ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30i03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105425.1| Zea mays PCO111089 mRNA sequence 242 1e-60
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
3dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
4gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Par... 44 0.59
5dbj|AK208658.1| Mus musculus cDNA, clone:Y2G0112F14, strand:plus... 42 2.3
6gb|AC151572.2| Mus musculus BAC clone RP23-388I22 from 1, comple... 42 2.3
7gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complet... 42 2.3
8gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cance... 42 2.3
9gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 9.2
10gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 9.2
11ref|XM_873054.1| PREDICTED: Bos taurus similar to NF-kappa-B-rep... 40 9.2
12ref|XM_611972.2| PREDICTED: Bos taurus similar to NF-kappa-B-rep... 40 9.2
13gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosom... 40 9.2
14gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, comple... 40 9.2
15gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, co... 40 9.2
16gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complet... 40 9.2
17emb|BX324183.9| Human DNA sequence from clone WI2-83857E1 on chr... 40 9.2
18emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on ch... 40 9.2
19emb|AL162272.10| Human DNA sequence from clone RP11-145E8 on chr... 40 9.2
20gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's ... 40 9.2
21emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 9.2
22emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 40 9.2
23gb|AC090835.7| Homo sapiens chromosome 11, clone RP11-7O20, comp... 40 9.2
24gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, co... 40 9.2
25gb|AC008911.6| Homo sapiens chromosome 5 clone CTD-2268J5, compl... 40 9.2
26gb|AC018795.10| Homo sapiens chromosome 11, clone RP11-699C18, c... 40 9.2
27gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, comp... 40 9.2
28gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, compl... 40 9.2
29emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 i... 40 9.2
30emb|BX546505.9| Mouse DNA sequence from clone RP23-220E8 on chro... 40 9.2
31dbj|D50640.2| Homo sapiens gene for phosphodiesterase 3B, comple... 40 9.2
32emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 i... 40 9.2
33emb|BX322590.10| Mouse DNA sequence from clone RP23-14B5 on chro... 40 9.2
34dbj|BS000078.1| Pan troglodytes chromosome 22 clone:PTB-017L22, ... 40 9.2
35dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07,... 40 9.2
36gb|AC002523.1|AC002523 Homo sapiens Xq28 BACs 360 F12, GSHB-555C... 40 9.2
37emb|CR318628.8| Zebrafish DNA sequence from clone DKEY-148N22 in... 40 9.2
38dbj|AP000657.3| Homo sapiens genomic DNA, chromosome 21 clone:RP... 40 9.2
39dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.2
40emb|CT574566.2| Pan troglodytes chromosome X clone CH251-413C05 ... 40 9.2
41gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complet... 40 9.2
42emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chr... 40 9.2
43gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, co... 40 9.2
44dbj|AB010579.1| Bombyx mori gene for xanthine dehydrogenase, par... 40 9.2 
>gb|AY105425.1| Zea mays PCO111089 mRNA sequence
          Length = 1048

 Score =  242 bits (122), Expect = 1e-60
 Identities = 200/226 (88%)
 Strand = Plus / Minus

                                                                       
Query: 437 caggttggtcaagcccatttacaatgtaacttgctgttgtagcacccctgatggccatgt 496
           |||||||||| || |||||||| ||||   ||||||||||||| || ||||| ||||| |
Sbjct: 717 caggttggtcgaggccatttacgatgtggtttgctgttgtagcccctctgatagccatat 658

                                                                       
Query: 497 tctctacaaaacgaatttcatcttcatggttgctcacaaacttcgtaagttccttggaca 556
           | |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 657 tttctataaaacgaatttcatcttcatggctgctcacaaacttcgtaagttcctttgaca 598

                                                                       
Query: 557 aaatattcaggattctatcaatttttgcttgatgcttccggaaaaacgggcgcaggtatc 616
            ||||||||| |  |||||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 597 gaatattcagaaacctatcaatttttgcttgatgtttcaggaaaaatgggcgcaggtatc 538

                                                         
Query: 617 ttctgtacacatgctttgatccaccatttgaaggaaactggagcca 662
           || |||| ||||||||||||||||  |||||||| |||||||||||
Sbjct: 537 ttttgtatacatgctttgatccactgtttgaagggaactggagcca 492
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                            
Query: 544      agttccttggacaaaatattcaggattctatcaatttttgcttgatgcttccggaaaaac 603
                |||||||| || | |||||| ||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 22792458 agttccttcgatagaatatttaggattctatcgatttttgcttgatgtttcaggaaaaac 22792517

