| Clone Name | rbaal30g12 |
|---|---|
| Clone Library Name | barley_pub |
>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) Length = 618 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +2 Query: 317 WTSPSCRSPAQ-SCAVCPACPSXXXXXXXXXXPPQCKGTPPAHRKPCRG*PR 469 WT P C P S + P PS P C G P A+ C PR Sbjct: 243 WTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSCSETPR 294
>NRAM1_CHICK (P51027) Natural resistance-associated macrophage protein 1 (NRAMP| 1) Length = 555 Score = 30.0 bits (66), Expect = 5.9 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 495 LETLRRLSFLVPLGDILPEALLFLAFIIGVVAVIHSIHKVLR 620 L TLR L +L+PLG +L + F+ +++ ++ H + R Sbjct: 493 LPTLRGLGYLIPLGLLLVAYVAFVTYLLWTCSIAHGARFLAR 534
>K6PP_MOUSE (Q9WUA3) 6-phosphofructokinase type C (EC 2.7.1.11)| (Phosphofructokinase 1) (Phosphohexokinase) (Phosphofructo-1-kinase isozyme C) (PFK-C) Length = 784 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/69 (26%), Positives = 28/69 (40%) Frame = -1 Query: 629 GVSPEDFVYGVYDGHHTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPAVILGM 450 G++ ++ +YDG + GQ K+ W DV W + ILG Sbjct: 435 GIADGHKMFAIYDGFEGFANGQIKEIGWADVGGWTGQG----------------GSILGT 478 Query: 449 AFDVPGEYL 423 +PG+YL Sbjct: 479 KRTLPGKYL 487
>Y876_METJA (Q58286) Putative ABC transporter permease protein MJ0876| Length = 351 Score = 30.0 bits (66), Expect = 5.9 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +3 Query: 525 VPLGDILPEALLFLAFIIGVVAVIHSIHKVL 617 + LGD++P + + FIIGV+ +I S++ +L Sbjct: 193 ITLGDVIPMTICSIIFIIGVMFLIKSLNALL 223
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = -1 Query: 605 YGVYDGH-----HTYDEGQEKKGFWEDVSEWYQEAEPPQGFQALISWSFPPAVI 459 YG DGH HT + E++ ED+ EW + Q F A+ S + AV+ Sbjct: 1142 YGRSDGHGKTLSHTVQDRVEREYTIEDLEEWTEYRVQVQAFNAIGSGPWSQAVV 1195
>TRMD_AZOSE (Q5NXM5) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 263 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -1 Query: 365 DKPHNFEPEIYMMERSKRDKLIADYNSMDIWDFNEKYGELWDFTVNRDDLIQ 210 D PH PEIY ER + L ++ ++ W + G W R DL+Q Sbjct: 188 DCPHYTRPEIYAGERVPQVLLSGNHAAIRRWRLKQALGTTWR---RRPDLLQ 236
>LPXK_METCA (Q60B49) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 336 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 533 EWYQEAEPPQGFQALISWSFPPAVILGMAFDVPGEYLYIGAAIFIV 396 +WY EA+PP G +AL S F AV L + + +G + +V Sbjct: 15 QWYAEAQPPWGLRAL-SRGFGAAVALRRGYYRRNAKVSLGVPVIVV 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,871,987 Number of Sequences: 219361 Number of extensions: 1892417 Number of successful extensions: 4670 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4511 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4669 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)