ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal30g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 185 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 244 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 245 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 304 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 305 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 364 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 365 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 424 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 425 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 484 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 485 atcccagccat 495 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 185 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 244 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 245 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 304 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 305 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 364 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 365 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 424 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 425 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 484 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 485 atcccagccat 495 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 537 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 478 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 418 Query: 185 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 244 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 417 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 358 Query: 245 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 304 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 357 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 298 Query: 305 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 364 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 297 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 238 Query: 365 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 424 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 237 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 178 Query: 425 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 484 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 177 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 118 Query: 485 atcccagccat 495 ||||| ||||| Sbjct: 117 atcccggccat 107
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 185 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 244 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 245 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 304 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 305 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 364 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 365 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 424 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 425 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 484 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 485 atcccagccat 495 ||||| ||||| Sbjct: 114 atcccggccat 104
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 398 bits (201), Expect = e-108 Identities = 369/425 (86%) Strand = Plus / Minus Query: 71 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 130 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 606 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 547 Query: 131 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 190 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 487 Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 486 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 427 Query: 251 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 310 || |||| ||| |||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 426 tcacttggaactcgctcatgggcgaggttctctgtgtcgtcgtcgaggcgcttggtgttg 367 Query: 311 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 370 ||||| || ||||| || || ||||||||| | |||||||| ||||||| |||| ||| Sbjct: 366 agggatgtgccgctggacgccgccttgttcataccagcgttgaacttcttcatggtctcg 307 Query: 371 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 430 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 306 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 247 Query: 431 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 490 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 246 gtgggtgccttcttccgcacaaccaccggctcccagtcctgcctgatcggcccgatcccg 187 Query: 491 gccat 495 ||||| Sbjct: 186 gccat 182
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 391 bits (197), Expect = e-105 Identities = 368/425 (86%) Strand = Plus / Minus Query: 71 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 130 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 538 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 479 Query: 131 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 190 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 419 Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 418 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 359 Query: 251 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 310 || |||| ||| |||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 358 tcacttggaactcgctcatgggcgaggttctctgtgtcatcgtcgaggcgcttggtgttg 299 Query: 311 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 370 ||||| || ||||| || || ||||||||| | |||||||| |||||||| |||| ||| Sbjct: 298 agggatgtgccgctggacgccgccttgttcataccagcgttgtacttcttcatggtctcg 239 Query: 371 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 430 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 238 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 179 Query: 431 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 490 | | ||| |||||||||| || | ||||||||||||||| |||| ||| || ||||| Sbjct: 178 gtgggtgccttcttccgcacaaccaccggctcccagtcctgtctgatcggcccgatcccg 119 Query: 491 gccat 495 ||||| Sbjct: 118 gccat 114
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 335 bits (169), Expect = 9e-89 Identities = 361/425 (84%) Strand = Plus / Minus Query: 71 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 130 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 539 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 480 Query: 131 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 190 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 479 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 420 Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 419 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 360 Query: 251 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 310 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 359 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 300 Query: 311 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 370 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 299 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 240 Query: 371 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 430 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 239 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 180 Query: 431 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 490 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 179 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 120 Query: 491 gccat 495 ||||| Sbjct: 119 gccat 115
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 335 bits (169), Expect = 9e-89 Identities = 361/425 (84%) Strand = Plus / Minus Query: 71 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 130 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 664 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 605 Query: 131 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 190 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 604 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 545 Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 544 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 485 Query: 251 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 310 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 484 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 425 Query: 311 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 370 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 424 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 365 Query: 371 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 430 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 364 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 305 Query: 431 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 490 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 304 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 245 Query: 491 gccat 495 ||||| Sbjct: 244 gccat 240
