ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal30g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 7e-87
2gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 174 3e-40
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 174 3e-40
4ref|NM_189767.1| Oryza sativa (japonica cultivar-group), predic... 92 3e-15
5ref|NM_121947.2| Arabidopsis thaliana Ran GTPase binding / chrom... 76 2e-10
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
7dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D... 60 1e-05
8gb|AC146692.14| Medicago truncatula clone mth2-7n20, complete se... 52 0.002
9ref|NM_121273.3| Arabidopsis thaliana Ran GTPase binding / chrom... 50 0.010
10gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24 46 0.15
11gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, comp... 44 0.61
12gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromo... 44 0.61
13gb|AC146373.5| Pan troglodytes BAC clone RP43-60G24 from 7, comp... 44 0.61
14gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, com... 44 0.61
15gb|AC146118.3| Pan troglodytes BAC clone RP43-23A6 from 7, compl... 44 0.61
16gb|AC093582.3| Homo sapiens BAC clone RP13-254B10 from 7, comple... 44 0.61
17gb|AC079355.6| Homo sapiens BAC clone CTD-2526L21 from 7, comple... 44 0.61
18gb|AC091812.4| Homo sapiens BAC clone RP11-613E4 from 7, complet... 44 0.61
19gb|AC096582.1| Homo sapiens BAC clone RP11-638I8 from 7, complet... 44 0.61
20gb|AC093392.4| Homo sapiens BAC clone RP11-814E24 from 7, comple... 44 0.61
21gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, compl... 44 0.61
22gb|AC004987.2| Homo sapiens PAC clone RP5-1173I20 from 7, comple... 44 0.61
23gb|AC118758.3| Homo sapiens BAC clone RP13-580B18 from 7, comple... 44 0.61
24gb|AC097646.2| Homo sapiens cosmid clone XXcos-2185C14 from 7, c... 44 0.61
25gb|AC097645.2| Homo sapiens cosmid clone XXcos-2185C4 from 7, co... 44 0.61
26gb|AC097647.2| Homo sapiens cosmid clone XXcos-2185C16 from 7, c... 44 0.61
27emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on ch... 44 0.61
28emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chr... 44 0.61
29emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on ch... 44 0.61
30emb|AL513314.12| Human DNA sequence from clone RP11-358H9 on chr... 44 0.61
31emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on ch... 44 0.61
32emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome 5, BA... 44 0.61
33gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complet... 44 0.61
34gb|AC182391.3| Pan troglodytes BAC clone CH251-510H16 from chrom... 44 0.61
35gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromos... 44 0.61
36gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, compl... 44 0.61
37gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, compl... 44 0.61
38gb|AC112517.1| Homo sapiens cosmid clone XXcos-2185C13 from 7, c... 44 0.61
39gb|AC073135.3| Homo sapiens BAC clone RP11-694O4 from 7, complet... 44 0.61
40gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromo... 44 0.61
41gb|AC115287.5| Homo sapiens chromosome 1 clone RP5-870L9, comple... 44 0.61
42gb|AC159986.4| Pan troglodytes BAC clone CH251-6M11 from chromos... 44 0.61
43gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, comple... 44 0.61
44gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, comp... 44 0.61
45gb|AC090118.2|AC090118 Homo sapiens chromosome 19 clone unknown,... 44 0.61
46gb|AC093752.2| Homo sapiens BAC clone RP11-33B1 from 4, complete... 44 0.61
47gb|AC146179.2| Pan troglodytes BAC clone RP43-36B22 from chromos... 44 0.61
48gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B... 44 0.61
49gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, comp... 44 0.61
50gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, com... 44 0.61
51gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1,... 44 0.61
52gb|AC138036.2| Homo sapiens chromosome 5 clone XXcos-B22C99, com... 44 0.61
53gb|AC138035.1| Homo sapiens chromosome 5 clone XXcos-B22C85, com... 44 0.61
54gb|AC137818.1| Homo sapiens chromosome 16 clone XXcos-y2118c8, c... 44 0.61
55gb|AC137817.1| Homo sapiens chromosome 16 clone XXcos-y2118c7, c... 44 0.61
56gb|AF109718.1|HSCOS10 Homo sapiens chromosome 3 subtelomeric region 44 0.61
57gb|AC010507.6| Homo sapiens chromosome 19 clone LLNLF-176F2, com... 44 0.61
58gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete... 42 2.4
59gb|AE013013.1| Thermoanaerobacter tengcongensis MB4, section 40 ... 42 2.4
60gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, r... 42 2.4
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
62gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, r... 42 2.4
63gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67... 42 2.4
64gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.4
65emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial se... 42 2.4
66emb|AJ409165.1|MSA409165 Medicago sativa partial mRNA for ZR4 pr... 42 2.4
67ref|NM_124288.1| Arabidopsis thaliana unknown protein AT5G49110 ... 40 9.5
68emb|CR847521.5| Zebrafish DNA sequence from clone DKEYP-79G12 in... 40 9.5
69gb|AC091053.11| Homo sapiens chromosome 11, clone RP11-152H18, c... 40 9.5
70emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chr... 40 9.5
71emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.5
72emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression o... 40 9.5
73emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in... 40 9.5
74dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.5
75gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, com... 40 9.5
76dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 9.5
77dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 9.5
78emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in... 40 9.5
79dbj|AB023028.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.5
80dbj|AK117133.1| Arabidopsis thaliana At5g20540 mRNA for unknown ... 40 9.5
81emb|AJ327982.1|HSA327982 Homo sapiens genomic sequence surroundi... 40 9.5
82emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in... 40 9.5
83emb|CR354540.12| Zebrafish DNA sequence from clone DKEY-235K4 in... 40 9.5
84gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.5
85gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.10... 40 9.5
86gb|AC132354.2| Mus musculus BAC clone RP24-112H7 from 12, comple... 40 9.5
87emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, co... 40 9.5
88emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on ch... 40 9.5 
>dbj|AK069987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G16, full
            insert sequence
          Length = 4126

