| Clone Name | rbaal30e07 |
|---|---|
| Clone Library Name | barley_pub |
>NOG1_ARATH (Q9C6I8) Probable nucleolar GTP-binding protein 1| Length = 671 Score = 310 bits (793), Expect = 2e-84 Identities = 158/191 (82%), Positives = 169/191 (88%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ Sbjct: 208 GHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 267 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 QAALFHSIKSLFMNKPLVIVCNKTDL P++ +SEED KL+ EMKSEAMKT SEE Sbjct: 268 QAALFHSIKSLFMNKPLVIVCNKTDLMPMENISEEDRKLIEEMKSEAMKT---AMGASEE 324 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 VLL MS LTDEGVM+VKNAACERLL+QRVE KMKSKKIND LNRFHVA+PKPRD+ +R Sbjct: 325 QVLLKMSTLTDEGVMSVKNAACERLLDQRVEAKMKSKKINDHLNRFHVAIPKPRDSIERL 384 Query: 38 TCIPQAVVKLK 6 CIPQ V++ K Sbjct: 385 PCIPQVVLEAK 395
>NOG1_MOUSE (Q99ME9) Nucleolar GTP-binding protein 1 (Chronic renal failure| gene protein) (GTP-binding protein NGB) Length = 633 Score = 200 bits (509), Expect = 2e-51 Identities = 97/188 (51%), Positives = 132/188 (70%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+QV+DTPGILD P EDRN IEM +ITALAHLRAAVL+ +D+S CG+ + + Sbjct: 207 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLKE 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF +I+ LF+NKPL++V NK D++ + LSEED K+ +++++E I Sbjct: 267 QLELFQNIRPLFINKPLIVVANKCDVKRIAELSEEDQKIFLDLQAEGFPVI--------- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 S LT+EGV+ VK AC+RLL RVE KMK K+N+ LNR H+A+P RD+++RP Sbjct: 318 ----ETSTLTEEGVIQVKTEACDRLLAHRVETKMKGNKVNEVLNRLHLAVPNKRDDKERP 373 Query: 38 TCIPQAVV 15 IP+ V+ Sbjct: 374 PFIPEGVI 381
>NOG1_HUMAN (Q9BZE4) Nucleolar GTP-binding protein 1 (Chronic renal failure| gene protein) (GTP-binding protein NGB) Length = 633 Score = 199 bits (505), Expect = 6e-51 Identities = 98/188 (52%), Positives = 131/188 (69%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+QV+DTPGILD P EDRN IEM +ITALAHLRAAVL+ +D+S CG+ + + Sbjct: 207 GHMDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLRE 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF +I+ LF+NKPL++V NK D++ + LSE+D K+ +++SE I Sbjct: 267 QLELFQNIRPLFINKPLIVVANKCDVKRIAELSEDDQKIFTDLQSEGFPVI--------- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 S LT+EGV+ VK AC+RLL RVE KMK K+N+ LNR H+A+P RD+++RP Sbjct: 318 ----ETSTLTEEGVIKVKTEACDRLLAHRVETKMKGNKVNEVLNRLHLAIPTRRDDKERP 373 Query: 38 TCIPQAVV 15 IP+ VV Sbjct: 374 PFIPEGVV 381
>NOG1_RAT (Q99P77) Nucleolar GTP-binding protein 1 (Chronic renal failure| gene protein) Length = 636 Score = 198 bits (503), Expect = 1e-50 Identities = 96/188 (51%), Positives = 132/188 (70%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+QV+DTPGILD P EDRN IEM +ITALAHLRAAVL+ +D+S CG+ + + Sbjct: 207 GHVDYKYLRWQVVDTPGILDHPLEDRNTIEMQAITALAHLRAAVLYVMDLSEQCGHGLKE 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF +I+ LF+NKPL++V +K +++ + LSEED K+ +++++E I Sbjct: 267 QLGLFQNIRPLFINKPLIVVASKCEVKRIAELSEEDQKIFLDLQAEGFPVI--------- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 S LT+EGV+ VK AC+RLL RVE KMK K+N+ LNR H+A+P RD+++RP Sbjct: 318 ----ETSTLTEEGVIQVKTEACDRLLAHRVETKMKGNKVNEVLNRLHLAVPNKRDDKERP 373 Query: 38 TCIPQAVV 15 IP+ VV Sbjct: 374 PFIPEGVV 381
