ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476949.1| Oryza sativa (japonica cultivar-group), mRNA 432 e-118
2dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 424 e-115
3gb|AY105419.1| Zea mays PCO110580 mRNA sequence 377 e-101
4ref|XM_476950.1| Oryza sativa (japonica cultivar-group), mRNA 369 7e-99
5dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 369 7e-99
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 363 4e-97
7dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 363 4e-97
8dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic D... 363 4e-97
9ref|XM_470414.1| Oryza sativa (japonica cultivar-group), mRNA 80 9e-12
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 9e-12
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
12gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 80 9e-12
13dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 9e-12
14dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
15dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
16emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.13
17gb|AC119734.7| Homo sapiens 3 BAC RP11-305D6 (Roswell Park Cance... 44 0.51
18gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.51
19gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the... 44 0.51
20gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, com... 42 2.0
21dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, c... 42 2.0
22dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, c... 42 2.0
23gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 2.0
24gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 2.0
25gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y... 42 2.0
26emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in... 42 2.0
27emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 ... 42 2.0
28gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 42 2.0
29ref|XM_479662.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.0
30ref|XM_877370.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 8.0
31ref|XM_877322.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 8.0
32ref|XM_865886.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 8.0
33gb|BC105507.1| Bos taurus RAB3A interacting protein (rabin3)-lik... 40 8.0
34ref|XM_453056.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C19184g ... 40 8.0
35gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence 40 8.0
36emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chr... 40 8.0
37emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.0
38emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 8.0
39gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
40emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junctio... 40 8.0
41emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chro... 40 8.0
42dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
44dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 8.0
45dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
46dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.0
47dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and ... 40 8.0
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.0
49emb|AL611923.19| Mouse DNA sequence from clone RP23-441A11 on ch... 40 8.0 
>ref|XM_476949.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score =  432 bits (218), Expect = e-118
 Identities = 340/380 (89%), Gaps = 3/380 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
           |||||||| | ||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 567 gcctgccatttggagtcctcaagaactccacccacctcgaagctcatcacatgctgctgc 508

                                                                       
Query: 269 atcccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccag 328
           || |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 507 ataccattgaagaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccag 448

                                                                       
Query: 329 acgaaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgagg 388
           ||||  ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||
Sbjct: 447 acgatgtcgaccttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgagg 388

                                                                       
Query: 389 tagacggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtg 445
           ||||||||||||  |   |||||||| |||||||||| ||||||||| ||| |  |||||
Sbjct: 387 tagacggcgccggcggcgagccagtcggggggcaggaggccgacggggaacagcttggtg 328

                                                                       
Query: 446 cggcaggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtc 505
           |||||||| | || || ||||| |||||||||||| ||||||||||| ||||||||||||
Sbjct: 327 cggcaggaggtggcgttgaagaagtaggaggtgccattggtccactcgacgtcgtaggtc 268

                                                                       
Query: 506 gggtcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtag 565
           ||||||||||||||||||| |||||||||||| ||||| || || || ||||||||||| 
Sbjct: 267 gggtcgccggagagctggccgcggatgaggttgaggttgcgcccccgcggccagtcgtaa 208

                               
Query: 566 tagaggtcgatgagctgcag 585
           ||||||||||| ||||||||
Sbjct: 207 tagaggtcgatcagctgcag 188
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>dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C07, full
           insert sequence
          Length = 869

 Score =  424 bits (214), Expect = e-115
 Identities = 339/380 (89%), Gaps = 3/380 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
           |||||||| | ||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 567 gcctgccatttggagtcctcaagaactccacccacctcgaagctcatcacatgctgctgc 508

                                                                       
Query: 269 atcccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccag 328
           || |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||
Sbjct: 507 ataccattgaagaagttccagcgaaaggggcggtgggtgacgacgtcctcgtagtaccag 448

                                                                       
Query: 329 acgaaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgagg 388
           ||||  ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||
Sbjct: 447 acgatgtcgaccttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgagg 388

                                                                       
Query: 389 tagacggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtg 445
           ||||||||||||  |   |||||||| |||||||||| ||||||||| ||| |  |||||
Sbjct: 387 tagacggcgccggcggcgagccagtcggggggcaggaggccgacggggaacagcttggtg 328