 Score =  329 bits (166), Expect = 7e-87
 Identities = 345/404 (85%), Gaps = 3/404 (0%)
 Strand = Plus / Minus

                                                                        
Query: 286  tatgtcagtgaggtacatcactatcaatactggcaactgatttgtccaccacacgaacat 345
            ||||||| ||| |||||||| ||||||||||| |||| |||||||| || || |||||||
Sbjct: 3658 tatgtcaatgatgtacatcattatcaatactgccaaccgatttgtcgactactcgaacat 3599

                                                                        
Query: 346  tatacagctcgtatacccttgctcgattctcttgccaccattgctctgcttgcgtctcgc 405
            ||||| |||||||||||| ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 3598 tatactgctcgtatacccgtgcccgattctcttgccaccattgttctgcttgtgtctcgc 3539

                                                                        
Query: 406  taaaacgcttccggctgaaacgggctctcttgagatctcttgcccctccaggtagggcag 465
            | ||||||||||||||||| ||| | |||||||||||||  | |||||||||||||||||
Sbjct: 3538 tgaaacgcttccggctgaaccggaccctcttgagatctcgagtccctccaggtagggcag 3479

                                                                        
Query: 466  taagggtaatgtagacccctggttcatcttgctctacccattcagactcaggcttagagt 525
            |||| || || || |||||||||||||||||||||||||||||||| ||| ||||||| |
Sbjct: 3478 taagagtgatatacacccctggttcatcttgctctacccattcagattcatgcttagaat 3419

                                                                        
Query: 526  ccgaatcgggctgtctggttccgttcttgccaacttccaggtgagt---cttatttctaa 582
            | ||||||||  | || ||||| ||||||  || |||  ||||| |   |||||||||||
Sbjct: 3418 ctgaatcgggtagccttgttccattcttgggaatttcagggtgactcaacttatttctaa 3359

                                                                        
Query: 583  ctgaacttggtccattagaaacagtcaacccattagacccgttcgaatatggctctcctg 642
            ||||| |||||||||| ||||||  ||| |||||||| ||||| ||| | || ||||| |
Sbjct: 3358 ctgaagttggtccattggaaacaagcaaaccattagaaccgtttgaacagggttctccag 3299

                                                        
Query: 643  aatttcttgggctacctaaattctcagttgccattgatatatca 686
            || ||||||||||||| ||| |||||| ||| | ||||||||||
Sbjct: 3298 aacttcttgggctacccaaactctcagatgcaactgatatatca 3255



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                        
Query: 81   aaattggtgcgcttgcttatgcatttacagggcagattagccggctgccacgaaccattt 140
            |||||| ||| |||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 3923 aaattgatgcacttgcttatgcatttacaggacagattagccagctgccactaaccattt 3864

                                             
Query: 141  acatcacttctccttgagcaatctactttccac 173
            |||| |||||| ||||| || ||||| ||||||
Sbjct: 3863 acataacttctgcttgaacactctacattccac 3831



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 205  aatgcaagcccacattttccaaacagcag 233
            |||||||||||||||||| ||||||||||
Sbjct: 3793 aatgcaagcccacatttttcaaacagcag 3765
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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score =  174 bits (88), Expect = 3e-40
 Identities = 216/258 (83%), Gaps = 3/258 (1%)
 Strand = Plus / Plus

                                                                         
Query: 432   ctcttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttca 491
             |||||||||||||  | ||||||||||||||||||||| || || || ||||||||||||
Sbjct: 84377 ctcttgagatctcgagtccctccaggtagggcagtaagagtgatatacacccctggttca 84436

                                                                         
Query: 492   tcttgctctacccattcagactcaggcttagagtccgaatcgggctgtctggttccgttc 551
             |||||||||||||||||||| ||| ||||||| || ||||||||  | || ||||| |||
Sbjct: 84437 tcttgctctacccattcagattcatgcttagaatctgaatcgggtagccttgttccattc 84496

                                                                         
Query: 552   ttgccaacttccaggtgagt---cttatttctaactgaacttggtccattagaaacagtc 608
             |||  || |||  ||||| |   |||||||||||||||| |||||||||| ||||||  |
Sbjct: 84497 ttgggaatttcagggtgactcaacttatttctaactgaagttggtccattggaaacaagc 84556

