ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30h24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469390.1| Oryza sativa (japonica cultivar-group), mRNA 297 2e-77
2dbj|AK109500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
3gb|BT016232.1| Zea mays clone Contig65 mRNA sequence 258 2e-65
4gb|AY109711.1| Zea mays CL20422_1 mRNA sequence 250 4e-63
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 4e-20
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
7gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 107 4e-20
8dbj|AK121032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
9dbj|AB061267.1| Solanum tuberosum mRNA for yippee-like protein, ... 70 9e-09
10ref|NM_115447.1| Arabidopsis thaliana unknown protein AT3G55890 ... 58 3e-05
11gb|BT015645.1| Arabidopsis thaliana At3g55900 gene, complete cds 58 3e-05
12gb|BT015134.1| Arabidopsis thaliana At3g55900 gene, complete cds 58 3e-05
13gb|BT012073.1| Arabidopsis thaliana At3g55890 mRNA sequence 58 3e-05
14gb|AY091443.1| Arabidopsis thaliana putative Yippee protein (At3... 58 3e-05
15gb|AY050951.1| Arabidopsis thaliana putative Yippee protein (At3... 58 3e-05
16emb|BX842374.1|CNS0A4PW Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
17ref|XM_778219.1| PREDICTED: Strongylocentrotus purpuratus simila... 54 5e-04
18gb|AY104347.1| Zea mays PCO063865 mRNA sequence 50 0.008
19ref|XM_508436.1| PREDICTED: Pan troglodytes similar to yippee-li... 44 0.51
20gb|BC064995.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cD... 44 0.51
21gb|BC029228.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cD... 44 0.51
22dbj|AK124577.1| Homo sapiens cDNA FLJ42586 fis, clone BRACE30092... 44 0.51
23dbj|AK054967.1| Homo sapiens cDNA FLJ30405 fis, clone BRACE2008488 44 0.51
24dbj|AK054775.1| Homo sapiens cDNA FLJ30213 fis, clone BRACE20016... 44 0.51
25dbj|AB160980.1| Cercopithecus aethiops mRNA for yippee-like 4, c... 44 0.51
26dbj|AB098738.1| Homo sapiens YPEL4 gene for yippee-like 4, compl... 44 0.51
27gb|BC112119.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cD... 44 0.51
28gb|BC104781.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cD... 44 0.51
29gb|BC111012.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cD... 44 0.51
30ref|NM_145008.1| Homo sapiens yippee-like 4 (Drosophila) (YPEL4)... 44 0.51
31dbj|AP000662.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.51
32ref|XM_426412.1| PREDICTED: Gallus gallus similar to hypothetica... 42 2.0
33emb|CR391679.1| Gallus gallus finished cDNA, clone ChEST822k20 42 2.0
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
35dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
36gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, com... 40 8.0
37ref|NM_147241.1| Arabidopsis thaliana unknown protein AT2G04235 ... 40 8.0
38gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, com... 40 8.0
39gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
40gb|AC106840.12| Mus musculus chromosome 1, clone RP24-144D4, com... 40 8.0
41gb|DQ356948.1| Crocodilepox virus, complete genome 40 8.0
42gb|AF087071.1| Uncultured bacterium MK04 16S ribosomal RNA gene,... 40 8.0
43gb|AC115000.7| Mus musculus chromosome 1, clone RP24-103F2, comp... 40 8.0
44gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, comp... 40 8.0
45gb|AY436634.1| Homo sapiens sulfotransferase, estrogen-preferrin... 40 8.0
46gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome... 40 8.0
47gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 ma... 40 8.0
48gb|AC108941.4| Homo sapiens BAC clone RP11-736K12 from 4, comple... 40 8.0
49dbj|AK145714.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 40 8.0
50emb|AJ330514.1|HSA330514 Homo sapiens genomic sequence surroundi... 40 8.0
51emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on ch... 40 8.0 
>ref|XM_469390.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 910