                                               
Query: 604      gggcgcaggtatcttctgtacacatgctttg 634
                || ||||  || ||||| || ||||||||||
Sbjct: 22792518 ggccgcatataccttctatatacatgctttg 22792548



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                            
Query: 470      ctgttgtagcacccctgatggccatgttctctacaaaacgaatttcatcttcatggttgc 529
                |||||| ||||||||||  |||||||| |||||  ||| | || |||||||||||| |||
Sbjct: 22792295 ctgttgaagcacccctggcggccatgtgctctatgaaatggatctcatcttcatggctgc 22792354

                          
Query: 530      tcacaaactt 539
                |||| |||||
Sbjct: 22792355 tcacgaactt 22792364



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 643      tttgaaggaaactggagcca 662
                ||||||||||||||||||||
Sbjct: 22793272 tttgaaggaaactggagcca 22793291
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1092_A07
          Length = 137081

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 78/91 (85%)
 Strand = Plus / Plus

                                                                          
Query: 544    agttccttggacaaaatattcaggattctatcaatttttgcttgatgcttccggaaaaac 603
              |||||||| || | |||||| ||||||||||| |||||||||||||| ||| ||||||||
Sbjct: 111800 agttccttcgatagaatatttaggattctatcgatttttgcttgatgtttcaggaaaaac 111859

                                             
Query: 604    gggcgcaggtatcttctgtacacatgctttg 634
              || ||||  || ||||| || ||||||||||
Sbjct: 111860 ggccgcatataccttctatatacatgctttg 111890



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                          
Query: 470    ctgttgtagcacccctgatggccatgttctctacaaaacgaatttcatcttcatggttgc 529
              |||||| ||||||||||  |||||||| |||||  ||| | || |||||||||||| |||
Sbjct: 111637 ctgttgaagcacccctggcggccatgtgctctatgaaatggatctcatcttcatggctgc 111696

                        
Query: 530    tcacaaactt 539
              |||| |||||
Sbjct: 111697 tcacgaactt 111706



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    tttgaaggaaactggagcca 662
              ||||||||||||||||||||
Sbjct: 112614 tttgaaggaaactggagcca 112633
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>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 171236

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 391    ggagttgaatttgggtcttcag 412
              ||||||||||||||||||||||
Sbjct: 119452 ggagttgaatttgggtcttcag 119473
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>dbj|AK208658.1| Mus musculus cDNA, clone:Y2G0112F14, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000065379, based on BLAT search
          Length = 380

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 376 tctggctcttctgttggagtt 396
           |||||||||||||||||||||
Sbjct: 202 tctggctcttctgttggagtt 222
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>gb|AC151572.2| Mus musculus BAC clone RP23-388I22 from 1, complete sequence
          Length = 187409

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    agagtgtttgggtaactttct 40
             |||||||||||||||||||||
Sbjct: 33963 agagtgtttgggtaactttct 33983
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>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence
          Length = 218283

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 515    catcttcatggttgctcacaa 535
              |||||||||||||||||||||
Sbjct: 154738 catcttcatggttgctcacaa 154718
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>gb|AC092470.9| Homo sapiens 12 BAC RP11-72J9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96100

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   attctatcaatttttgcttga 588
             |||||||||||||||||||||
Sbjct: 67166 attctatcaatttttgcttga 67186
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 570     tctatcaatttttgcttgat 589
               ||||||||||||||||||||
Sbjct: 1031181 tctatcaatttttgcttgat 1031200
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 570     tctatcaatttttgcttgat 589
               ||||||||||||||||||||
Sbjct: 1032031 tctatcaatttttgcttgat 1032050
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>ref|XM_873054.1| PREDICTED: Bos taurus similar to NF-kappa-B-repressing factor
            (NFKB-repressing factor) (Transcription factor NRF)
            (ITBA4 protein), transcript variant 2 (LOC540538), mRNA
          Length = 3291

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ctaatacaagtggacagtat 248
            ||||||||||||||||||||
Sbjct: 2345 ctaatacaagtggacagtat 2326
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>ref|XM_611972.2| PREDICTED: Bos taurus similar to NF-kappa-B-repressing factor
            (NFKB-repressing factor) (Transcription factor NRF)
            (ITBA4 protein), transcript variant 1 (LOC540538), mRNA
          Length = 3731