                                                                         
Query: 609   aacccattagacccgttcgaatatggctctcctgaatttcttgggctacctaaattctca 668
             || |||||||| ||||| ||| | || ||||| ||| ||||||||||||| ||| |||||
Sbjct: 84557 aaaccattagaaccgtttgaacagggttctccagaacttcttgggctacccaaactctca 84616

                               
Query: 669   gttgccattgatatatca 686
             | ||| | ||||||||||
Sbjct: 84617 gatgcaactgatatatca 84634



 Score =  161 bits (81), Expect = 4e-36
 Identities = 123/137 (89%)
 Strand = Plus / Plus

                                                                         
Query: 286   tatgtcagtgaggtacatcactatcaatactggcaactgatttgtccaccacacgaacat 345
             ||||||| ||| |||||||| ||||||||||| |||| |||||||| || || |||||||
Sbjct: 83056 tatgtcaatgatgtacatcattatcaatactgccaaccgatttgtcgactactcgaacat 83115

                                                                         
Query: 346   tatacagctcgtatacccttgctcgattctcttgccaccattgctctgcttgcgtctcgc 405
             ||||| |||||||||||| ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 83116 tatactgctcgtatacccgtgcccgattctcttgccaccattgttctgcttgtgtctcgc 83175

                              
Query: 406   taaaacgcttccggctg 422
             | |||||||||||||||
Sbjct: 83176 tgaaacgcttccggctg 83192



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 81    aaattggtgcgcttgcttatgcatttacagggcagattagccggctgccacgaaccattt 140
             |||||| ||| |||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 82791 aaattgatgcacttgcttatgcatttacaggacagattagccagctgccactaaccattt 82850

                                              
Query: 141   acatcacttctccttgagcaatctactttccac 173
             |||| |||||| ||||| || ||||| ||||||
Sbjct: 82851 acataacttctgcttgaacactctacattccac 82883



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 205   aatgcaagcccacattttccaaacagcag 233
             |||||||||||||||||| ||||||||||
Sbjct: 82921 aatgcaagcccacatttttcaaacagcag 82949
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  174 bits (88), Expect = 3e-40
 Identities = 216/258 (83%), Gaps = 3/258 (1%)
 Strand = Plus / Plus

                                                                            
Query: 432      ctcttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttca 491
                |||||||||||||  | ||||||||||||||||||||| || || || ||||||||||||
Sbjct: 18444540 ctcttgagatctcgagtccctccaggtagggcagtaagagtgatatacacccctggttca 18444599

                                                                            
Query: 492      tcttgctctacccattcagactcaggcttagagtccgaatcgggctgtctggttccgttc 551
                |||||||||||||||||||| ||| ||||||| || ||||||||  | || ||||| |||
Sbjct: 18444600 tcttgctctacccattcagattcatgcttagaatctgaatcgggtagccttgttccattc 18444659

                                                                            
Query: 552      ttgccaacttccaggtgagt---cttatttctaactgaacttggtccattagaaacagtc 608
                |||  || |||  ||||| |   |||||||||||||||| |||||||||| ||||||  |
Sbjct: 18444660 ttgggaatttcagggtgactcaacttatttctaactgaagttggtccattggaaacaagc 18444719

                                                                            
Query: 609      aacccattagacccgttcgaatatggctctcctgaatttcttgggctacctaaattctca 668
                || |||||||| ||||| ||| | || ||||| ||| ||||||||||||| ||| |||||
Sbjct: 18444720 aaaccattagaaccgtttgaacagggttctccagaacttcttgggctacccaaactctca 18444779

                                  
Query: 669      gttgccattgatatatca 686
                | ||| | ||||||||||
Sbjct: 18444780 gatgcaactgatatatca 18444797



 Score =  161 bits (81), Expect = 4e-36
 Identities = 123/137 (89%)
 Strand = Plus / Plus

                                                                            
Query: 286      tatgtcagtgaggtacatcactatcaatactggcaactgatttgtccaccacacgaacat 345
                ||||||| ||| |||||||| ||||||||||| |||| |||||||| || || |||||||
Sbjct: 18443219 tatgtcaatgatgtacatcattatcaatactgccaaccgatttgtcgactactcgaacat 18443278

                                                                            
Query: 346      tatacagctcgtatacccttgctcgattctcttgccaccattgctctgcttgcgtctcgc 405
                ||||| |||||||||||| ||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 18443279 tatactgctcgtatacccgtgcccgattctcttgccaccattgttctgcttgtgtctcgc 18443338

                                 
Query: 406      taaaacgcttccggctg 422
                | |||||||||||||||
Sbjct: 18443339 tgaaacgcttccggctg 18443355



 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                            
Query: 81       aaattggtgcgcttgcttatgcatttacagggcagattagccggctgccacgaaccattt 140
                |||||| ||| |||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 18442954 aaattgatgcacttgcttatgcatttacaggacagattagccagctgccactaaccattt 18443013

                                                 
Query: 141      acatcacttctccttgagcaatctactttccac 173
                |||| |||||| ||||| || ||||| ||||||
Sbjct: 18443014 acataacttctgcttgaacactctacattccac 18443046



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 205      aatgcaagcccacattttccaaacagcag 233
                |||||||||||||||||| ||||||||||
Sbjct: 18443084 aatgcaagcccacatttttcaaacagcag 18443112
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>ref|NM_189767.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3261