 Score =  297 bits (150), Expect = 2e-77
 Identities = 263/301 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 agtagtggctaccatcggggcccgataccttaaacctctccagaataaacttcccttcct 323
           |||||||||| ||||| || || || |||||| ||||||| | |||||| ||||||||||
Sbjct: 558 agtagtggctgccatcaggaccagacaccttatacctctctaaaataaatttcccttcct 499

                                                                       
Query: 324 tgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggacccgcaac 383
           |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 498 tgtacctctggctcttctcatgtgcagcttcatatttccatccaacaatggatccgcagc 439

                                                                       
Query: 384 caacacagaagatatcggaaacggtatgcagccctgtcatcatcatgcgatcctcattta 443
           |||||||||||||||| || || |||||||  || || ||||||||||||||||| ||||
Sbjct: 438 caacacagaagatatcagacacagtatgcattccggttatcatcatgcgatcctctttta 379

                                                                       
Query: 444 taccagatgtaacattgacaaccctgttgaagaggtacgccttgccgtgcttggattgga 503
             ||||| || |||||||||||| | ||||||||||||||||| ||||||||| | ||||
Sbjct: 378 ctccagaagtcacattgacaaccttattgaagaggtacgccttcccgtgcttgcaatgga 319

                                                                       
Query: 504 agttcttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgt 563
           ||  ||||||||||||||||| || |||||||||||| | | |||||  |||||||||||
Sbjct: 318 aggacttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgt 259

            
Query: 564 a 564
           |
Sbjct: 258 a 258
to top
>dbj|AK109500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F05, full
           insert sequence
          Length = 913

 Score =  297 bits (150), Expect = 2e-77
 Identities = 263/301 (87%)
 Strand = Plus / Minus

                                                                       
Query: 264 agtagtggctaccatcggggcccgataccttaaacctctccagaataaacttcccttcct 323
           |||||||||| ||||| || || || |||||| ||||||| | |||||| ||||||||||
Sbjct: 575 agtagtggctgccatcaggaccagacaccttatacctctctaaaataaatttcccttcct 516

                                                                       
Query: 324 tgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggacccgcaac 383
           |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 515 tgtacctctggctcttctcatgtgcagcttcatatttccatccaacaatggatccgcagc 456

                                                                       
Query: 384 caacacagaagatatcggaaacggtatgcagccctgtcatcatcatgcgatcctcattta 443
           |||||||||||||||| || || |||||||  || || ||||||||||||||||| ||||
Sbjct: 455 caacacagaagatatcagacacagtatgcattccggttatcatcatgcgatcctctttta 396

                                                                       
Query: 444 taccagatgtaacattgacaaccctgttgaagaggtacgccttgccgtgcttggattgga 503
             ||||| || |||||||||||| | ||||||||||||||||| ||||||||| | ||||
Sbjct: 395 ctccagaagtcacattgacaaccttattgaagaggtacgccttcccgtgcttgcaatgga 336

                                                                       
Query: 504 agttcttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgt 563
           ||  ||||||||||||||||| || |||||||||||| | | |||||  |||||||||||
Sbjct: 335 aggacttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgt 276

            
Query: 564 a 564
           |
Sbjct: 275 a 275
to top
>gb|BT016232.1| Zea mays clone Contig65 mRNA sequence
          Length = 862

 Score =  258 bits (130), Expect = 2e-65
 Identities = 279/328 (85%), Gaps = 1/328 (0%)
 Strand = Plus / Minus

                                                                       
Query: 262 ccagtagtggctaccatcggggcccgataccttaaacctctccagaataaacttcccttc 321
           |||||| ||||| || || |||||||| |||||  ||||||||||||||||||| |||||
Sbjct: 518 ccagtattggcttccgtcagggcccgacaccttgtacctctccagaataaactttccttc 459

                                                                       
Query: 322 cttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggacccgca 381
           |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||
Sbjct: 458 cttgtatctctggctcttctcatgagcagcctcatatttccatccaacgatggatccaca 399

                                                                       
Query: 382 accaacacagaagatatcggaaacggtatgcagccctgtcatcatcatgcgatcctcatt 441
            ||||||||||||||||| ||||| |||||||  |||||||||||||||||||| || ||
Sbjct: 398 gccaacacagaagatatcagaaacagtatgcattcctgtcatcatcatgcgatcttcttt 339

