>ATC8_YEAST (Q12674) Probable phospholipid-transporting ATPase DNF3 (EC|
           3.6.3.1)
          Length = 1656

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -1

Query: 719 GVSELHKYELENQNNLIKQENKSVNGMKLPPRTVNGMDFYFDVSALGEKEQL 564
           G S LH  +L N  +  +    + N ++LPP+  NG     DV ++G++  L
Sbjct: 585 GSSWLHNVDLGNSEDNFEDNRDNTNSLRLPPKAHNGSS--IDVVSIGDQNVL 634

>YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 intergenic|
           region
          Length = 321

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
 Frame = -1

Query: 707 LHKYELENQNNLIKQENKSVNGMKLPPRTVNGMDFYFDVSAL----GEKEQLIMYQRIEN 540
           L++  L++  +L  Q N  V+  KLP        F+FD+         K QL+M Q + N
Sbjct: 21  LNQEHLQSLTHLGSQINFEVDPPKLPDPDPARKVFFFDIDNTLYRKSTKVQLLMQQSLSN 80

Query: 539 --SMERAYLLPSAFSTVQ--YVNGNLGTNGLYINKQVVNNDQIDQIAAETTEFISAEPLE 372
               E  +    A   ++  Y    L   GL      + N QID +    T    + PL+
Sbjct: 81  FFKYELGFDDDEAERLIESYYQEYGLSVKGL------IKNKQIDDVLQYNTFIDDSLPLQ 134

Query: 371 DVSSP 357
           D   P
Sbjct: 135 DYLKP 139

>DDB1_SCHPO (O13807) DNA damage-binding protein 1 (Damage-specific DNA-binding|
           protein 1)
          Length = 1072

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = -1

Query: 593 VSALGEKEQLIMYQRIENSMERAYLLPSAFSTV----QYVNGNLGTNGLYINKQVVNNDQ 426
           + ALGEK QL+ Y+      ++  + P + + +     YVN +LG N LY     ++  +
Sbjct: 632 IFALGEKPQLMYYES-----DKLVITPLSCTEMLNISSYVNPSLGVNMLYCTNSYISLAK 686

Query: 425 IDQIAAETTEFISAE 381
           + +I +   + +S +
Sbjct: 687 MSEIRSLNVQTVSVK 701

>YQ52_SCHPO (O74419) Hypothetical protein C162.02c in chromosome III|
          Length = 981

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -2

Query: 205 REMEYLIRIHLLLVCSSLEKNDEHARER 122
           R +EYL+++++ +VC   E +DE A+ER
Sbjct: 659 RFLEYLVKLNISVVCLVRESSDEAAKER 686

>MTD21_STRPN (P04043) Modification methylase DpnIIA (EC 2.1.1.72)|
           (Adenine-specific methyltransferase DpnIIA) (M.DpnIIA)
           (M.DpnII 1)
          Length = 284

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
 Frame = -1

Query: 695 ELENQNNLIKQENKSVNGMKLPPRTVNGMDFYFDVSALGEKEQLIMYQRIENSMERAYLL 516
           EL N    IK   + +  +    +  N  ++Y D+ +    E++ M   ++ +    Y+L
Sbjct: 66  ELINCYQQIKDNPQELIEILKVHQEYNSKEYYLDLRSADRDERIDMMSEVQRAARILYML 125

Query: 515 PSAFSTVQYVNGNLGTN---GLYINKQVVNNDQIDQIA 411
              F+ +  VN     N   G Y N ++V+ + I  I+
Sbjct: 126 RVNFNGLYRVNSKNQFNVPYGRYKNPKIVDEELISAIS 163

>SCRA_LIMPO (Q25390) Alpha-scruin|
          Length = 918

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
 Frame = -1

Query: 596 DVSALGEKEQLIMYQRIENSMERAYLLPSAFSTVQYVNGNLGTNGLY--INKQVVNNDQI 423
           + SA+ E E   MY R  N ++R  LLP A + +        T G Y  +     ++   
Sbjct: 353 EASAIAETE---MYDRKRNIIQRCSLLPVALTGIAVAAIPADTGGEYYEVPTSTPSSKAK 409

Query: 422 DQIAAETT--EFISAEPLEDVSSPANKSKMRWVRGRLVEAEE*TRRSKQSNS 273
            Q  ++ T  ++     + + +  A K + RW   R +E +  T+R +Q +S
Sbjct: 410 PQPGSKPTSVKYKKQPDIHERNEAAKKVQRRW--RRYIEQKSITKRMQQGDS 459


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,784,013
Number of Sequences: 219361
Number of extensions: 1848157
Number of successful extensions: 4303
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4302
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7422931207
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)