                                                                       
Query: 446 cggcaggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtc 505
           |||||||| | || || ||||| |||||||||||| ||||||||||| ||||||||||||
Sbjct: 327 cggcaggaggtggcgttgaagaagtaggaggtgccattggtccactcgacgtcgtaggtc 268

                                                                       
Query: 506 gggtcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtag 565
           ||||||||||||||||||| |||||||||||| ||||| || || || ||||||||||| 
Sbjct: 267 gggtcgccggagagctggccgcggatgaggttgaggttgcgcccccgcggccagtcgtaa 208

                               
Query: 566 tagaggtcgatgagctgcag 585
           ||||||||||| ||||||||
Sbjct: 207 tagaggtcgatcagctgcag 188
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>gb|AY105419.1| Zea mays PCO110580 mRNA sequence
          Length = 1045

 Score =  377 bits (190), Expect = e-101
 Identities = 333/380 (87%), Gaps = 3/380 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
           |||||||||| |||||| || ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 637 gcctgccacttggagtcttccagcactcctcccacctcaaagctcatcacatgctgctgc 578

                                                                       
Query: 269 atcccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccag 328
           |||||||||||||| |||||||||||||||||   ||||  ||| |||||||||||||||
Sbjct: 577 atcccattgaagaaattccagcggacggggcgaccggtggcgacttcctcgtagtaccag 518

                                                                       
Query: 329 acgaaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgagg 388
           ||||| |||||||||||||| |||||||||||||||||||||  |  |||||||||||| 
Sbjct: 517 acgaagtcgaccttggtccacaggtggcagtcgaagccgtcgacgtgctcgcggccgaga 458

                                                                       
Query: 389 tagacggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtg 445
           ||||||||||||  |   |||||||| || |||||||  || ||||| || || ||||||
Sbjct: 457 tagacggcgccggcggcgagccagtcaggcggcaggatccccacggggaaacgcatggtg 398

                                                                       
Query: 446 cggcaggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtc 505
           ||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||  |
Sbjct: 397 cggcaggacccggagtcgaagaagtaggaggtgccgttggtccactcgacgtcgtagagc 338

                                                                       
Query: 506 gggtcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtag 565
           ||||||| ||||||||||   ||||||||||| ||||| ||||| | |||||||||||||
Sbjct: 337 gggtcgctggagagctggtcccggatgaggttgaggttgcggcccctgggccagtcgtag 278

                               
Query: 566 tagaggtcgatgagctgcag 585
           || |||||||| ||||||||
Sbjct: 277 tacaggtcgatcagctgcag 258
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>ref|XM_476950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1279

 Score =  369 bits (186), Expect = 7e-99
 Identities = 326/372 (87%), Gaps = 3/372 (0%)
 Strand = Plus / Minus

                                                                       
Query: 206 ggtgcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgc 265
           ||||||||||||| ||| ||||||||  | || |||||||| ||||||||||||||||||
Sbjct: 618 ggtgcctgccacttggaatcctctagggctccacccacctcaaagctcatcacatgctgc 559

                                                                       
Query: 266 tgcatcccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtac 325
           ||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 558 tgcatcccggtgtagaagttccagcggacggggcggtgggtgacgacgtcctcgtagtac 499

                                                                       
Query: 326 cagacgaaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccg 385
           |||| ||| |||||||||||||||| ||||||||||||||||||   || ||||||||||
Sbjct: 498 cagatgaagtcgaccttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccg 439

                                                                       
Query: 386 aggtagacggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatg 442
           |||||| ||||||||  |   |||||||| |||||||||| ||||||||| ||| | | |
Sbjct: 438 aggtaggcggcgccggcggcgagccagtcggggggcaggatgccgacggggaacagcaag 379

                                                                       
Query: 443 gtgcggcaggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtag 502
           ||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||
Sbjct: 378 gtgcggcaggaggcggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtag 319

                                                                       
Query: 503 gtcgggtcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcg 562
             |||||||||||||||||||| |  || |||||| ||||| || || |  |||||||||
Sbjct: 318 accgggtcgccggagagctggccggcgacgaggttgaggttgcgccccccaggccagtcg 259

                       
Query: 563 tagtagaggtcg 574
           ||||||||||||
Sbjct: 258 tagtagaggtcg 247



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 127 gaacctgaggaggctgctcgtcgcatcg 154
           |||| |||||||||||||| ||||||||
Sbjct: 718 gaacttgaggaggctgctcatcgcatcg 691
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>dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J01, full
           insert sequence
          Length = 1279