                                                                       
Query: 442 tataccagatgtaacattgacaaccctgttgaagaggt-acgccttgccgtgcttggatt 500
           ||  ||||| || |||||| || || | | |||||||| ||||||| |||||| || | |
Sbjct: 338 tactccagaagtcacattggcagccttatggaagaggtaacgccttcccgtgcctgcagt 279

                                                                       
Query: 501 ggaagttcttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagc 560
           |||||  ||||||||||||||||  ||| | |||||| ||||  | ||||  ||||||||
Sbjct: 278 ggaaggccttggagatgatgtcgctggcaacgccgagctgggtcctgcagtgcttgcagc 219

                                       
Query: 561 tgtaggcgttgccctcnaggtgcatcag 588
           ||||| ||||||| || |||||||||||
Sbjct: 218 tgtagacgttgccgtccaggtgcatcag 191



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 203 gcgcttcataagtcatcggtgtcgcttccaccc 235
           ||||||||||  ||||||| |||||||||||||
Sbjct: 571 gcgcttcatatatcatcggcgtcgcttccaccc 539
to top
>gb|AY109711.1| Zea mays CL20422_1 mRNA sequence
          Length = 1032

 Score =  250 bits (126), Expect = 4e-63
 Identities = 277/328 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 cccagtagtggctaccatcggggcccgataccttaaacctctccagaataaacttccctt 320
           ||||||| ||||| || || |||||||| |||||  ||||||||||||||||||| ||||
Sbjct: 438 cccagtattggcttccgtcagggcccgacaccttgtacctctccagaataaacttgcctt 497

                                                                       
Query: 321 ccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggacccgc 380
           ||||||| ||||||| |||||||||||| || ||||||||||| ||||| ||||| || |
Sbjct: 498 ccttgtatctctggcccttctcatgtgccgcatcatatttccacccaactatggatccac 557

                                                                       
Query: 381 aaccaacacagaagatatcggaaacggtatgcagccctgtcatcatcatgcgatcctcat 440
           | ||||||||||||||||| ||||| |||||||  ||||| ||||||||||| || || |
Sbjct: 558 agccaacacagaagatatcagaaacagtatgcattcctgtgatcatcatgcggtcttctt 617

                                                                       
Query: 441 ttataccagatgtaacattgacaaccctgttgaagaggtacgccttgccgtgcttggatt 500
           |||  ||||| || || ||||||||| | | ||||||||||||||||||||||||| | |
Sbjct: 618 ttactccagaagtcacgttgacaaccttatggaagaggtacgccttgccgtgcttgcact 677

                                                                       
Query: 501 ggaagttcttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagc 560
           |||||  ||||||||||||||||  ||| | |||||||||||    ||||   |||||||
Sbjct: 678 ggaaggccttggagatgatgtcgctggcaacgccgaggtgggtcttgcagtgtttgcagc 737

                                       
Query: 561 tgtaggcgttgccctcnaggtgcatcag 588
           ||||| ||||||| || |||||||||||
Sbjct: 738 tgtagacgttgccgtccaggtgcatcag 765
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 4e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 354      catatttccatccaacaatggacccgcaaccaacacagaagatatcggaaacggtatgca 413
                |||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 27709361 catatttccatccaacaatggatccgcagccaacacagaagatatcagacacagtatgca 27709302

                                                                  
Query: 414      gccctgtcatcatcatgcgatcctcatttataccagatgtaacattgaca 463
                  || || ||||||||||||||||| ||||  ||||| || |||||||||
Sbjct: 27709301 ttccggttatcatcatgcgatcctcttttactccagaagtcacattgaca 27709252



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                       
Query: 297      acctctccagaataaacttcccttccttgtacctctggctcttctcatgtgcagc 351
                ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27709496 acctctctaaaataaatttcccttccttgtacctctggctcttctcatgtgcagc 27709442



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 508      cttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgta 564
                ||||||||||||||||| || |||||||||||| | | |||||  ||||||||||||
Sbjct: 27706867 cttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgta 27706811