>NOG1_DROME (Q9V411) Probable nucleolar GTP-binding protein 1| Length = 652 Score = 194 bits (493), Expect = 2e-49 Identities = 97/185 (52%), Positives = 130/185 (70%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+QVIDTPGILD P E+RN+IEM +ITALAHLRA VL+F+DIS CG+++ + Sbjct: 208 GHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAITALAHLRACVLYFMDISEQCGHSLEE 267 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF SIK LF NKPL++ NK D+ + L EE ++ +++ + K IP Sbjct: 268 QVKLFESIKPLFTNKPLILAINKIDILTPEDLPEERRAIITKLQED--KNIP-------- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 ++ MS + + GVM VK ACERLL RV+ KM++KK+++ LNR HVAMP PRD++ R Sbjct: 318 --VMLMSTVQETGVMEVKTEACERLLSYRVDQKMRTKKVDNILNRLHVAMPAPRDDKLRA 375 Query: 38 TCIPQ 24 CIP+ Sbjct: 376 PCIPE 380
>NOG1_YEAST (Q02892) Nucleolar GTP-binding protein 1| Length = 647 Score = 178 bits (452), Expect = 9e-45 Identities = 98/194 (50%), Positives = 132/194 (68%), Gaps = 2/194 (1%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+Q IDTPGILDRP E+ N IEM SI A+AHLR+ VL+F+D+S CG+TI Sbjct: 207 GHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEA 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LFHSIK LF NK +++V NKTD+ + L EE +L+ E++K +P Sbjct: 267 QVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDEERAQLL-----ESVKEVP-------- 313 Query: 218 GV-LLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSK-KINDCLNRFHVAMPKPRDNRD 45 GV ++T S +E VM V+N ACE+LL R+E K+KS+ +IN+ LN+ HVA P+ RD+ Sbjct: 314 GVEIMTSSCQLEENVMEVRNKACEKLLASRIENKLKSQSRINNVLNKIHVAQPQARDDVK 373 Query: 44 RPTCIPQAVVKLKQ 3 R IP++V LK+ Sbjct: 374 RTPFIPESVKNLKK 387
>NOG1_SCHPO (O94659) Probable nucleolar GTP-binding protein 1| Length = 642 Score = 176 bits (445), Expect = 6e-44 Identities = 93/187 (49%), Positives = 121/187 (64%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+QVIDTPGILD P E N IEM SITA+AHLR+AVL+F+D+S CGY++A Sbjct: 208 GHFDYKYLRWQVIDTPGILDHPLEQMNTIEMQSITAMAHLRSAVLYFMDLSEMCGYSVAA 267 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q L+HSIK LF NK ++V NK +D + ED+ + E ++TI G+ Sbjct: 268 QVKLYHSIKPLFANKVTILVLNK-----IDAMRPEDLD---QKNQELLQTIIDDGNVK-- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 ++ S + D GVM V+ ACE LL RVE K+K ++N+ LNR H+A P RD RP Sbjct: 318 --VVQTSCVQDIGVMDVRTTACEALLAARVEQKLKGSRVNNVLNRIHLAEPAARDEVARP 375 Query: 38 TCIPQAV 18 CIP +V Sbjct: 376 ACIPDSV 382
>NOG1_KLULA (Q6CM00) Nucleolar GTP-binding protein 1| Length = 643 Score = 171 bits (434), Expect = 1e-42 Identities = 93/195 (47%), Positives = 132/195 (67%), Gaps = 3/195 (1%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+Q IDTPGILDRP ++ N +EM SI A+AHLR+ V++F+D+S CG++I Sbjct: 207 GHFDYKYLRFQAIDTPGILDRPTDEMNNVEMQSIYAIAHLRSTVMYFMDLSEQCGFSIEA 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LFHSIK LF NK +++V NKTD+ + L EE KL+ + + +P Sbjct: 267 QVKLFHSIKPLFANKSVMVVINKTDIIKPEDLDEERKKLL-----DTVLEVP-------- 313 Query: 218 GV-LLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSK-KINDCLNRFHVAMPKPRDNR- 48 GV ++T S ++ VMAV+N ACE+LL R+E K+KS+ +I + LN+ HVA P+ RD+ Sbjct: 314 GVEIMTTSCHEEDNVMAVRNKACEKLLASRIENKLKSQARITNVLNKIHVAQPQKRDDGI 373 Query: 47 DRPTCIPQAVVKLKQ 3 DR IP+A+ K+K+ Sbjct: 374 DRTPYIPEAIAKMKK 388