 Score =  369 bits (186), Expect = 7e-99
 Identities = 326/372 (87%), Gaps = 3/372 (0%)
 Strand = Plus / Minus

                                                                       
Query: 206 ggtgcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgc 265
           ||||||||||||| ||| ||||||||  | || |||||||| ||||||||||||||||||
Sbjct: 618 ggtgcctgccacttggaatcctctagggctccacccacctcaaagctcatcacatgctgc 559

                                                                       
Query: 266 tgcatcccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtac 325
           ||||||||  || |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 558 tgcatcccggtgtagaagttccagcggacggggcggtgggtgacgacgtcctcgtagtac 499

                                                                       
Query: 326 cagacgaaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccg 385
           |||| ||| |||||||||||||||| ||||||||||||||||||   || ||||||||||
Sbjct: 498 cagatgaagtcgaccttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccg 439

                                                                       
Query: 386 aggtagacggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatg 442
           |||||| ||||||||  |   |||||||| |||||||||| ||||||||| ||| | | |
Sbjct: 438 aggtaggcggcgccggcggcgagccagtcggggggcaggatgccgacggggaacagcaag 379

                                                                       
Query: 443 gtgcggcaggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtag 502
           ||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||
Sbjct: 378 gtgcggcaggaggcggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtag 319

                                                                       
Query: 503 gtcgggtcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcg 562
             |||||||||||||||||||| |  || |||||| ||||| || || |  |||||||||
Sbjct: 318 accgggtcgccggagagctggccggcgacgaggttgaggttgcgccccccaggccagtcg 259

                       
Query: 563 tagtagaggtcg 574
           ||||||||||||
Sbjct: 258 tagtagaggtcg 247



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 127 gaacctgaggaggctgctcgtcgcatcg 154
           |||| |||||||||||||| ||||||||
Sbjct: 718 gaacttgaggaggctgctcatcgcatcg 691
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  363 bits (183), Expect = 4e-97
 Identities = 284/317 (89%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                           
Query: 272     ccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacg 331
               |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 4805713 ccattgaagaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacg 4805654

                                                                           
Query: 332     aaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtag 391
               |  ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||
Sbjct: 4805653 atgtcgaccttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtag 4805594

                                                                           
Query: 392     acggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcgg 448
               |||||||||  |   |||||||| |||||||||| ||||||||| ||| |  ||||||||
Sbjct: 4805593 acggcgccggcggcgagccagtcggggggcaggaggccgacggggaacagcttggtgcgg 4805534

                                                                           
Query: 449     caggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcggg 508
               ||||| | || || ||||| |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 4805533 caggaggtggcgttgaagaagtaggaggtgccattggtccactcgacgtcgtaggtcggg 4805474

                                                                           
Query: 509     tcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtag 568
               |||||||||||||||| |||||||||||| ||||| || || || ||||||||||| |||
Sbjct: 4805473 tcgccggagagctggccgcggatgaggttgaggttgcgcccccgcggccagtcgtaatag 4805414

                                
Query: 569     aggtcgatgagctgcag 585
               |||||||| ||||||||
Sbjct: 4805413 aggtcgatcagctgcag 4805397



 Score =  303 bits (153), Expect = 3e-79
 Identities = 263/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                           
Query: 279     agaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcga 338
               |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 4808220 agaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcga 4808279

                                                                           
Query: 339     ccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtagacggcgc 398
               |||||||||||| ||||||||||||||||||   || |||||||||||||||| ||||||
Sbjct: 4808280 ccttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgc 4808339

                                                                           
Query: 399     cgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacg 455
               ||  |   |||||||| |||||||||| ||||||||| ||| | | |||||||||||| |
Sbjct: 4808340 cggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggagg 4808399

                                                                           
Query: 456     cggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcgccgg 515
               |||||||||||  |||||||||||||||||||||||| |||||||||  |||||||||||
Sbjct: 4808400 cggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgg 4808459

                                                                          
Query: 516     agagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtagaggtcg 574
               ||||||||| |  || |||||| ||||| || || |  |||||||||||||||||||||
Sbjct: 4808460 agagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 4808518



