ + E+ K V +H+ EIRFV M Sbjct: 103 LVWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQLVDGVYGEMVKVVRSHQGEIRFVRAMI 162 Query: 488 IRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPD 375 + + + L + VS T + + + D Sbjct: 163 AKILGSVNEDAPRLGEIANGSPVSETNSDSESDSNHED 200
>HA22C_ARATH (Q9S784) HVA22-like protein c (AtHVA22c)| Length = 184 Score = 41.6 bits (96), Expect = 0.002 Identities = 16/53 (30%), Positives = 29/53 (54%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKELTKFVSNHEDEI 510 + WL P G++H+Y+ ++RPF+R Q +I + K+ F +D+I Sbjct: 85 ICWLVLPQFNGAEHIYKHFIRPFYRDPQRATTKIWYVPHKKFNFFPKRDDDDI 137
>HA22J_ARATH (Q8GXE9) HVA22-like protein j (AtHVA22j)| Length = 258 Score = 41.2 bits (95), Expect = 0.003 Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Frame = -3 Query: 665 IWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENMA 489 ++L +P G++HVY L+P+ +H+ +IDR I+ + ++ F+ + + ++ Sbjct: 76 VYLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQSTL 135 Query: 488 IRG-----ATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPDTPRS 363 I+G A + + +QP V++ +P +PR+ Sbjct: 136 IQGFQYVLAQSVRFSAAAANQPPTERNVNMNAQSPVEMDNDPPSPRA 182
>REEP5_PONPY (Q5RE33) Receptor expression-enhancing protein 5 (Polyposis locus| protein 1 homolog) Length = 189 Score = 38.1 bits (87), Expect = 0.024 Identities = 15/39 (38%), Positives = 28/39 (71%), Gaps = 1/39 (2%) Frame = -3 Query: 668 LIWLQFPS-NGGSKHVYRRYLRPFFRKHQAKIDRILNIL 555 L+W PS + G++ +Y+R +RPFF KH++++D ++ L Sbjct: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQVDSVVKDL 159
>REEP5_HUMAN (Q00765) Receptor expression-enhancing protein 5 (Polyposis locus| protein 1) (TB2 protein) Length = 189 Score = 37.4 bits (85), Expect = 0.041 Identities = 15/39 (38%), Positives = 28/39 (71%), Gaps = 1/39 (2%) Frame = -3 Query: 668 LIWLQFPS-NGGSKHVYRRYLRPFFRKHQAKIDRILNIL 555 L+W PS + G++ +Y+R +RPFF KH++++D ++ L Sbjct: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDL 159
>HA22G_ARATH (Q9LR09) Putative HVA22-like protein g (AtHVA22g)| Length = 166 Score = 36.6 bits (83), Expect = 0.070 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Frame = -3 Query: 665 IWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKELTKFVSNHEDEIRFVENMAI 486 I+L FP G+ +VY + RP+ KH+ +IDR L K + +D AI Sbjct: 65 IYLWFPKTKGTTYVYDSFFRPYIAKHENEIDR-------NLVKVKTRAKDMAMIYLQKAI 117 Query: 485 -RGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPDTP 369 +G T I+ + + QS S E+ T + D P Sbjct: 118 NQGQTKFFEILQYITE--QSTPKSKAEEKKETTIPKLDDP 155
>REEP5_MOUSE (Q60870) Receptor expression-enhancing protein 5 (Polyposis locus| protein 1 homolog) (TB2 protein homolog) (GP106) Length = 185 Score = 35.0 bits (79), Expect = 0.20 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 12/60 (20%) Frame = -3 Query: 668 LIWLQFPSNG-GSKHVYRRYLRPFFRKHQAKIDRIL-----------NILSKELTKFVSN 525 L+W PS G++ +YRR +RP F +H++++D ++ + +SKE+ K N Sbjct: 117 LLWCMAPSPANGAEMLYRRIIRPIFLRHESQVDSVVKDVKDKAKETADAISKEVKKATVN 176
>REEP2_MOUSE (Q8VCD6) Receptor expression-enhancing protein 2| Length = 254 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 +IWL P GS +YR+++ P + +ID I K + + + N Sbjct: 73 VIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANA 132 Query: 491 AIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPD 375 A+ A +++ + +++++ D ++ P + PD Sbjct: 133 AVTAAAKGQGVLSEKLRSFSMQDLTLIRDEDALPLQGPD 171
>HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h)| Length = 315 Score = 34.7 bits (78), Expect = 0.27 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -3 Query: 665 IWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRIL 564 I+L FP G+ +VY + +P+ KH+ +IDR L Sbjct: 76 IYLWFPKTRGTTYVYDSFFQPYVAKHENEIDRSL 109
>REEP4_RAT (Q4QQW1) Receptor expression-enhancing protein 4| Length = 257 Score = 33.9 bits (76), Expect = 0.45 Identities = 18/98 (18%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 ++WL P G+ +YR+++ P +H+ +ID I+ + +S + + + Sbjct: 73 VLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNMAASA 132 Query: 491 AIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEP 378 A++ AT + + G + +++ D ++ ++P Sbjct: 133 AVQAATKSQGALAGRLRSFSMQDLRSIPDTSAPTYQDP 170
>FKBP3_KLULA (Q6CWE8) FK506-binding protein 3 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 418 Score = 33.1 bits (74), Expect = 0.78 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -3 Query: 521 EDEIRFVENMAIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPD 375 E+E++F+ + R + T +Y+ + D PG +E ED S +E D Sbjct: 158 EEEVQFIVTGSYRVSLTGNYVKHPFDAPGYDDEDDDEEDDESYDEDEDD 206
>REEP6_HUMAN (Q96HR9) Receptor expression-enhancing protein 6 (Polyposis locus| protein 1-like 1) Length = 184 Score = 32.7 bits (73), Expect = 1.0 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 638 GSKHVYRRYLRPFFRKHQAKIDRILNILS 552 G+ +Y+R +RP F +H +DRI+N LS Sbjct: 131 GALMLYQRVVRPLFLRHHGAVDRIMNDLS 159
>HPS6_RAT (Q7M733) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein homolog) (Ruby-eye-like protein) (Ru) Length = 809 Score = 32.3 bits (72), Expect = 1.3 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 584 LDASGKTGAGIFCTHALIHHLKETGAI 664 LD SG+ G + CTH L+HH G I Sbjct: 168 LDTSGEAGTKLGCTHILLHHCPSFGLI 194
>REEP4_MOUSE (Q8K072) Receptor expression-enhancing protein 4| Length = 257 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 ++WL P G+ +YR+++ P +H+ +ID I+ + +S + + + Sbjct: 73 VLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDACIVQAKERSYETMLSFGKRSLNIAASA 132 Query: 491 AIRGATTASYIVNG 450 A++ AT + + G Sbjct: 133 AVQAATKSQGALAG 146
>REEP4_BOVIN (Q3ZCI8) Receptor expression-enhancing protein 4| Length = 257 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 ++WL P G+ +YR+++ P +H+ +ID I+ + +S + + + Sbjct: 73 VLWLLSPYTRGASMLYRKFVHPSLSRHEKEIDTYIVQAKERSYETVLSFGKRGLNIAASA 132 Query: 491 AIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEP 378 A++ AT + + G + +++ D + ++P Sbjct: 133 AVQAATKSQGALAGKLRSFSMQDLRTIPDGPAPTYQDP 170
>REEP2_HUMAN (Q9BRK0) Receptor expression-enhancing protein 2| Length = 252 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/99 (21%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 +IWL P GS +YR+++ P + +ID I K + + + N Sbjct: 73 VIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGKRGLNLAANA 132 Query: 491 AIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEPD 375 A+ A A +++ + +++++ D ++ P + PD Sbjct: 133 AVTAA--AKGVLSEKLRSFSMQDLTLIRDEDALPLQRPD 169