>NOG1_ASHGO (Q74ZK6) Nucleolar GTP-binding protein 1| Length = 642 Score = 171 bits (432), Expect = 2e-42 Identities = 96/194 (49%), Positives = 130/194 (67%), Gaps = 2/194 (1%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+Q IDTPGILDRP E+ N IEM SI A+AHLR+ VL+F+D+S CG+TI Sbjct: 207 GHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSTVLYFMDLSEQCGFTIEA 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LFHSIK LF NK +++V NKTD+ + L EE + E +K+I P E Sbjct: 267 QVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDEE--------RQEMLKSIMD--FPGVE 316 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSK-KINDCLNRFHVAMPKPRDNR-D 45 ++T S + +E VMAV+N ACE+LL R+E K+KS+ +I + LN+ HVA P+ RD+ + Sbjct: 317 --IMTTSCINEENVMAVRNKACEKLLASRIENKLKSQTRITNVLNKIHVAHPQKRDDGVE 374 Query: 44 RPTCIPQAVVKLKQ 3 R IP+A +K+ Sbjct: 375 RTPYIPEAFKNVKK 388
>NOG1_CANGA (Q6FRV0) Nucleolar GTP-binding protein 1| Length = 645 Score = 167 bits (424), Expect = 2e-41 Identities = 91/194 (46%), Positives = 129/194 (66%), Gaps = 2/194 (1%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYLR+Q IDTPGILDRP E+ N IEM SI A+AHLR+ V++F+D+S CG+++ Sbjct: 207 GHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVMYFMDLSEQCGFSVEA 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LFHSIK LF NK +++V NKTD+ + L EE KL+ + + +P Sbjct: 267 QVKLFHSIKPLFANKSVMVVINKTDIIRPEDLDEERAKLL-----QTVTELP-------- 313 Query: 218 GV-LLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSK-KINDCLNRFHVAMPKPRDNRD 45 GV +++ S ++ VM V+N ACE+LL R+E K+KS+ +I + LN+ HVA P+ RD+ + Sbjct: 314 GVEIMSASCQLEDNVMNVRNKACEKLLASRIENKLKSQARITNVLNKIHVAKPQARDDVE 373 Query: 44 RPTCIPQAVVKLKQ 3 R IP+ KLK+ Sbjct: 374 RTPYIPEEFKKLKK 387
>NOG1_TRYBB (Q9U6A9) Nucleolar GTP-binding protein 1| Length = 655 Score = 167 bits (423), Expect = 2e-41 Identities = 89/192 (46%), Positives = 119/192 (61%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH D+KY +QVIDTPGILD E+RN+IEM +ITALAHLRA +LFF+D+S CG++IAQ Sbjct: 209 GHTDFKYASWQVIDTPGILDHSLEERNVIEMQAITALAHLRACILFFMDLSTQCGHSIAQ 268 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q +LF SI LF KP+++V NK+DL D ++ E+ LVM E Sbjct: 269 QVSLFKSIGPLFTGKPVIVVFNKSDLCTFDDITAEEQSLVMTAIEEC------------G 316 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRP 39 +T S LTD GV +K ACE LL R E K S + NR + A+P+ RDN +RP Sbjct: 317 AKWITTSTLTDAGVGDLKTLACETLLAHRSEQKEGSGRFQAIQNRLYCAVPQKRDNVERP 376 Query: 38 TCIPQAVVKLKQ 3 +P +V +++Q Sbjct: 377 AYVPPSVEEIRQ 388
>NOG1_CAEEL (O44411) Probable nucleolar GTP-binding protein 1| Length = 681 Score = 163 bits (412), Expect = 4e-40 Identities = 88/188 (46%), Positives = 121/188 (64%), Gaps = 4/188 (2%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DY++LR+QVIDTPGILD+P EDRN IEM ++TALAHL+A+VLF +D+S C +I + Sbjct: 209 GHLDYRFLRWQVIDTPGILDQPLEDRNTIEMQAVTALAHLKASVLFMMDVSEQCDRSIEE 268 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF SI+ LF NKP++I NK D++ L E L+ +++ E + Sbjct: 269 QLHLFESIRPLFANKPVLIGLNKVDIRHRSDLPPEKAALLDQLEKEGIP----------- 317 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKI---NDC-LNRFHVAMPKPRDN 51 ++ S LT EGVM +++ AC+ LL QRVE K+++KKI DC LNR VA P PRD Sbjct: 318 --IIETSTLTQEGVMGLRDRACDELLAQRVEAKIQAKKITNVEDCVLNRVFVAYPAPRDE 375 Query: 50 RDRPTCIP 27 + R +P Sbjct: 376 KVRAPFVP 383