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 157/194 (80%)
 Strand = Plus / Minus

                                                                        
Query: 322  ctgatttgtccaccacacgaacattatacagctcgtatacccttgctcgattctcttgcc 381
            ||||||| || ||||  |||||||| ||  ||| |||||||||||  |  ||||| ||||
Sbjct: 3226 ctgatttttcaaccatccgaacattgtaatgctggtatacccttgtcctgttctcctgcc 3167

                                                                        
Query: 382  accattgctctgcttgcgtctcgctaaaacgcttccggctgaaacgggctctcttgagat 441
            ||||||| ||||| || |||||||| || | |||||||||||| ||  | | ||||||||
Sbjct: 3166 accattgttctgcctgggtctcgctgaatctcttccggctgaaccgaacccgcttgagat 3107

                                                                        
Query: 442  ctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatcttgctcta 501
            |||| || |||||||| | ||| || || || ||||| || |||||||| |||||||| |
Sbjct: 3106 ctctcgcacctccaggcaaggcggttagagtgatgtaaacgcctggttcgtcttgctcca 3047

                          
Query: 502  cccattcagactca 515
            ||||||||| ||||
Sbjct: 3046 cccattcagcctca 3033



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 577  ttctaactgaacttggtccattagaa 602
            ||||||| ||||||||||||||||||
Sbjct: 2968 ttctaacagaacttggtccattagaa 2943
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>ref|NM_121947.2| Arabidopsis thaliana Ran GTPase binding / chromatin binding / zinc
            ion binding AT5G19420 mRNA, complete cds
          Length = 3682

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 107/130 (82%)
 Strand = Plus / Minus

                                                                        
Query: 380  ccaccattgctctgcttgcgtctcgctaaaacgcttccggctgaaacgggctctcttgag 439
            ||||||||  ||||||||  |||| ||||| |||||||||||||||||| | |  |||||
Sbjct: 3279 ccaccattcttctgcttgtttctcactaaaccgcttccggctgaaacggacacgtttgag 3220

                                                                        
Query: 440  atctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatcttgctc 499
            ||| ||||| ||||||| || ||| || || || ||||| || || ||||||||||| ||
Sbjct: 3219 atcccttgcacctccagctaaggctgtgagagtgatgtacacaccaggttcatcttgttc 3160

                      
Query: 500  tacccattca 509
             |||||||||
Sbjct: 3159 aacccattca 3150
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                            
Query: 434      cttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatc 493
                |||||||||||| || |||||||| | ||| || || || ||||| || |||||||| ||
Sbjct: 41918500 cttgagatctctcgcacctccaggcaaggcggttagagtgatgtaaacgcctggttcgtc 41918559

                                      
Query: 494      ttgctctacccattcagactca 515
                |||||| |||||||||| ||||
Sbjct: 41918560 ttgctccacccattcagcctca 41918581



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                            
Query: 322      ctgatttgtccaccacacgaacattatacagctcgtatacccttgctcgattctcttgcc 381
                ||||||| || ||||  |||||||| ||  ||| |||||||||||  |  ||||| ||||
Sbjct: 41918311 ctgatttttcaaccatccgaacattgtaatgctggtatacccttgtcctgttctcctgcc 41918370

                                                         
Query: 382      accattgctctgcttgcgtctcgctaaaacgcttccggctg 422
                ||||||| ||||| || |||||||| || | ||||||||||
Sbjct: 41918371 accattgttctgcctgggtctcgctgaatctcttccggctg 41918411



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 577      ttctaactgaacttggtccattagaa 602
                ||||||| ||||||||||||||||||
Sbjct: 41918646 ttctaacagaacttggtccattagaa 41918671
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>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                         
Query: 434   cttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatc 493
             |||||||||||| || |||||||| | ||| || || || ||||| || |||||||| ||
Sbjct: 20577 cttgagatctctcgcacctccaggcaaggcggttagagtgatgtaaacgcctggttcgtc 20636

                                   
Query: 494   ttgctctacccattcagactca 515
             |||||| |||||||||| ||||
Sbjct: 20637 ttgctccacccattcagcctca 20658



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 82/101 (81%)
 Strand = Plus / Plus

                                                                         
Query: 322   ctgatttgtccaccacacgaacattatacagctcgtatacccttgctcgattctcttgcc 381
             ||||||| || ||||  |||||||| ||  ||| |||||||||||  |  ||||| ||||
Sbjct: 20388 ctgatttttcaaccatccgaacattgtaatgctggtatacccttgtcctgttctcctgcc 20447

                                                      
Query: 382   accattgctctgcttgcgtctcgctaaaacgcttccggctg 422
             ||||||| ||||| || |||||||| || | ||||||||||
Sbjct: 20448 accattgttctgcctgggtctcgctgaatctcttccggctg 20488



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 577   ttctaactgaacttggtccattagaa 602
             ||||||| ||||||||||||||||||
Sbjct: 20723 ttctaacagaacttggtccattagaa 20748
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>gb|AC146692.14| Medicago truncatula clone mth2-7n20, complete sequence
          Length = 108084

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                         
Query: 430   ctctcttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggtt 489
             ||||||| |||||| || | ||||| |||||||  || || ||||| || || || ||||
Sbjct: 14003 ctctcttaagatctattacacctcctggtagggacgtgagtgtaatatatacaccaggtt 14062