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                           
Query: 206     ggtgcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgc 265
               ||||||||||||| ||| ||||||||  | || |||||||| ||||||||||||||||||
Sbjct: 4807547 ggtgcctgccacttggaatcctctagggctccacccacctcaaagctcatcacatgctgc 4807606

                       
Query: 266     tgcatccc 273
               ||||||||
Sbjct: 4807607 tgcatccc 4807614



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                           
Query: 209     gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
               |||||||| | ||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 4806236 gcctgccatttggagtcctcaagaactccacccacctcgaagctcatcacatgctgctgc 4806177

                 
Query: 269     at 270
               ||
Sbjct: 4806176 at 4806175



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                            
Query: 403      gagccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacgcggagtc 462
                ||||||| ||||| | || ||||||||||| || ||   ||||||||||||   ||||||
Sbjct: 17082948 gagccagcccgggcggagcacgccgacggggaagcgctcggtgcggcaggagcgggagtc 17082889

                                                                 
Query: 463      gaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcg 511
                ||||  | ||| ||||||||||  |||||| |||||||||  |||||||
Sbjct: 17082888 gaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcg 17082840



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 280      gaagttccagcggacggggcg 300
                |||||||||||||||||||||
Sbjct: 17083080 gaagttccagcggacggggcg 17083060



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 127     gaacctgaggaggctgctcgtcgcatcg 154
               |||| |||||||||||||| ||||||||
Sbjct: 4807447 gaacttgaggaggctgctcatcgcatcg 4807474
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0084L07
          Length = 127992

 Score =  363 bits (183), Expect = 4e-97
 Identities = 284/317 (89%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                          
Query: 272    ccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacg 331
              |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 123623 ccattgaagaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacg 123564

                                                                          
Query: 332    aaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtag 391
              |  ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||
Sbjct: 123563 atgtcgaccttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtag 123504

                                                                          
Query: 392    acggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcgg 448
              |||||||||  |   |||||||| |||||||||| ||||||||| ||| |  ||||||||
Sbjct: 123503 acggcgccggcggcgagccagtcggggggcaggaggccgacggggaacagcttggtgcgg 123444

                                                                          
Query: 449    caggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcggg 508
              ||||| | || || ||||| |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 123443 caggaggtggcgttgaagaagtaggaggtgccattggtccactcgacgtcgtaggtcggg 123384

                                                                          
Query: 509    tcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtag 568
              |||||||||||||||| |||||||||||| ||||| || || || ||||||||||| |||
Sbjct: 123383 tcgccggagagctggccgcggatgaggttgaggttgcgcccccgcggccagtcgtaatag 123324

                               
Query: 569    aggtcgatgagctgcag 585
              |||||||| ||||||||
Sbjct: 123323 aggtcgatcagctgcag 123307



 Score =  303 bits (153), Expect = 3e-79
 Identities = 263/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                          
Query: 279    agaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcga 338
              |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 126130 agaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcga 126189

                                                                          
Query: 339    ccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtagacggcgc 398
              |||||||||||| ||||||||||||||||||   || |||||||||||||||| ||||||
Sbjct: 126190 ccttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgc 126249

                                                                          
Query: 399    cgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacg 455
              ||  |   |||||||| |||||||||| ||||||||| ||| | | |||||||||||| |
Sbjct: 126250 cggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggagg 126309

                                                                          
Query: 456    cggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcgccgg 515
              |||||||||||  |||||||||||||||||||||||| |||||||||  |||||||||||
Sbjct: 126310 cggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgg 126369

                                                                         
Query: 516    agagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtagaggtcg 574
              ||||||||| |  || |||||| ||||| || || |  |||||||||||||||||||||
Sbjct: 126370 agagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 126428



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                          
Query: 206    ggtgcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgc 265
              ||||||||||||| ||| ||||||||  | || |||||||| ||||||||||||||||||
Sbjct: 125457 ggtgcctgccacttggaatcctctagggctccacccacctcaaagctcatcacatgctgc 125516

                      
Query: 266    tgcatccc 273
              ||||||||
Sbjct: 125517 tgcatccc 125524



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                          
Query: 209    gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
              |||||||| | ||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 124146 gcctgccatttggagtcctcaagaactccacccacctcgaagctcatcacatgctgctgc 124087