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 229  ctaatacaagtggacagtat 248
            ||||||||||||||||||||
Sbjct: 2785 ctaatacaagtggacagtat 2766
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>gb|AC132371.2| Mus musculus BAC clone RP23-477D20 from chromosome 5, complete sequence
          Length = 193291

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   cccacaaacttgtgctgcaa 198
             ||||||||||||||||||||
Sbjct: 19978 cccacaaacttgtgctgcaa 19997
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>gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, complete sequence
          Length = 143146

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    agtgtttgggtaactttctt 41
             ||||||||||||||||||||
Sbjct: 92963 agtgtttgggtaactttctt 92944
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>gb|AC110524.11| Mus musculus chromosome 9, clone RP23-403L22, complete sequence
          Length = 225122

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ggtggcaaccaagctcaggt 358
             ||||||||||||||||||||
Sbjct: 12802 ggtggcaaccaagctcaggt 12783
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>gb|AC117215.3| Mus musculus BAC clone RP23-308M1 from 7, complete sequence
          Length = 192092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 501    tacaaaacgaatttcatcttcatg 524
              ||||||||||| ||||||||||||
Sbjct: 105897 tacaaaacgaagttcatcttcatg 105874
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>emb|BX324183.9| Human DNA sequence from clone WI2-83857E1 on chromosome 22, complete
             sequence
          Length = 16216

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 518   cttcatggttgctcacaaac 537
             ||||||||||||||||||||
Sbjct: 13869 cttcatggttgctcacaaac 13850
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>emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on chromosome 13, complete
             sequence
          Length = 161317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   cttgttcagaaacacatatt 296
             ||||||||||||||||||||
Sbjct: 28750 cttgttcagaaacacatatt 28731
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>emb|AL162272.10| Human DNA sequence from clone RP11-145E8 on chromosome 10 Contains a
             novel gene (KIAA1074), the 3' end of the YME1L1 gene for
             YME1-like 1 (S. cerevisiae) and a CpG island, complete
             sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   gattctatcaatttttgctt 586
             ||||||||||||||||||||
Sbjct: 47255 gattctatcaatttttgctt 47274
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>gb|AC096310.9| Rattus norvegicus 1 BAC CH230-121B19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 218258

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   gctcttctgttggagttgaa 399
             ||||||||||||||||||||
Sbjct: 97927 gctcttctgttggagttgaa 97908
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>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    tctctacaaaacgaatttca 516
              ||||||||||||||||||||
Sbjct: 161035 tctctacaaaacgaatttca 161016
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>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 497    tctctacaaaacgaatttca 516
              ||||||||||||||||||||
Sbjct: 138963 tctctacaaaacgaatttca 138944
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>gb|AC090835.7| Homo sapiens chromosome 11, clone RP11-7O20, complete sequence
          Length = 167437

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    accaagctcaggtttcaact 365
              ||||||||||||||||||||
Sbjct: 158473 accaagctcaggtttcaact 158492
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>gb|AC091155.5| Homo sapiens chromosome 17, clone CTD1-2306D4, complete sequence
          Length = 144430

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 567  gattctatcaatttttgctt 586
            ||||||||||||||||||||
Sbjct: 9743 gattctatcaatttttgctt 9762
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>gb|AC008911.6| Homo sapiens chromosome 5 clone CTD-2268J5, complete sequence
          Length = 154963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    ttggtcaagcccatttacaa 460
              ||||||||||||||||||||
Sbjct: 126904 ttggtcaagcccatttacaa 126885
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>gb|AC018795.10| Homo sapiens chromosome 11, clone RP11-699C18, complete sequence
          Length = 187836

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    accaagctcaggtttcaact 365
              ||||||||||||||||||||
Sbjct: 147958 accaagctcaggtttcaact 147939
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>gb|AC022163.5| Homo sapiens chromosome 5 clone RP11-454F19, complete sequence
          Length = 165675

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   ttggtcaagcccatttacaa 460
             ||||||||||||||||||||
Sbjct: 77798 ttggtcaagcccatttacaa 77817
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>gb|AC020939.7| Homo sapiens chromosome 5 clone CTD-2311D2, complete sequence
          Length = 112595