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 354 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 413 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 16975284 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 16975225 Query: 414 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 473 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 16975224 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 16975165 Query: 474 tgagcggaccaatcccagccat 495 ||| |||||||||||| ||||| Sbjct: 16975164 tgatcggaccaatcccggccat 16975143 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 16977492 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 16977433 Query: 251 tcgcttgaaacacgctcat 269 || ||||| |||||||||| Sbjct: 16977432 tcacttgagacacgctcat 16977414 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 16977731 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 16977672 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 16977671 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 16977612 Query: 185 atctg 189 ||||| Sbjct: 16977611 atctg 16977607 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 265 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 324 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 16975770 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 16975711 Query: 325 agatgcagccttgttcgttccagcgttat 353 || || |||||||| ||||||||||||| Sbjct: 16975710 ggacgccgccttgtttgttccagcgttat 16975682
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 354 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 413 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 10801 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 10742 Query: 414 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 473 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 10741 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 10682 Query: 474 tgagcggaccaatcccagccat 495 ||| |||||||||||| ||||| Sbjct: 10681 tgatcggaccaatcccggccat 10660 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 13009 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 12950 Query: 251 tcgcttgaaacacgctcat 269 || ||||| |||||||||| Sbjct: 12949 tcacttgagacacgctcat 12931 Score = 105 bits (53), Expect = 1e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 65 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 124 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 13248 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 13189 Query: 125 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 184 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13188 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 13129 Query: 185 atctg 189 ||||| Sbjct: 13128 atctg 13124 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 265 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 324 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 11287 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 11228 Query: 325 agatgcagccttgttcgttccagcgttat 353 || || |||||||| ||||||||||||| Sbjct: 11227 ggacgccgccttgtttgttccagcgttat 11199
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 354 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 413 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 122295 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 122236 Query: 414 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 473 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 122235 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 122176 Query: 474 tgagcggaccaatcccagccat 495 ||| |||||||||||| ||||| Sbjct: 122175 tgatcggaccaatcccggccat 122154 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 191 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 250 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 124503 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 124444 Query: 251 tcgcttgaaacacgctcat 269 || ||||| |||||||||| Sbjct: 124443 tcacttgagacacgctcat 124425 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 127 gttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcat 186 ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124680 gttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatcat 124621 Query: 187 ctg 189 ||| Sbjct: 124620 ctg 124618 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 265 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 324 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 122781 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 122722 Query: 325 agatgcagccttgttcgttccagcgttat 353 || || |||||||| ||||||||||||| Sbjct: 122721 ggacgccgccttgtttgttccagcgttat 122693
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 89.7 bits (45), Expect = 9e-15 Identities = 222/281 (79%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttccccgactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 143 cccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcc 202 ||||||||||||||||||||||| || ||||||||| |||| || ||||||||||||||| Sbjct: 37003 cccgactcgtactcctggatcacttgaggcttctcactgataatttgagcaagttgtgcc 36944 Query: 203 tgggtcatcttcttatccagccttgcttgcat 234 || || | |||||| |||| ||| | |||||| Sbjct: 36943 tgagtaagcttcttgtccatcctagtttgcat 36912
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 573 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 514 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 187 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 513 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 454 Query: 188 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 247 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 453 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 394 Query: 248 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 307 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 393 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 334 Query: 308 ttgagggaagttccgctagatgcagccttgttcgttccagc 348 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 333 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 293
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 131 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 190 ||||||||||| || ||||| ||||||||||| | || ||||||||||| |||| ||| Sbjct: 423 ggaatcgcctttccagactcatactcctggatgatttgaggcttctcatttatcaactgg 364 Query: 191 gcaagttgtgcctgggtcatcttcttatc 219 |||||||| |||||||||| ||||||||| Sbjct: 363 gcaagttgagcctgggtcagcttcttatc 335 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Minus Query: 363 tggtgtcgatctcggcgccggagcggcgggcagcgttgacggc 405 |||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 191 tggtttcgatctcagcaccggagcgacgggcggcgttgacggc 149
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 8479 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 8420 Query: 128 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatca 185 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 8419 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatca 8362 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| |||||||||||||||| |||||| Sbjct: 7831 ccgcttgatgcagccttgttcgatccagc 7803
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 199 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 200 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 259 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 260 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 319 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 199 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 356 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 297 Query: 200 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 259 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 296 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 237 Query: 260 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 319 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 236 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 177 Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| ||||| |||||||| |||||||| Sbjct: 176 ccgcttgatgccgccttgttggttccagc 148