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 470      ttgaagaggtacgccttgccgtgcttggattggaag 505
                ||||||||||||||||| ||||||||| | ||||||
Sbjct: 27707039 ttgaagaggtacgccttcccgtgcttgcaatggaag 27707004
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 4e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 354      catatttccatccaacaatggacccgcaaccaacacagaagatatcggaaacggtatgca 413
                |||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 27800684 catatttccatccaacaatggatccgcagccaacacagaagatatcagacacagtatgca 27800625

                                                                  
Query: 414      gccctgtcatcatcatgcgatcctcatttataccagatgtaacattgaca 463
                  || || ||||||||||||||||| ||||  ||||| || |||||||||
Sbjct: 27800624 ttccggttatcatcatgcgatcctcttttactccagaagtcacattgaca 27800575



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                       
Query: 297      acctctccagaataaacttcccttccttgtacctctggctcttctcatgtgcagc 351
                ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27800819 acctctctaaaataaatttcccttccttgtacctctggctcttctcatgtgcagc 27800765



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 508      cttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgta 564
                ||||||||||||||||| || |||||||||||| | | |||||  ||||||||||||
Sbjct: 27798190 cttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgta 27798134



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 470      ttgaagaggtacgccttgccgtgcttggattggaag 505
                ||||||||||||||||| ||||||||| | ||||||
Sbjct: 27798362 ttgaagaggtacgccttcccgtgcttgcaatggaag 27798327
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
              sequence
          Length = 119329

 Score =  107 bits (54), Expect = 4e-20
 Identities = 96/110 (87%)
 Strand = Plus / Plus

                                                                          
Query: 354    catatttccatccaacaatggacccgcaaccaacacagaagatatcggaaacggtatgca 413
              |||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 104533 catatttccatccaacaatggatccgcagccaacacagaagatatcagacacagtatgca 104592

                                                                
Query: 414    gccctgtcatcatcatgcgatcctcatttataccagatgtaacattgaca 463
                || || ||||||||||||||||| ||||  ||||| || |||||||||
Sbjct: 104593 ttccggttatcatcatgcgatcctcttttactccagaagtcacattgaca 104642



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                     
Query: 297    acctctccagaataaacttcccttccttgtacctctggctcttctcatgtgcagc 351
              ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 104398 acctctctaaaataaatttcccttccttgtacctctggctcttctcatgtgcagc 104452



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                       
Query: 508    cttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgta 564
              ||||||||||||||||| || |||||||||||| | | |||||  ||||||||||||
Sbjct: 107027 cttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgta 107083



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 470    ttgaagaggtacgccttgccgtgcttggattggaag 505
              ||||||||||||||||| ||||||||| | ||||||
Sbjct: 106855 ttgaagaggtacgccttcccgtgcttgcaatggaag 106890
to top
>dbj|AK121032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050J15, full
            insert sequence
          Length = 3552

 Score =  107 bits (54), Expect = 4e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                        
Query: 354  catatttccatccaacaatggacccgcaaccaacacagaagatatcggaaacggtatgca 413
            |||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 2907 catatttccatccaacaatggatccgcagccaacacagaagatatcagacacagtatgca 2848

                                                              
Query: 414  gccctgtcatcatcatgcgatcctcatttataccagatgtaacattgaca 463
              || || ||||||||||||||||| ||||  ||||| || |||||||||
Sbjct: 2847 ttccggttatcatcatgcgatcctcttttactccagaagtcacattgaca 2798



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                   
Query: 297  acctctccagaataaacttcccttccttgtacctctggctcttctcatgtgcagc 351
            ||||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3042 acctctctaaaataaatttcccttccttgtacctctggctcttctcatgtgcagc 2988



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                    
Query: 508 cttggagatgatgtcggnggcgaggccgaggtgggcgcggcagaacttgcagctgta 564
           ||||||||||||||||| || |||||||||||| | | |||||  ||||||||||||
Sbjct: 413 cttggagatgatgtcggaggagaggccgaggtgcgtgtggcagtgcttgcagctgta 357