>NOG1_ENCCU (Q8SVJ8) Nucleolar GTP-binding protein 1| Length = 528 Score = 138 bits (348), Expect = 1e-32 Identities = 74/172 (43%), Positives = 112/172 (65%) Frame = -1 Query: 578 GHADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQ 399 GH DYKYL++QVIDTPGILD+P E+RN IEM SITALAH++A VL+F+D+S +CGY++ + Sbjct: 207 GHFDYKYLQWQVIDTPGILDQPLENRNTIEMLSITALAHIKAVVLYFIDLSETCGYSVEE 266 Query: 398 QAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEE 219 Q LF+++ L ++ +VIV +K+D+ L G+ ED K +M E Sbjct: 267 QMDLFNTLNPL-LSSNMVIVLSKSDVLGLSGM--EDKKAIMSF--------------LEG 309 Query: 218 GVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPK 63 + MS +E + AVK AC+ LL++R E K+ S+++++ +NR + PK Sbjct: 310 KKYMEMSCEKEENIDAVKAMACDLLLDERFERKINSERLSEYINRITIVRPK 361
>Y1408_METJA (Q58803) Hypothetical protein MJ1408| Length = 350 Score = 77.4 bits (189), Expect = 3e-14 Identities = 41/89 (46%), Positives = 56/89 (62%) Frame = -1 Query: 548 QVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKS 369 Q++DTPG+LDRP +RN IE+ +I AL +L +LF +D S CGYTI +Q L IK Sbjct: 216 QMVDTPGLLDRPLYERNDIELQAILALNYLANLILFIIDASEFCGYTIEEQINLLKEIKD 275 Query: 368 LFMNKPLVIVCNKTDLQPLDGLSEEDMKL 282 LF P+V+ NK DL + + E + KL Sbjct: 276 LF-KAPIVVAINKIDLVDEERVKEIEEKL 303
>ENGA_BUCAP (O51881) GTP-binding protein engA| Length = 453 Score = 35.8 bits (81), Expect = 0.091 Identities = 45/187 (24%), Positives = 70/187 (37%) Frame = -1 Query: 566 YKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAAL 387 Y Y Y IDT G+ + + I + C I L + + L L I I++Q L Sbjct: 232 YNYKNYIFIDTAGMSKKKSKTNKIEKFCKIKTLQTIEKSHLTLLIIDAK--DQISKQDLL 289 Query: 386 FHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGVLL 207 S KPL+IV NK DL L + + ++K I Sbjct: 290 LSSFIEK-SGKPLIIVINKCDLLSLKEKKNLENLIKKQLKCNFFSKIH------------ 336 Query: 206 TMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRDRPTCIP 27 +SAL +EG + + + ++ K K + + H A+ K +P I Sbjct: 337 FISALNNEGTVELFKS-----IDTSYHTSQKKIKTSQVMKIMHKAVKK-----HQPPIIN 386 Query: 26 QAVVKLK 6 +KLK Sbjct: 387 GRRIKLK 393
>ENGA_CHLCV (Q821L7) GTP-binding protein engA| Length = 474 Score = 33.9 bits (76), Expect = 0.35 Identities = 29/75 (38%), Positives = 39/75 (52%) Frame = -1 Query: 548 QVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKS 369 QVIDT G+ D+ ED + + ALA A + L + CG T Q A L + Sbjct: 52 QVIDTGGV-DKDSED-HFQKHIYKQALAGANEADILLLVVDIRCGIT-EQDAELAKML-- 106 Query: 368 LFMNKPLVIVCNKTD 324 L +NKPL++V NK D Sbjct: 107 LPLNKPLILVANKAD 121
>HIS4_WOLSU (Q7M9W9) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 240 Score = 33.9 bits (76), Expect = 0.35 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%) Frame = -1 Query: 416 GYTIAQQAALFHSIKS-----LFMNKPL-VIVCNKTDLQP---LDGLSEEDMKLVMEMKS 264 GY A+ A +K+ LF PL I+C TD+ L+G++ E + + E Sbjct: 131 GYVAAEGWAETGKVKATELAALFREVPLDAIIC--TDISKDGTLEGINREFTQAIAEASG 188 Query: 263 EAMKTIPQGGDPSEEGVLLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLN 87 TI GG SEE + L A +GV+ K E R+++ K+++ CLN Sbjct: 189 HY--TIASGGLASEEEIPLLAQAKGVDGVIVGK-----AFYEGRIDLGTLYKRLSGCLN 240