                                       
Query: 490   catcttgctctacccattcagactca 515
             |||||||||| |||||||||| ||||
Sbjct: 14063 catcttgctcaacccattcagtctca 14088
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>ref|NM_121273.3| Arabidopsis thaliana Ran GTPase binding / chromatin binding / zinc
            ion binding AT5G12350 mRNA, complete cds
          Length = 3466

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 103/129 (79%)
 Strand = Plus / Minus

                                                                        
Query: 380  ccaccattgctctgcttgcgtctcgctaaaacgcttccggctgaaacgggctctcttgag 439
            |||||| || ||||||||  |||| ||||| |  || |||||||||||| | |  |||||
Sbjct: 3132 ccaccactgttctgcttgtatctcactaaacctttttcggctgaaacggacgcgtttgag 3073

                                                                        
Query: 440  atctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatcttgctc 499
            |||||| || ||||| | || ||| ||||| || || ||||| || ||||||||||| ||
Sbjct: 3072 atctctagcacctccggctaaggctgtaagagtgatatagacaccaggttcatcttgttc 3013

                     
Query: 500  tacccattc 508
             ||||||||
Sbjct: 3012 aacccattc 3004
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>gb|AF296837.1|F7K24 Arabidopsis thaliana BAC F7K24
          Length = 103024

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 62/75 (82%)
 Strand = Plus / Plus

                                                                         
Query: 435   ttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatct 494
             |||||||| ||||| ||||||| || ||| || || || ||||| || || |||||||||
Sbjct: 75318 ttgagatcccttgcacctccagctaaggctgtgagagtgatgtacacaccaggttcatct 75377

                            
Query: 495   tgctctacccattca 509
             || || |||||||||
Sbjct: 75378 tgttcaacccattca 75392
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>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence
          Length = 158864

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 129278 ccatttacatcacttctccttg 129299
to top
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete
              sequence
          Length = 206418

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 176829 ccatttacatcacttctccttg 176850
to top
>gb|AC146373.5| Pan troglodytes BAC clone RP43-60G24 from 7, complete sequence
          Length = 151517

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 74516 ccatttacatcacttctccttg 74537
to top
>gb|AC146018.3| Pan troglodytes BAC clone RP43-135A21 from 7, complete sequence
          Length = 177841

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 142138 ccatttacatcacttctccttg 142159
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>gb|AC146118.3| Pan troglodytes BAC clone RP43-23A6 from 7, complete sequence
          Length = 166241

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 74496 ccatttacatcacttctccttg 74517
to top
>gb|AC093582.3| Homo sapiens BAC clone RP13-254B10 from 7, complete sequence
          Length = 91224

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 135  ccatttacatcacttctccttg 156
            ||||||||||||||||||||||
Sbjct: 6370 ccatttacatcacttctccttg 6349
to top
>gb|AC079355.6| Homo sapiens BAC clone CTD-2526L21 from 7, complete sequence
          Length = 140241

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 53813 ccatttacatcacttctccttg 53792
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>gb|AC091812.4| Homo sapiens BAC clone RP11-613E4 from 7, complete sequence
          Length = 122943

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 102324 ccatttacatcacttctccttg 102345
to top
>gb|AC096582.1| Homo sapiens BAC clone RP11-638I8 from 7, complete sequence
          Length = 132122

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 45092 ccatttacatcacttctccttg 45071
to top
>gb|AC093392.4| Homo sapiens BAC clone RP11-814E24 from 7, complete sequence
          Length = 99597

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 81183 ccatttacatcacttctccttg 81204
to top
>gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, complete sequence
          Length = 120436

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 10633 ccatttacatcacttctccttg 10654
to top
>gb|AC004987.2| Homo sapiens PAC clone RP5-1173I20 from 7, complete sequence
          Length = 111158

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 74134 ccatttacatcacttctccttg 74155
to top
>gb|AC118758.3| Homo sapiens BAC clone RP13-580B18 from 7, complete sequence
          Length = 150813

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 85327 ccatttacatcacttctccttg 85348
to top
>gb|AC097646.2| Homo sapiens cosmid clone XXcos-2185C14 from 7, complete sequence
          Length = 42961

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  ccatttacatcacttctccttg 156
            ||||||||||||||||||||||
Sbjct: 7506 ccatttacatcacttctccttg 7527
to top
>gb|AC097645.2| Homo sapiens cosmid clone XXcos-2185C4 from 7, complete sequence
          Length = 41572

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 18429 ccatttacatcacttctccttg 18450
to top
>gb|AC097647.2| Homo sapiens cosmid clone XXcos-2185C16 from 7, complete sequence
          Length = 45470

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 40649 ccatttacatcacttctccttg 40670
to top
>emb|AL669831.13| Human DNA sequence from clone RP11-206L10 on chromosome 1 Contains
             thirteen novel genes, a novel pseudogene, a novel gene
             similar to the F-box only protein 25 gene(FBXO25), a novel
             pseudogene similar to the beta-tubulin family and a CpG
             island, complete sequence
          Length = 179567