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 199 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 420 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 361 Query: 200 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 259 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 360 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 301 Query: 260 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 319 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 300 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 241 Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| ||||| |||||||| |||||||| Sbjct: 240 ccgcttgatgccgccttgttggttccagc 212
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 199 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 411 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 352 Query: 200 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 259 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 351 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 292 Query: 260 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 319 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 291 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgtttagagatgtg 232 Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| ||||| |||||||| |||||||| Sbjct: 231 ccgcttgatgccgccttgttggttccagc 203
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 73.8 bits (37), Expect = 5e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 199 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 200 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 259 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 260 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 319 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 73.8 bits (37), Expect = 5e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 116 attatctgattgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttc 175 |||||||| | ||| ||||| ||||| ||||||||||| || ||||| | |||||||||| Sbjct: 394 attatctgttggtttggaattgcctttcccgactcgtattcttggataatctgtggcttc 335 Query: 176 tcattgatcatctgagcaagttgtgcctgggtcatcttctt 216 ||||| |||| ||||||||||| | ||| |||| |||||| Sbjct: 334 tcatttatcaattgagcaagttgagactgagtcagcttctt 294 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 368 tcgatctcggcgccggagcggcgggcagcgttgacggc 405 |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 142 tcgatctcggcgccggagcgacgggcggcgttaacggc 105
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 68 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 127 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 496 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 437 Query: 128 ttcggaatcgccttgccc-gactcgtactcctggatcacctgtggcttctcattgatca 185 |||||||| || || | | |||||||| || |||||||| ||||||||||||||||||| Sbjct: 436 ttcggaattgctttccacagactcgtattcttggatcacttgtggcttctcattgatca 378 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 320 ccgctagatgcagccttgttcgttccagc 348 ||||| |||||||||||||||| |||||| Sbjct: 242 ccgcttgatgcagccttgttcgatccagc 214
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 152 tactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcctgggt 207 ||||| ||||| | ||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 390 tactcttggattatctggggcttttcattgatcatctgagcaagctgagcctgggt 335 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 368 tcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttctt 420 ||||||||||| || | ||| || |||||||||||| |||| ||||||||||| Sbjct: 174 tcgatctcggcaccagcgcgacgagcagcgttgacgaccttctcgtccttctt 122
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 188 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 9784 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 9832
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 140 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 188 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 105703 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 105751
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Plus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 141458 gatcacctgtggcttctcattgat 141481
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 352 gatcacctgtggcttctcattgat 329
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 160 gatcacctgtggcttctcattgat 183 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY509992.1| Malus x domestica cultivar Royal Gala sucrose phosphate phosphatase mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 gggaaaggttctcagtgtcgt 290 ||||||||||||||||||||| Sbjct: 222 gggaaaggttctcagtgtcgt 202
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ttggtggtgtcgatctcggcg 379 ||||||||||||||||||||| Sbjct: 188873 ttggtggtgtcgatctcggcg 188853
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 cttggtggtgtcgatctcggcgccg 382 ||||||||||||| ||||||||||| Sbjct: 2350 cttggtggtgtcgctctcggcgccg 2374
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 cttggtggtgtcgatctcggcgccg 382 ||||||||||||| ||||||||||| Sbjct: 238677 cttggtggtgtcgctctcggcgccg 238701
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 482 ccaatcccagccatatctccctgat 506 |||| |||||||||||||||||||| Sbjct: 56969 ccaaacccagccatatctccctgat 56945
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 ctcggcgccggagcggcgggc 393 ||||||||||||||||||||| Sbjct: 874563 ctcggcgccggagcggcgggc 874543
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 cttggtggtgtcgatctcggcgccg 382 ||||||||||||| ||||||||||| Sbjct: 1865324 cttggtggtgtcgctctcggcgccg 1865300
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 cttggtggtgtcgatctcggcgccg 382 ||||||||||||| ||||||||||| Sbjct: 1983400 cttggtggtgtcgctctcggcgccg 1983376
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 cttggtggtgtcgatctcggcgccg 382 ||||||||||||| ||||||||||| Sbjct: 1072430 cttggtggtgtcgctctcggcgccg 1072454
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 482 ccaatcccagccatatctccctgat 506 |||| |||||||||||||||||||| Sbjct: 22605 ccaaacccagccatatctccctgat 22581
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ctcggcgccggagcggcggg 392 |||||||||||||||||||| Sbjct: 376 ctcggcgccggagcggcggg 395
>ref|XM_878913.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 3 (LOC532674), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gctcccagtcctgcctgagc 478 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_611824.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 1 (LOC532674), mRNA Length = 5390 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gctcccagtcctgcctgagc 478 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_866654.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 2 (LOC532674), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 gctcccagtcctgcctgagc 478 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence Length = 150332 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttgcataaggtttttcttc 247 |||||||||||||||||||| Sbjct: 126454 cttgcataaggtttttcttc 126435
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cgcaccactatcggctccca 465 |||||||||||||||||||| Sbjct: 1007050 cgcaccactatcggctccca 1007031
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 tggtggtgtcgatctcggcg 379 |||||||||||||||||||| Sbjct: 136957 tggtggtgtcgatctcggcg 136976
>gb|AC133540.2| Homo sapiens chromosome 16 clone LA16c-352F7, complete sequence Length = 40695 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttgcataaggtttttcttc 247 |||||||||||||||||||| Sbjct: 2479 cttgcataaggtttttcttc 2498
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 agccgcttggtgttgaggga 315 |||||||||||||||||||| Sbjct: 44273 agccgcttggtgttgaggga 44292
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cttgcataaggtttttcttc 247 |||||||||||||||||||| Sbjct: 8402 cttgcataaggtttttcttc 8383
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tcggcgccggagcggcgggcagcg 397 |||||||||||| ||||||||||| Sbjct: 7251 tcggcgccggaggggcgggcagcg 7228
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 agccgcttggtgttgaggga 315 |||||||||||||||||||| Sbjct: 121 agccgcttggtgttgaggga 140 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,740,265 Number of Sequences: 3902068 Number of extensions: 3740265 Number of successful extensions: 65568 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65173 Number of HSP's gapped (non-prelim): 387 length of query: 534 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 511 effective length of database: 17,143,297,704 effective search space: 8760225126744 effective search space used: 8760225126744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