                
Query: 269    at 270
              ||
Sbjct: 124086 at 124085



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 127    gaacctgaggaggctgctcgtcgcatcg 154
              |||| |||||||||||||| ||||||||
Sbjct: 125357 gaacttgaggaggctgctcatcgcatcg 125384
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>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score =  363 bits (183), Expect = 4e-97
 Identities = 284/317 (89%), Gaps = 3/317 (0%)
 Strand = Plus / Minus

                                                                         
Query: 272   ccattgaagaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacg 331
             |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 80226 ccattgaagaagttccagcgaacggggcggtgggtgacgacgtcctcgtagtaccagacg 80167

                                                                         
Query: 332   aaatcgaccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtag 391
             |  ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||
Sbjct: 80166 atgtcgaccttggtccagaggtggcagtcgaagccggcgacggtctcgcggccgaggtag 80107

                                                                         
Query: 392   acggcgccgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcgg 448
             |||||||||  |   |||||||| |||||||||| ||||||||| ||| |  ||||||||
Sbjct: 80106 acggcgccggcggcgagccagtcggggggcaggaggccgacggggaacagcttggtgcgg 80047

                                                                         
Query: 449   caggacgcggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcggg 508
             ||||| | || || ||||| |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 80046 caggaggtggcgttgaagaagtaggaggtgccattggtccactcgacgtcgtaggtcggg 79987

                                                                         
Query: 509   tcgccggagagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtag 568
             |||||||||||||||| |||||||||||| ||||| || || || ||||||||||| |||
Sbjct: 79986 tcgccggagagctggccgcggatgaggttgaggttgcgcccccgcggccagtcgtaatag 79927

                              
Query: 569   aggtcgatgagctgcag 585
             |||||||| ||||||||
Sbjct: 79926 aggtcgatcagctgcag 79910



 Score =  303 bits (153), Expect = 3e-79
 Identities = 263/299 (87%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                         
Query: 279   agaagttccagcggacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcga 338
             |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 82733 agaagttccagcggacggggcggtgggtgacgacgtcctcgtagtaccagatgaagtcga 82792

                                                                         
Query: 339   ccttggtccagaggtggcagtcgaagccgtcggtggtctcgcggccgaggtagacggcgc 398
             |||||||||||| ||||||||||||||||||   || |||||||||||||||| ||||||
Sbjct: 82793 ccttggtccagacgtggcagtcgaagccgtcaacggcctcgcggccgaggtaggcggcgc 82852

                                                                         
Query: 399   cgtgg---agccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacg 455
             ||  |   |||||||| |||||||||| ||||||||| ||| | | |||||||||||| |
Sbjct: 82853 cggcggcgagccagtcggggggcaggatgccgacggggaacagcaaggtgcggcaggagg 82912

                                                                         
Query: 456   cggagtcgaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcgccgg 515
             |||||||||||  |||||||||||||||||||||||| |||||||||  |||||||||||
Sbjct: 82913 cggagtcgaagtagtaggaggtgccgttggtccactcgacgtcgtagaccgggtcgccgg 82972

                                                                        
Query: 516   agagctggctgcggatgaggttcaggttacggccgcggggccagtcgtagtagaggtcg 574
             ||||||||| |  || |||||| ||||| || || |  |||||||||||||||||||||
Sbjct: 82973 agagctggccggcgacgaggttgaggttgcgccccccaggccagtcgtagtagaggtcg 83031



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 206   ggtgcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgc 265
             ||||||||||||| ||| ||||||||  | || |||||||| ||||||||||||||||||
Sbjct: 82060 ggtgcctgccacttggaatcctctagggctccacccacctcaaagctcatcacatgctgc 82119

                     
Query: 266   tgcatccc 273
             ||||||||
Sbjct: 82120 tgcatccc 82127



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 209   gcctgccactgggagtcctctagcacccctcccacctcgaagctcatcacatgctgctgc 268
             |||||||| | ||||||||| || || || ||||||||||||||||||||||||||||||
Sbjct: 80749 gcctgccatttggagtcctcaagaactccacccacctcgaagctcatcacatgctgctgc 80690