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 48346 ccatttacatcacttctccttg 48367
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>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a
              pseudogene similar to part of DEAD/H box polypeptide 11
              (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two
              novel pseudogenes, nine novel genes, two novel proteins
              similar to the olfactory receptor family, a capicua homolog
              (Drosophila) (CIC) pseudogene and two CpG islands, complete
              sequence
          Length = 166904

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 135061 ccatttacatcacttctccttg 135082
to top
>emb|AL606534.15| Human DNA sequence from clone RP11-261C10 on chromosome 1 Contains four
             novel genes, the 5' end of a novel gene and the 3' end of
             the gene for KARP-1-binding protein (KAB), complete
             sequence
          Length = 183541

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 82876 ccatttacatcacttctccttg 82897
to top
>emb|AL513314.12| Human DNA sequence from clone RP11-358H9 on chromosome 1 Contains a
             novel gene, a capicua homolog (Drosophila) (CIC)
             pseudogene and a CpG island, complete sequence
          Length = 58205

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 51818 ccatttacatcacttctccttg 51839
to top
>emb|AL133216.10| Human DNA sequence from clone RP11-291L22 on chromosome 10 Contains the
             3' end of a gene for a novel protein similar to
             17-beta-hydroxysteroid dehydrogenase type 7 (HSD17B7), the
             gene for a novel protein similar to CDC10 cell division
             cycle 10, homolog (S. cerevisiae) (CDC10), a novel gene, a
             novel gene containing FLJ14186, a capicua homolog
             (Drosophila) (CIC) pseudogene and a CpG island, complete
             sequence
          Length = 166835

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 72993 ccatttacatcacttctccttg 72972
to top
>emb|AL592312.1|ATT2L20 Arabidopsis thaliana DNA chromosome 5, BAC clone T2L20 (ESSA project)
          Length = 98506

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                         
Query: 435   ttgagatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatct 494
             ||||||||||| || ||||| | || ||| ||||| || || ||||| || |||||||||
Sbjct: 42403 ttgagatctctagcacctccggctaaggctgtaagagtgatatagacaccaggttcatct 42344

                           
Query: 495   tgctctacccattc 508
             || || ||||||||
Sbjct: 42343 tgttcaacccattc 42330
to top
>gb|AC110079.3| Homo sapiens BAC clone RP11-384K6 from 4, complete sequence
          Length = 167099

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 36122 ccatttacatcacttctccttg 36101
to top
>gb|AC182391.3| Pan troglodytes BAC clone CH251-510H16 from chromosome 1, complete
              sequence
          Length = 188995

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 120334 ccatttacatcacttctccttg 120355
to top
>gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromosome 7, complete
             sequence
          Length = 192312

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 72222 ccatttacatcacttctccttg 72201
to top
>gb|AC122698.2| Homo sapiens chromosome 5 clone CTD-2313P7, complete sequence
          Length = 107685

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 193   agtgcaaaagaaaatgcaagcc 214
             ||||||||||||||||||||||
Sbjct: 47917 agtgcaaaagaaaatgcaagcc 47896
to top
>gb|AC093183.3| Homo sapiens chromosome 7 clone RP11-786I1, complete sequence
          Length = 174133

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 87343 ccatttacatcacttctccttg 87322
to top
>gb|AC112517.1| Homo sapiens cosmid clone XXcos-2185C13 from 7, complete sequence
          Length = 41641

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 28307 ccatttacatcacttctccttg 28328
to top
>gb|AC073135.3| Homo sapiens BAC clone RP11-694O4 from 7, complete sequence
          Length = 190016

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 26361 ccatttacatcacttctccttg 26382
to top
>gb|AC148298.3| Pan troglodytes BAC clone CH251-136E8 from chromosome 7, complete
            sequence
          Length = 168496

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  ccatttacatcacttctccttg 156
            ||||||||||||||||||||||
Sbjct: 5566 ccatttacatcacttctccttg 5587
to top
>gb|AC115287.5| Homo sapiens chromosome 1 clone RP5-870L9, complete sequence
          Length = 99182

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 40556 ccatttacatcacttctccttg 40577
to top
>gb|AC159986.4| Pan troglodytes BAC clone CH251-6M11 from chromosome 7, complete
             sequence
          Length = 165482

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 29503 ccatttacatcacttctccttg 29482
to top
>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence
          Length = 199487

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 118846 ccatttacatcacttctccttg 118825
to top
>gb|AC133919.3| Homo sapiens chromosome 16 clone RP11-356C4, complete sequence
          Length = 210446

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 181336 ccatttacatcacttctccttg 181315
to top
>gb|AC090118.2|AC090118 Homo sapiens chromosome 19 clone unknown, complete sequence
          Length = 41396

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 16462 ccatttacatcacttctccttg 16441
to top
>gb|AC093752.2| Homo sapiens BAC clone RP11-33B1 from 4, complete sequence
          Length = 130879

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 23045 ccatttacatcacttctccttg 23066
to top
>gb|AC146179.2| Pan troglodytes BAC clone RP43-36B22 from chromosome 7, complete
             sequence
          Length = 159208

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 76452 ccatttacatcacttctccttg 76431
to top
>gb|AC018638.5|AC018638 Homo sapiens chromosome 7 clone RP11-274B21, complete sequence
          Length = 176875