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 470 ttgaagaggtacgccttgccgtgcttggattggaag 505
           ||||||||||||||||| ||||||||| | ||||||
Sbjct: 585 ttgaagaggtacgccttcccgtgcttgcaatggaag 550
to top
>dbj|AB061267.1| Solanum tuberosum mRNA for yippee-like protein, complete cds
          Length = 741

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           ||||| |||||| | |||||||||||||| || | ||||||||||||||||||||| |||
Sbjct: 371 ccttctttgtacttttggctcttctcatgggcggtctcatatttccatccaacaattgac 312

                  
Query: 377 ccgcaac 383
           || ||||
Sbjct: 311 ccacaac 305
to top
>ref|NM_115447.1| Arabidopsis thaliana unknown protein AT3G55890 mRNA, complete cds
          Length = 591

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 378 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 319

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 318 ccacaaccaacacagaa 302
to top
>gb|BT015645.1| Arabidopsis thaliana At3g55900 gene, complete cds
          Length = 447

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 291 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 350

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 351 ccacaaccaacacagaa 367
to top
>gb|BT015134.1| Arabidopsis thaliana At3g55900 gene, complete cds
          Length = 1167

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 907 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 966

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 967 ccacaaccaacacagaa 983
to top
>gb|BT012073.1| Arabidopsis thaliana At3g55890 mRNA sequence
          Length = 363

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 284 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 225

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 224 ccacaaccaacacagaa 208
to top
>gb|AY091443.1| Arabidopsis thaliana putative Yippee protein (At3g55890) mRNA,
           complete cds
          Length = 397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 287 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 228

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 227 ccacaaccaacacagaa 211
to top
>gb|AY050951.1| Arabidopsis thaliana putative Yippee protein (At3g55890) mRNA,
           complete cds
          Length = 607

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 378 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 319

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 318 ccacaaccaacacagaa 302
to top
>emb|BX842374.1|CNS0A4PW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH3ZA06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1820

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 ccttccttgtacctctggctcttctcatgtgcagcctcatatttccatccaacaatggac 376
           |||||||| ||| |||||||||| |||||||||  ||| |||||||| |||||  | || 
Sbjct: 557 ccttccttatacttctggctcttttcatgtgcaaactcgtatttccagccaacgtttgat 498

                            
Query: 377 ccgcaaccaacacagaa 393
           || ||||||||||||||
Sbjct: 497 ccacaaccaacacagaa 481
to top
>ref|XM_778219.1| PREDICTED: Strongylocentrotus purpuratus similar to yippee-like 2
           (LOC578029), mRNA
          Length = 420

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 312 acttcccttccttgtacctctggctcttctcatgtgcagcctcatatttccatcc 366
           ||||||||||||||||| ||||||| ||||||  |||   |||||||||||||||
Sbjct: 367 acttcccttccttgtacttctggctgttctcaaatgcgtgctcatatttccatcc 313
to top
>gb|AY104347.1| Zea mays PCO063865 mRNA sequence
          Length = 920

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 311 aacttcccttccttgtacctctggctctt 339
           ||||| |||||||||||||||||||||||
Sbjct: 606 aacttgccttccttgtacctctggctctt 578



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 466 cctgttgaagaggtacgccttgccgtgcttg 496
           ||||||||||||||| |||||||||| ||||
Sbjct: 448 cctgttgaagaggtaggccttgccgttcttg 418
to top
>ref|XM_508436.1| PREDICTED: Pan troglodytes similar to yippee-like 4 (LOC451197),
           mRNA
          Length = 1064

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 743 ttcccttccttgtacttctggctcgtctca 714
to top
>gb|BC064995.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cDNA clone
           IMAGE:5722221)
          Length = 1679

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 695 ttcccttccttgtacttctggctcgtctca 666
to top
>gb|BC029228.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cDNA clone
           IMAGE:5172948), complete cds
          Length = 1929

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 955 ttcccttccttgtacttctggctcgtctca 926
to top
>dbj|AK124577.1| Homo sapiens cDNA FLJ42586 fis, clone BRACE3009297, highly  similar
            to Mus musculus mdgl-1
          Length = 4000