               
Query: 269   at 270
             ||
Sbjct: 80689 at 80688



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 127   gaacctgaggaggctgctcgtcgcatcg 154
             |||| |||||||||||||| ||||||||
Sbjct: 81960 gaacttgaggaggctgctcatcgcatcg 81987
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>ref|XM_470414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 292 gacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcgaccttggtccagag 351
           ||||||||| | |||||||  ||||||||||||   || ||| ||| |||||| ||||| 
Sbjct: 447 gacggggcgtttggtgagggtgtcctcgtagtaggtgatgaagtcggccttggcccagac 388

                                                       
Query: 352 gtggcagtcgaagccgtcggtggtctcgcggccgaggtagacgg 395
           |||||||||||||||||||| ||  | |||||||||||||||||
Sbjct: 387 gtggcagtcgaagccgtcggcggggtggcggccgaggtagacgg 344
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                            
Query: 292      gacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcgaccttggtccagag 351
                ||||||||| | |||||||  ||||||||||||   || ||| ||| |||||| ||||| 
Sbjct: 35515219 gacggggcgtttggtgagggtgtcctcgtagtaggtgatgaagtcggccttggcccagac 35515278

                                                            
Query: 352      gtggcagtcgaagccgtcggtggtctcgcggccgaggtagacgg 395
                |||||||||||||||||||| ||  | |||||||||||||||||
Sbjct: 35515279 gtggcagtcgaagccgtcggcggggtggcggccgaggtagacgg 35515322
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                            
Query: 292      gacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcgaccttggtccagag 351
                ||||||||| | |||||||  ||||||||||||   || ||| ||| |||||| ||||| 
Sbjct: 35605291 gacggggcgtttggtgagggtgtcctcgtagtaggtgatgaagtcggccttggcccagac 35605350

                                                            
Query: 352      gtggcagtcgaagccgtcggtggtctcgcggccgaggtagacgg 395
                |||||||||||||||||||| ||  | |||||||||||||||||
Sbjct: 35605351 gtggcagtcgaagccgtcggcggggtggcggccgaggtagacgg 35605394
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                         
Query: 292   gacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcgaccttggtccagag 351
             ||||||||| | |||||||  ||||||||||||   || ||| ||| |||||| ||||| 
Sbjct: 48182 gacggggcgtttggtgagggtgtcctcgtagtaggtgatgaagtcggccttggcccagac 48241

                                                         
Query: 352   gtggcagtcgaagccgtcggtggtctcgcggccgaggtagacgg 395
             |||||||||||||||||||| ||  | |||||||||||||||||
Sbjct: 48242 gtggcagtcgaagccgtcggcggggtggcggccgaggtagacgg 48285
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>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full
           insert sequence
          Length = 916

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 292 gacggggcggtgggtgaggacgtcctcgtagtaccagacgaaatcgaccttggtccagag 351
           ||||||||| | |||||||  ||||||||||||   || ||| ||| |||||| ||||| 
Sbjct: 459 gacggggcgtttggtgagggtgtcctcgtagtaggtgatgaagtcggccttggcccagac 400

                                                       
Query: 352 gtggcagtcgaagccgtcggtggtctcgcggccgaggtagacgg 395
           |||||||||||||||||||| ||  | |||||||||||||||||
Sbjct: 399 gtggcagtcgaagccgtcggcggggtggcggccgaggtagacgg 356
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>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                         
Query: 403   gagccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacgcggagtc 462
             ||||||| ||||| | || ||||||||||| || ||   ||||||||||||   ||||||
Sbjct: 36074 gagccagcccgggcggagcacgccgacggggaagcgctcggtgcggcaggagcgggagtc 36015

                                                              
Query: 463   gaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcg 511
             ||||  | ||| ||||||||||  |||||| |||||||||  |||||||
Sbjct: 36014 gaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcg 35966



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 280   gaagttccagcggacggggcg 300
             |||||||||||||||||||||
Sbjct: 36206 gaagttccagcggacggggcg 36186
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>dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149J12, full
           insert sequence
          Length = 863

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 88/109 (80%)
 Strand = Plus / Minus

                                                                       
Query: 403 gagccagtccgggggcaggacgccgacgggtaaccgtatggtgcggcaggacgcggagtc 462
           ||||||| ||||| | || ||||||||||| || ||   ||||||||||||   ||||||
Sbjct: 362 gagccagcccgggcggagcacgccgacggggaagcgctcggtgcggcaggagcgggagtc 303