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 148427 ccatttacatcacttctccttg 148448
to top
>gb|AC138393.2| Homo sapiens chromosome 1 clone RP11-504P24, complete sequence
          Length = 184644

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 66425 ccatttacatcacttctccttg 66446
to top
>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence
          Length = 150642

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 135    ccatttacatcacttctccttg 156
              ||||||||||||||||||||||
Sbjct: 129359 ccatttacatcacttctccttg 129380
to top
>gb|AC005627.2|AC005627 Homo sapiens PAC clone RP4-577P23 from 1, complete sequence
          Length = 137304

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 32656 ccatttacatcacttctccttg 32635
to top
>gb|AC138036.2| Homo sapiens chromosome 5 clone XXcos-B22C99, complete sequence
          Length = 42108

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 36403 ccatttacatcacttctccttg 36382
to top
>gb|AC138035.1| Homo sapiens chromosome 5 clone XXcos-B22C85, complete sequence
          Length = 42640

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 10112 ccatttacatcacttctccttg 10091
to top
>gb|AC137818.1| Homo sapiens chromosome 16 clone XXcos-y2118c8, complete sequence
          Length = 42524

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 15794 ccatttacatcacttctccttg 15773
to top
>gb|AC137817.1| Homo sapiens chromosome 16 clone XXcos-y2118c7, complete sequence
          Length = 41891

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 135  ccatttacatcacttctccttg 156
            ||||||||||||||||||||||
Sbjct: 6682 ccatttacatcacttctccttg 6661
to top
>gb|AF109718.1|HSCOS10 Homo sapiens chromosome 3 subtelomeric region
          Length = 40247

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 23682 ccatttacatcacttctccttg 23703
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>gb|AC010507.6| Homo sapiens chromosome 19 clone LLNLF-176F2, complete sequence
          Length = 39993

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ccatttacatcacttctccttg 156
             ||||||||||||||||||||||
Sbjct: 23531 ccatttacatcacttctccttg 23552
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>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence
          Length = 175448

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    agtgcaaaagaaaatgcaagc 213
              |||||||||||||||||||||
Sbjct: 101388 agtgcaaaagaaaatgcaagc 101408
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>gb|AE013013.1| Thermoanaerobacter tengcongensis MB4, section 40 of 244 of the
            complete genome
          Length = 10590

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 642  gaatttcttgggctacctaaa 662
            |||||||||||||||||||||
Sbjct: 8066 gaatttcttgggctacctaaa 8086
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>gb|AC008352.2|AC008352 Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone
             BACR08P09, complete sequence
          Length = 181463

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 193   agtgcaaaagaaaatgcaagc 213
             |||||||||||||||||||||
Sbjct: 38058 agtgcaaaagaaaatgcaagc 38078
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 177      aagaaaaaggaggaagagtgcaaaagaaaatgc 209
                ||||||||||||||| || | ||||||||||||
Sbjct: 25943256 aagaaaaaggaggaaaagaggaaaagaaaatgc 25943224
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>gb|AC007177.1|AC007177 Drosophila melanogaster, chromosome 2R, region 59C1-59C5, P1 clones
             DS06621 and DS02186, complete sequence
          Length = 101320

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 193   agtgcaaaagaaaatgcaagc 213
             |||||||||||||||||||||
Sbjct: 40543 agtgcaaaagaaaatgcaagc 40523
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>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete
              sequence
          Length = 283700

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 193    agtgcaaaagaaaatgcaagc 213
              |||||||||||||||||||||
Sbjct: 103871 agtgcaaaagaaaatgcaagc 103891
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 177      aagaaaaaggaggaagagtgcaaaagaaaatgc 209
                ||||||||||||||| || | ||||||||||||
Sbjct: 25871432 aagaaaaaggaggaaaagaggaaaagaaaatgc 25871400
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>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of
             library Monsanto from chromosome 12 of cultivar Nipponbare
             of ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 61296

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 177   aagaaaaaggaggaagagtgcaaaagaaaatgc 209
             ||||||||||||||| || | ||||||||||||
Sbjct: 32033 aagaaaaaggaggaaaagaggaaaagaaaatgc 32065
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>emb|AJ409165.1|MSA409165 Medicago sativa partial mRNA for ZR4 protein
          Length = 901

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                       
Query: 439 gatctcttgcccctccaggtagggcagtaagggtaatgtagacccctggttcatcttgct 498
           ||||| |||| ||||| |||||||  || || ||||| || || || | |||||||||||
Sbjct: 901 gatctattgcacctcctggtagggaggtgagtgtaatatatacaccagcttcatcttgct 842

                            
Query: 499 ctacccattcagactca 515
           | |||||||||| ||||
Sbjct: 841 caacccattcagtctca 825
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>ref|NM_124288.1| Arabidopsis thaliana unknown protein AT5G49110 mRNA, complete cds
          Length = 4464

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 373  tctcttgccaccattgctctgctt 396
            |||||||||| |||||||||||||
Sbjct: 2469 tctcttgccaacattgctctgctt 2446
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>emb|CR847521.5| Zebrafish DNA sequence from clone DKEYP-79G12 in linkage group 3,
            complete sequence
          Length = 25904