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 314  ttcccttccttgtacctctggctcttctca 343
            ||||||||||||||| |||||||| |||||
Sbjct: 3058 ttcccttccttgtacttctggctcgtctca 3029
to top
>dbj|AK054967.1| Homo sapiens cDNA FLJ30405 fis, clone BRACE2008488
          Length = 2510

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 314  ttcccttccttgtacctctggctcttctca 343
            ||||||||||||||| |||||||| |||||
Sbjct: 1568 ttcccttccttgtacttctggctcgtctca 1539
to top
>dbj|AK054775.1| Homo sapiens cDNA FLJ30213 fis, clone BRACE2001673, highly similar
           to Mus musculus mdgl-1 mRNA
          Length = 1721

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 779 ttcccttccttgtacttctggctcgtctca 750
to top
>dbj|AB160980.1| Cercopithecus aethiops mRNA for yippee-like 4, complete cds
          Length = 589

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 457 ttcccttccttgtacttctggctcgtctca 428
to top
>dbj|AB098738.1| Homo sapiens YPEL4 gene for yippee-like 4, complete cds
          Length = 1731

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 779 ttcccttccttgtacttctggctcgtctca 750
to top
>gb|BC112119.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cDNA clone
           MGC:138324 IMAGE:8327587), complete cds
          Length = 1496

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 634 ttcccttccttgtacttctggctcgtctca 605
to top
>gb|BC104781.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cDNA clone
           MGC:132441 IMAGE:8143784), complete cds
          Length = 1503

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 634 ttcccttccttgtacttctggctcgtctca 605
to top
>gb|BC111012.1| Homo sapiens yippee-like 4 (Drosophila), mRNA (cDNA clone
           IMAGE:5767593), complete cds
          Length = 1940

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 969 ttcccttccttgtacttctggctcgtctca 940
to top
>ref|NM_145008.1| Homo sapiens yippee-like 4 (Drosophila) (YPEL4), mRNA
          Length = 1721

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 314 ttcccttccttgtacctctggctcttctca 343
           ||||||||||||||| |||||||| |||||
Sbjct: 779 ttcccttccttgtacttctggctcgtctca 750
to top
>dbj|AP000662.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-33F16, complete
             sequence
          Length = 117711

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 314   ttcccttccttgtacctctggctcttctca 343
             ||||||||||||||| |||||||| |||||
Sbjct: 41510 ttcccttccttgtacttctggctcgtctca 41539
to top
>ref|XM_426412.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ30213
           (LOC428855), mRNA
          Length = 411

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 308 ataaacttcccttccttgtacctctggct 336
           ||||||||||| ||||||||| |||||||
Sbjct: 368 ataaacttcccctccttgtacttctggct 340
to top
>emb|CR391679.1| Gallus gallus finished cDNA, clone ChEST822k20
          Length = 752

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 308 ataaacttcccttccttgtacctctggct 336
           ||||||||||| ||||||||| |||||||
Sbjct: 505 ataaacttcccctccttgtacttctggct 477
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 336      tcttctcatgtgcagcctcatattt 360
                ||||||||||||||||| |||||||
Sbjct: 12295155 tcttctcatgtgcagccccatattt 12295179
to top
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1168F12
          Length = 141524

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 336   tcttctcatgtgcagcctcatattt 360
             ||||||||||||||||| |||||||
Sbjct: 78709 tcttctcatgtgcagccccatattt 78733
to top
>gb|AC134402.9| Mus musculus chromosome 5, clone RP24-301D19, complete sequence
          Length = 199834

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ggtacgccttgccgtgcttg 496
             ||||||||||||||||||||
Sbjct: 48595 ggtacgccttgccgtgcttg 48576
to top
>ref|NM_147241.1| Arabidopsis thaliana unknown protein AT2G04235 mRNA, complete cds
          Length = 3681

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 317  ccttccttgtacctctggctcttc 340
            ||||||| ||||||||||||||||
Sbjct: 2283 ccttcctagtacctctggctcttc 2306
to top
>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence
          Length = 205513