                                                            
Query: 463 gaagatgtaggaggtgccgttggtccactccacgtcgtaggtcgggtcg 511
           ||||  | ||| ||||||||||  |||||| |||||||||  |||||||
Sbjct: 302 gaagtagaaggtggtgccgttgtcccactcgacgtcgtagagcgggtcg 254



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 280 gaagttccagcggacggggcg 300
           |||||||||||||||||||||
Sbjct: 494 gaagttccagcggacggggcg 474
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 359     tcgaagccgtcggtggtctcgcg 381
               |||||||||||||||||||||||
Sbjct: 2915753 tcgaagccgtcggtggtctcgcg 2915775
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>gb|AC119734.7| Homo sapiens 3 BAC RP11-305D6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109642

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 39    agagtagcatgaaatggaaaga 60
             ||||||||||||||||||||||
Sbjct: 70483 agagtagcatgaaatggaaaga 70462
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 361     gaagccgtcggtggtctcgcgg 382
               ||||||||||||||||||||||
Sbjct: 2837823 gaagccgtcggtggtctcgcgg 2837844
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>gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the complete genome
          Length = 11925

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 289   gcggacggggcggtgggtgagg 310
             ||||||||||||||||||||||
Sbjct: 11791 gcggacggggcggtgggtgagg 11812
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>gb|AC146197.3| Pan troglodytes BAC clone CH251-450H3 from Y, complete sequence
          Length = 182113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    aagagtagcatgaaatggaaa 58
             |||||||||||||||||||||
Sbjct: 58493 aagagtagcatgaaatggaaa 58513
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>dbj|BS000590.1| Pan troglodytes chromosome Y clone:PTB-194A24, complete sequence
          Length = 219969

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 38   aagagtagcatgaaatggaaa 58
            |||||||||||||||||||||
Sbjct: 7603 aagagtagcatgaaatggaaa 7623
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>dbj|BS000536.1| Pan troglodytes chromosome Y clone:PTB-100K06, complete sequences
          Length = 204391

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    aagagtagcatgaaatggaaa 58
             |||||||||||||||||||||
Sbjct: 62399 aagagtagcatgaaatggaaa 62379
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 38       aagagtagcatgaaatggaaa 58
                |||||||||||||||||||||
Sbjct: 20951395 aagagtagcatgaaatggaaa 20951375
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 286     ccagcggacggggcggtgggtgagg 310
               ||||||| |||||||||||||||||
Sbjct: 3784282 ccagcgggcggggcggtgggtgagg 3784258
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>gb|AC010726.4|AC010726 Homo sapiens BAC clone RP11-224C16 from Y, complete sequence
          Length = 176524

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    aagagtagcatgaaatggaaa 58
             |||||||||||||||||||||
Sbjct: 51938 aagagtagcatgaaatggaaa 51958
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>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4,
             complete sequence
          Length = 210697

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tactttttaagctgcagatgttaca 106
             |||||||||||||| ||||||||||
Sbjct: 43628 tactttttaagctgaagatgttaca 43604
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>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4,
             complete sequence
          Length = 200352

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tactttttaagctgcagatgttaca 106
             |||||||||||||| ||||||||||
Sbjct: 83100 tactttttaagctgaagatgttaca 83076
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 492    ccacgtcgtaggtcgggtcgccggagagc 520
              ||||| ||||| |||||||||||||||||
Sbjct: 312265 ccacgccgtagctcgggtcgccggagagc 312293
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>ref|XM_479662.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 635

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 554 ggccagtcgtagtagaggtcgatgagctgcag 585
           ||||||||||||||||  ||||| ||||||||
Sbjct: 221 ggccagtcgtagtagatctcgattagctgcag 190
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>ref|XM_877370.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 5 (LOC614335), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  tggtgcggcaggacgcggag 460
            ||||||||||||||||||||
Sbjct: 1259 tggtgcggcaggacgcggag 1278
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>ref|XM_877322.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 4 (LOC614335), mRNA
          Length = 2004

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  tggtgcggcaggacgcggag 460
            ||||||||||||||||||||
Sbjct: 1016 tggtgcggcaggacgcggag 1035
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>ref|XM_865886.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 2 (LOC614335), mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  tggtgcggcaggacgcggag 460
            ||||||||||||||||||||
Sbjct: 1235 tggtgcggcaggacgcggag 1254
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>gb|BC105507.1| Bos taurus RAB3A interacting protein (rabin3)-like 1, mRNA (cDNA
            clone MGC:128938 IMAGE:8120520), complete cds
          Length = 2240