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 264  tctcgcaaccaaacacatgc 283
            ||||||||||||||||||||
Sbjct: 6729 tctcgcaaccaaacacatgc 6710
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>gb|AC091053.11| Homo sapiens chromosome 11, clone RP11-152H18, complete sequence
          Length = 160740

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   agaaaaaggaggaagagtgc 197
             ||||||||||||||||||||
Sbjct: 76678 agaaaaaggaggaagagtgc 76659
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>emb|AL133319.24| Human DNA sequence from clone RP11-394G3 on chromosome 6 Contains the 5'
              end of the PDE7B gene for phosphodiesterase 7B and a novel
              gene, complete sequence
          Length = 150072

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    accaaacacatgctctatgt 290
              ||||||||||||||||||||
Sbjct: 112786 accaaacacatgctctatgt 112767
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  aaaacgcttccggctgaaac 426
            ||||||||||||||||||||
Sbjct: 7448 aaaacgcttccggctgaaac 7429
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>emb|AJ400879.1|HSA400879 Homo sapiens ST5 gene for suppression of tumorigenicity 5, L27a gene for
              ribosomal protein L27a and KIAA0298 gene
          Length = 275434

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    agaaaaaggaggaagagtgc 197
              ||||||||||||||||||||
Sbjct: 138979 agaaaaaggaggaagagtgc 138960
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>emb|BX548053.7| Zebrafish DNA sequence from clone DKEY-189G17 in linkage group 9,
              complete sequence
          Length = 210830

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    aagagtgcaaaagaaaatgc 209
              ||||||||||||||||||||
Sbjct: 135080 aagagtgcaaaagaaaatgc 135099
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     attagccggctgccacgaac 135
               ||||||||||||||||||||
Sbjct: 1929794 attagccggctgccacgaac 1929813
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>gb|AC104360.8| Homo sapiens chromosome 11, clone RP11-691A5, complete sequence
          Length = 170211

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  agaaaaaggaggaagagtgc 197
            ||||||||||||||||||||
Sbjct: 6676 agaaaaaggaggaagagtgc 6657
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>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     atattcgtggataatgggaa 60
              ||||||||||||||||||||
Sbjct: 247716 atattcgtggataatgggaa 247735
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    actccaagaaaaaggaggaa 191
              ||||||||||||||||||||
Sbjct: 771814 actccaagaaaaaggaggaa 771833
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>emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in linkage group 22,
             complete sequence
          Length = 284624

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gtggataatgggaaaattag 66
             ||||||||||||||||||||
Sbjct: 95745 gtggataatgggaaaattag 95764
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>dbj|AB023028.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K20J1
          Length = 36243

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   tctcttgccaccattgctctgctt 396
             |||||||||| |||||||||||||
Sbjct: 18146 tctcttgccaacattgctctgctt 18123
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>dbj|AK117133.1| Arabidopsis thaliana At5g20540 mRNA for unknown protein, complete
            cds, clone: RAFL16-67-A17
          Length = 1533

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 489  tcatcttgctctacccattc 508
            ||||||||||||||||||||
Sbjct: 1107 tcatcttgctctacccattc 1088
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>emb|AJ327982.1|HSA327982 Homo sapiens genomic sequence surrounding NotI site, clone NL4-CK1C
          Length = 680

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 332 caccacacgaacattataca 351
           ||||||||||||||||||||
Sbjct: 636 caccacacgaacattataca 617
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>emb|CR932358.4| Zebrafish DNA sequence from clone DKEY-105J12 in linkage group 12,
             complete sequence
          Length = 138570

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tctcgcaaccaaacacatgc 283
             ||||||||||||||||||||
Sbjct: 84240 tctcgcaaccaaacacatgc 84221
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>emb|CR354540.12| Zebrafish DNA sequence from clone DKEY-235K4 in linkage group 7,
             complete sequence
          Length = 165122

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    gaagaacaagctctaaattg 86
             ||||||||||||||||||||
Sbjct: 52303 gaagaacaagctctaaattg 52284
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     attagccggctgccacgaac 135
               ||||||||||||||||||||
Sbjct: 1951819 attagccggctgccacgaac 1951838
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>gb|AC005181.1|AC005181 Homo sapiens chromosome 17, clone hRPK.1003_J_3, complete sequence
          Length = 202763

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ccaagaaaaaggaggaagag 194
              ||||||||||||||||||||
Sbjct: 172511 ccaagaaaaaggaggaagag 172492
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>gb|AC132354.2| Mus musculus BAC clone RP24-112H7 from 12, complete sequence
          Length = 180298

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 500    tacccattcagactcaggct 519
              ||||||||||||||||||||
Sbjct: 112489 tacccattcagactcaggct 112508
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>emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, complete sequence
          Length = 210630

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     gtggataatgggaaaattag 66
              ||||||||||||||||||||
Sbjct: 193503 gtggataatgggaaaattag 193522
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>emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on chromosome 11, complete
             sequence
          Length = 161363

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   cccctccaggtagggcagta 467
             ||||||||||||||||||||
Sbjct: 25575 cccctccaggtagggcagta 25594


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,056,629
Number of Sequences: 3902068
Number of extensions: 6056629
Number of successful extensions: 119906
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119549
Number of HSP's gapped (non-prelim): 357
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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