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   ttggtcaagcccatttacaa 460
             ||||||||||||||||||||
Sbjct: 69622 ttggtcaagcccatttacaa 69603
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>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19,
            complete sequence
          Length = 223573

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  ataaatgtgcatgtaacact 157
            ||||||||||||||||||||
Sbjct: 6144 ataaatgtgcatgtaacact 6163
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>emb|BX546505.9| Mouse DNA sequence from clone RP23-220E8 on chromosome X, complete
            sequence
          Length = 165281

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  aacacatattcacatttcta 306
            ||||||||||||||||||||
Sbjct: 8706 aacacatattcacatttcta 8687
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>dbj|D50640.2| Homo sapiens gene for phosphodiesterase 3B, complete cds
          Length = 6966

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 346  accaagctcaggtttcaact 365
            ||||||||||||||||||||
Sbjct: 5171 accaagctcaggtttcaact 5152
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>emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 in linkage group 7,
             complete sequence
          Length = 179095

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   atgaaaataaatgtgcatgt 151
             ||||||||||||||||||||
Sbjct: 13282 atgaaaataaatgtgcatgt 13301
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>emb|BX322590.10| Mouse DNA sequence from clone RP23-14B5 on chromosome X, complete
              sequence
          Length = 223699

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    aacacatattcacatttcta 306
              ||||||||||||||||||||
Sbjct: 122643 aacacatattcacatttcta 122662
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>dbj|BS000078.1| Pan troglodytes chromosome 22 clone:PTB-017L22, map 22, complete
             sequences
          Length = 161914

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   acacatattcacatttctaa 307
             ||||||||||||||||||||
Sbjct: 51658 acacatattcacatttctaa 51677
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>dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07, map 22, complete
              sequences
          Length = 186185

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    acacatattcacatttctaa 307
              ||||||||||||||||||||
Sbjct: 181068 acacatattcacatttctaa 181087
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>gb|AC002523.1|AC002523 Homo sapiens Xq28 BACs 360 F12, GSHB-555C13, complete sequence
          Length = 228516

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aatccaacagcgtatgaaaa 138
              ||||||||||||||||||||
Sbjct: 194713 aatccaacagcgtatgaaaa 194694
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>emb|CR318628.8| Zebrafish DNA sequence from clone DKEY-148N22 in linkage group 19,
             complete sequence
          Length = 115655

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ataaatgtgcatgtaacact 157
             ||||||||||||||||||||
Sbjct: 36861 ataaatgtgcatgtaacact 36842
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>dbj|AP000657.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-662K22, complete
             sequence
          Length = 51621

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   acacatattcacatttctaa 307
             ||||||||||||||||||||
Sbjct: 18696 acacatattcacatttctaa 18715
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>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   acacatattcacatttctaa 307
             ||||||||||||||||||||
Sbjct: 63068 acacatattcacatttctaa 63087
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>emb|CT574566.2| Pan troglodytes chromosome X clone CH251-413C05 map Xq28, complete
             sequence
          Length = 161928

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aatccaacagcgtatgaaaa 138
             ||||||||||||||||||||
Sbjct: 71769 aatccaacagcgtatgaaaa 71750
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>gb|AC151839.2| Mus musculus BAC clone RP23-191M5 from 7, complete sequence
          Length = 232568

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 501   tacaaaacgaatttcatcttcatg 524
             ||||||||||| ||||||||||||
Sbjct: 48939 tacaaaacgaagttcatcttcatg 48916
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>emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chromosome 9, complete
              sequence
          Length = 232192

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ggtggcaaccaagctcaggt 358
              ||||||||||||||||||||
Sbjct: 178780 ggtggcaaccaagctcaggt 178799
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>gb|AC147742.13| Mus musculus chromosome 7, clone RP23-202M23, complete sequence
          Length = 194167

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 501   tacaaaacgaatttcatcttcatg 524
             ||||||||||| ||||||||||||
Sbjct: 84675 tacaaaacgaagttcatcttcatg 84652
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>dbj|AB010579.1| Bombyx mori gene for xanthine dehydrogenase, partial cds
          Length = 18575

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 282  tcagaaacacatattcacatttct 305
            |||||||||||| |||||||||||
Sbjct: 9914 tcagaaacacattttcacatttct 9891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,951,789
Number of Sequences: 3902068
Number of extensions: 5951789
Number of successful extensions: 107346
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107150
Number of HSP's gapped (non-prelim): 196
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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