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  tggtgcggcaggacgcggag 460
            ||||||||||||||||||||
Sbjct: 1221 tggtgcggcaggacgcggag 1240
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>ref|XM_453056.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C19184g predicted mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 262 ctgctgcatcccattgaagaagtt 285
           |||||| |||||||||||||||||
Sbjct: 466 ctgctgtatcccattgaagaagtt 443
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>gb|AC087214.4| Papio anubis clone RP41-150K7, complete sequence
          Length = 141415

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    ttttaagctgcagatgttac 105
             ||||||||||||||||||||
Sbjct: 84949 ttttaagctgcagatgttac 84968
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>emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chromosome 9 Contains the
             SMC5L1 gene for SMC5 structural maintenance of chromosomes
             5-like 1 (yeast) (SMC5, KIAA0594), the BTEB1 gene for
             basic transcription element binding protein 1 (BTEB, KLF9)
             and three CpG islands, complete sequence
          Length = 182427

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 256   cacatgctgctgcatcccattgaagaag 283
             |||||||||||| |||||| ||||||||
Sbjct: 42420 cacatgctgctgaatcccagtgaagaag 42447
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 262     ctgctgcatcccattgaagaagtt 285
               |||||| |||||||||||||||||
Sbjct: 1709959 ctgctgtatcccattgaagaagtt 1709936
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 366    cgtcggtggtctcgcggccgaggt 389
              ||||||||||||||||| ||||||
Sbjct: 302307 cgtcggtggtctcgcggacgaggt 302284
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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   aagctcatcacatgctgctgcatc 271
             |||||||||||||| |||||||||
Sbjct: 14055 aagctcatcacatggtgctgcatc 14078
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>emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junction resolvase
          Length = 2000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 442 ggtgcggcaggacgcggagtcgaa 465
           |||||||||||||||||| |||||
Sbjct: 410 ggtgcggcaggacgcggattcgaa 387
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>emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chromosome 4, complete
             sequence
          Length = 110038

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gtgcctgccactgggagtcc 226
             ||||||||||||||||||||
Sbjct: 89633 gtgcctgccactgggagtcc 89652
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 248      aagctcatcacatgctgctgcatc 271
                |||||||||||||| |||||||||
Sbjct: 16135166 aagctcatcacatggtgctgcatc 16135189
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 554    ggccagtcgtagtagaggtcgatgagctgcag 585
              ||||||||||||||||  ||||| ||||||||
Sbjct: 153072 ggccagtcgtagtagatctcgattagctgcag 153041
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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    gtagacggcgccgtggagcc 407
              ||||||||||||||||||||
Sbjct: 709734 gtagacggcgccgtggagcc 709715
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>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015C07
          Length = 149079

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 554   ggccagtcgtagtagaggtcgatgagctgcag 585
             ||||||||||||||||  ||||| ||||||||
Sbjct: 68407 ggccagtcgtagtagatctcgattagctgcag 68376
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>dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068G21, full
           insert sequence
          Length = 635

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 554 ggccagtcgtagtagaggtcgatgagctgcag 585
           ||||||||||||||||  ||||| ||||||||
Sbjct: 221 ggccagtcgtagtagatctcgattagctgcag 190
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>dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and AmfT genes and 4
            ORFs, complete cds
          Length = 10657

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 377  tcgcggccgaggtagacggcgccg 400
            |||||||||||||||||| |||||
Sbjct: 9145 tcgcggccgaggtagacgccgccg 9168
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 248      aagctcatcacatgctgctgcatc 271
                |||||||||||||| |||||||||
Sbjct: 16143407 aagctcatcacatggtgctgcatc 16143430
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>emb|AL611923.19| Mouse DNA sequence from clone RP23-441A11 on chromosome 4, complete
             sequence
          Length = 63404

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   gtgcctgccactgggagtcc 226
             ||||||||||||||||||||
Sbjct: 44943 gtgcctgccactgggagtcc 44962


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,430,142
Number of Sequences: 3902068
Number of extensions: 3430142
Number of successful extensions: 58926
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58500
Number of HSP's gapped (non-prelim): 426
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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