>HA22I_ARATH (Q8LE10) HVA22-like protein i (AtHVA22i)| Length = 296 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -3 Query: 665 IWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRIL 564 I+L +P G+ +VY + RP+ +H+ ID L Sbjct: 76 IYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSL 109
>REEP4_PONPY (Q5R598) Receptor expression-enhancing protein 4| Length = 257 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/98 (18%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 ++WL P G+ +YR+++ P +H+ +ID I+ + +S + + + Sbjct: 73 VLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETVLSFGKRGLNIAASA 132 Query: 491 AIRGATTASYIVNGLDQPGQSEEVSVTEDPNSTPTEEP 378 A++ AT + + G + +++ D + +P Sbjct: 133 AVQAATKSQGALAGRLRSFSMQDLRAIPDAPAPAYHDP 170
>YSV4_CAEEL (Q10010) Hypothetical protein T19C3.4 in chromosome III| Length = 229 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKE 546 + WL P G+ +YR+++ P +H+ ID +L E Sbjct: 73 IFWLLSPWTKGASILYRKWVHPTLNRHEKDIDALLESAKSE 113
>YOP1_USTMA (Q4P0H0) Protein YOP1| Length = 172 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKI 576 ++WL P G+K VY R +RP F Q + Sbjct: 127 IVWLMLPQTQGAKMVYSRIIRPVFLTTQKTV 157
>TOR1_SCHPO (O14356) Phosphatidylinositol 3-kinase tor1 (EC 2.7.1.137)| (PtdIns-3-kinase tor1) (PI3-kinase tor1) (PI3K tor1) Length = 2335 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/43 (27%), Positives = 22/43 (51%) Frame = +3 Query: 57 ANYAIEAWLQLARSMITRVLAIQQRMKINVHVTLESISNSHPQ 185 +N ++ WL++ +I R+ ++ +VH L I HPQ Sbjct: 1727 SNVPMDTWLEVIPQLIARIHTSSSSVRASVHQLLSDIGRVHPQ 1769
>REEP4_HUMAN (Q9H6H4) Receptor expression-enhancing protein 4| Length = 257 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDR-ILNILSKELTKFVSNHEDEIRFVENM 492 ++WL P G+ +YR+++ P +H+ +ID I+ + +S + + + Sbjct: 73 VLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETVLSFGKRGLNIAASA 132 Query: 491 AIRGATTASYIVNG 450 A++ AT + + G Sbjct: 133 AVQAATKSQGALAG 146
>YOP1_SCHPO (Q9UU91) Protein yop1| Length = 182 Score = 31.2 bits (69), Expect = 2.9 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKI 576 LIWL P G+ +YR +RP+ H +I Sbjct: 122 LIWLALPKFNGATIIYRHLIRPYITPHVIRI 152
>LEU1_SYNPX (Q7U892) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 540 Score = 30.4 bits (67), Expect = 5.0 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Frame = -3 Query: 629 HVYRRYLRPFFRKHQAKIDRILNILSKELTK---FVSNHEDEIRFVENMAIRGATTASYI 459 HV RRY PFF + Q + + ++ELTK VSN + N AI GA ++ Sbjct: 255 HVRRRYFNPFFGRDQDSPTPLSAVRTEELTKTSRLVSNLTGMV-VQPNKAIVGANAFAH- 312 Query: 458 VNGLDQPG 435 +G+ Q G Sbjct: 313 ESGIHQDG 320
>CCD45_RAT (Q5XI03) Coiled-coil domain-containing protein 45| Length = 821 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 194 STSLWVTVRNRL--ECYMHIYFHTLLDCQYSCYHA 96 S + WVT+ N L +C++H+ H L DC + + A Sbjct: 4 SEAEWVTIANNLLFKCHIHLRIHKLQDCDANVFIA 38
>CCD45_HUMAN (Q96GE4) Coiled-coil domain-containing protein 45| Length = 821 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 194 STSLWVTVRNRL--ECYMHIYFHTLLDCQYSCYHA 96 S + WVT+ N L +C++H+ H L DC + + A Sbjct: 4 SDAEWVTIANNLLFKCHIHLRIHELQDCDANVFIA 38
>CCD45_MOUSE (Q8BVV7) Coiled-coil domain-containing protein 45| Length = 827 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 194 STSLWVTVRNRL--ECYMHIYFHTLLDCQYSCYHA 96 S + WVT+ N L +C++H+ H L DC + + A Sbjct: 4 SEAEWVTIANNLLFKCHIHLRIHELQDCDANVFIA 38