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    ctccagaataaacttccctt 320
              ||||||||||||||||||||
Sbjct: 124406 ctccagaataaacttccctt 124387
to top
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNOa0279P04, complete sequence
          Length = 32479

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 305   agaataaacttcccttccttgtacctctggct 336
             ||||| |||||||||||||||||  |||||||
Sbjct: 22618 agaatgaacttcccttccttgtatttctggct 22587
to top
>gb|AC106840.12| Mus musculus chromosome 1, clone RP24-144D4, complete sequence
          Length = 139608

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 311    aacttcccttccttgtacctctggctct 338
              |||||||||||||||| |||||| ||||
Sbjct: 129156 aacttcccttccttgtccctctgtctct 129183
to top
>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    gaacttgcagctgtaggcgt 569
              ||||||||||||||||||||
Sbjct: 141618 gaacttgcagctgtaggcgt 141637
to top
>gb|AF087071.1| Uncultured bacterium MK04 16S ribosomal RNA gene, partial sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 391  gaagatatcggaaacggtat 410
            ||||||||||||||||||||
Sbjct: 983  gaagatatcggaaacggtat 1002
to top
>gb|AC115000.7| Mus musculus chromosome 1, clone RP24-103F2, complete sequence
          Length = 191603

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 311    aacttcccttccttgtacctctggctct 338
              |||||||||||||||| |||||| ||||
Sbjct: 178995 aacttcccttccttgtccctctgtctct 178968
to top
>gb|AC159996.7| Mus musculus chromosome 5, clone RP23-46J11, complete sequence
          Length = 208036

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    ggtacgccttgccgtgcttg 496
              ||||||||||||||||||||
Sbjct: 187805 ggtacgccttgccgtgcttg 187786
to top
>gb|AY436634.1| Homo sapiens sulfotransferase, estrogen-preferring (STE) gene,
            complete cds
          Length = 20817

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 156  tccagggttatttacagaga 175
            ||||||||||||||||||||
Sbjct: 9223 tccagggttatttacagaga 9242
to top
>gb|AC154210.2| Mus musculus BAC clone RP24-113C3 from chromosome 13, complete
            sequence
          Length = 193176

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 158  cagggttatttacagagatg 177
            ||||||||||||||||||||
Sbjct: 4575 cagggttatttacagagatg 4556
to top
>gb|AC007213.6| Arabidopsis thaliana chromosome 2 clone T23O15 map RNS1, complete
             sequence
          Length = 81341

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   ccttccttgtacctctggctcttc 340
             ||||||| ||||||||||||||||
Sbjct: 73521 ccttcctagtacctctggctcttc 73498
to top
>gb|AC108941.4| Homo sapiens BAC clone RP11-736K12 from 4, complete sequence
          Length = 179273

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   tccagggttatttacagaga 175
             ||||||||||||||||||||
Sbjct: 72140 tccagggttatttacagaga 72121
to top
>dbj|AK145714.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0033A18 product:unclassifiable, full
           insert sequence
          Length = 2340

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 477 ggtacgccttgccgtgcttg 496
           ||||||||||||||||||||
Sbjct: 947 ggtacgccttgccgtgcttg 966
to top
>emb|AJ330514.1|HSA330514 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ4P-J18RS
          Length = 721

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 gccggagggacgcttttgaa 120
           ||||||||||||||||||||
Sbjct: 616 gccggagggacgcttttgaa 635
to top
>emb|CT010428.13| Mouse DNA sequence from clone RP23-304G18 on chromosome 13, complete
             sequence
          Length = 226457

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   cagggttatttacagagatg 177
             ||||||||||||||||||||
Sbjct: 50492 cagggttatttacagagatg 50511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,292,534
Number of Sequences: 3902068
Number of extensions: 4292534
Number of successful extensions: 169656
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 169517
Number of HSP's gapped (non-prelim): 137
length of query: 588
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 565
effective length of database: 17,143,297,704
effective search space: 9685963202760
effective search space used: 9685963202760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top