>REEP3_MOUSE (Q99KK1) Receptor expression-enhancing protein 3| Length = 254 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKELTKFVSNHEDEIRFVE--- 498 +IWL P G+ +YR++L P + +ID + + +KE +E + F Sbjct: 73 VIWLLSPYTRGASLIYRKFLHPLLSSKEREIDDYI-VQAKE-----RGYETMVNFGRQGL 126 Query: 497 NMAIRGATTAS 465 N+A A TA+ Sbjct: 127 NLAAAAAVTAA 137
>LEU1_PROMA (Q7VBG1) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 536 Score = 30.0 bits (66), Expect = 6.6 Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Frame = -3 Query: 629 HVYRRYLRPFFRKHQAKIDRILNILSKELTK---FVSNHEDEIRFVENMAIRGATTASYI 459 HV RRY PFF K + I ++E+TK VSN + N AI GA ++ Sbjct: 255 HVRRRYFNPFFGKDSESPTPLTAIRTEEITKTSRLVSNLTGMV-VQPNKAIVGANAFAH- 312 Query: 458 VNGLDQPG 435 +G+ Q G Sbjct: 313 ESGIHQDG 320
>FEOB2_PORGI (Q7MVL1) Ferrous iron transport protein B homolog| Length = 725 Score = 30.0 bits (66), Expect = 6.6 Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 3/140 (2%) Frame = -3 Query: 590 HQAKIDRILNILSKELTKFVSNHEDEIRFVENMAIRGATTASYIVNGLDQPGQS---EEV 420 +++ +DR L +L + + F + I N+ I G A Y+++ LD PG V Sbjct: 549 YKSIVDRTLVVLWRAVV-FAAPAGALIWLTCNIQIGGVGIAEYLIDLLDGPGWLMGLNGV 607 Query: 419 SVTEDPNSTPTEEPDTPRS*NLSLVATPQDVSEEFGSVRNVNMCF*TSRIRFKL*EWILS 240 + + P E P L+++ T D G + + T+R+ F+ W + Sbjct: 608 ILLAYVLAIPANEIVIPTILMLTVLTTGIDGGTGAGVMFEADGTAETARL-FEAGGWTML 666 Query: 239 TCIRILLVLWCYKSCSTSLW 180 T I ++L + CST+L+ Sbjct: 667 TGINLMLFCLLHNPCSTTLF 686
>TOR2_SCHPO (Q9Y7K2) Phosphatidylinositol 3-kinase tor2 (EC 2.7.1.137)| (PtdIns-3-kinase tor2) (PI3-kinase tor2) (PI3K tor2) Length = 2337 Score = 30.0 bits (66), Expect = 6.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +3 Query: 69 IEAWLQLARSMITRVLAIQQRMKINVHVTLESISNSHPQ 185 I+ WL + +I R+ A ++ +VH L + +HPQ Sbjct: 1734 IDIWLDVIPQLIARIHASSLSVRKSVHQLLSDVGRAHPQ 1772
>REEP3_HUMAN (Q6NUK4) Receptor expression-enhancing protein 3| Length = 255 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = -3 Query: 668 LIWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILNILSKELTKFVSNHEDEIRFVE--- 498 +IWL P G+ +YR++L P + +ID + + +KE +E + F Sbjct: 73 VIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYI-VQAKE-----RGYETMVNFGRQGL 126 Query: 497 NMAIRGATTAS 465 N+A A TA+ Sbjct: 127 NLAATAAVTAA 137
>HPS6_MOUSE (Q8BLY7) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein) (Ru) Length = 805 Score = 29.6 bits (65), Expect = 8.6 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 584 LDASGKTGAGIFCTHALIHHLKETGAI 664 L+ SG+ G + CTH L+HH G I Sbjct: 168 LETSGEAGTKLGCTHILLHHCPLFGLI 194
>SYD_METTH (O26328) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 437 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%) Frame = -3 Query: 665 IWLQFPSNGGSKHVYRRYLRPFFRKHQAKIDRILN-ILSKELTKFVSNHEDEIRFVENMA 489 ++ Q + G VY + P FR + R LN ++S ++ +HED ++ +EN+ Sbjct: 198 LYKQIMMSTGLDRVYE--IAPIFRAEEHDTLRHLNEVISIDIEASFVDHEDVMKILENLV 255 Query: 488 IRGATTAS-YIVNGLDQPGQSEEVSVT 411 +R + + + L+ G++ EV T Sbjct: 256 VRVIEDVNEHCTDALETLGRTLEVPET 282 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,981,795 Number of Sequences: 219361 Number of extensions: 2123921 Number of successful extensions: 5689 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5406 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5686 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