>RHO_APLCA (P01122) RAS-like GTP-binding protein RHO| Length = 192 Score = 33.5 bits (75), Expect = 0.45 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 4/94 (4%) Frame = -1 Query: 359 NKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGV----LLTMSAL 192 N P+++V NK DL+ E + +M+MK E ++ P+ G E + L SA Sbjct: 109 NVPIILVGNKKDLRN----DESTKRELMKMKQEPVR--PEDGRAMAEKINAYSYLECSAK 162 Query: 191 TDEGVMAVKNAACERLLEQRVEIKMKSKKINDCL 90 T EGV V A R +++K KK C+ Sbjct: 163 TKEGVRDVFETA------TRAALQVKKKKKGGCV 190
>EFG1_BORBU (O30913) Elongation factor G 1 (EF-G 1)| Length = 693 Score = 33.5 bits (75), Expect = 0.45 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 4/170 (2%) Frame = -1 Query: 575 HADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISG--SCGYTIA 402 H ++K +IDTPG +D E +L L A+L ++G S T+ Sbjct: 68 HVEWKDFPINIIDTPGHVDFTIEVER--------SLRVLDGAILVLDSVAGVQSQSITVD 119 Query: 401 QQAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSE 222 +Q + + F+NK C+KT P + ++ ++ +++ S M+ IP G + Sbjct: 120 RQLKRYSVPRLAFVNK-----CDKTGANPYN--VKDQLRSKLDLNSVLMQ-IPIGLEDKH 171 Query: 221 EGV--LLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFH 78 GV L+ M A EG + E + E K K + + D L F+ Sbjct: 172 IGVIDLVLMKAYYFEGKDGTEIIEKEIPSDLLEEAKSKREIMLDTLADFN 221
>ENGA_FUSNN (Q8RGV7) GTP-binding protein engA| Length = 440 Score = 33.1 bits (74), Expect = 0.59 Identities = 26/99 (26%), Positives = 47/99 (47%) Frame = -1 Query: 569 DYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAA 390 +YK +Y +IDT GI + + ++ + AL ++ A + L + G T + Sbjct: 220 EYKDNKYMIIDTAGIRRKSKVEESLEYYSVLRALKAIKRADVCILMLDAKEGLTEQDKRI 279 Query: 389 LFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVME 273 + + L KP++IV NK DL ++ + MK + E Sbjct: 280 AGIAAEEL---KPIIIVMNKWDL--VENKNNATMKKIKE 313
>EFG1_BORGA (Q660Y4) Elongation factor G 1 (EF-G 1)| Length = 693 Score = 33.1 bits (74), Expect = 0.59 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 4/170 (2%) Frame = -1 Query: 575 HADYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISG--SCGYTIA 402 H ++K +IDTPG +D E +L L A+L ++G S T+ Sbjct: 68 HVEWKDFPINIIDTPGHVDFTIEVER--------SLRVLDGAILVLDSVAGVQSQSITVD 119 Query: 401 QQAALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSE 222 +Q + + F+NK C+KT P + + ++ +++ S M+ IP G + Sbjct: 120 RQLKRYSVPRLAFVNK-----CDKTGANPYN--VRDQLRSKLDLNSVLMQ-IPIGLEDKH 171 Query: 221 EGV--LLTMSALTDEGVMAVKNAACERLLEQRVEIKMKSKKINDCLNRFH 78 GV L+ M A EG + E + E K K + + D L F+ Sbjct: 172 IGVIDLVLMKAYYFEGKDGTEIIEKEIPSDLLGEAKKKREIMLDALADFN 221
>EFG_RHIME (Q92QH2) Elongation factor G (EF-G)| Length = 699 Score = 33.1 bits (74), Expect = 0.59 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 3/129 (2%) Frame = -1 Query: 569 DYKYLRYQVIDTPGILDRPFE-DRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQA 393 D K R+ +IDTPG +D E +R++ + AL A V + T+ +QA Sbjct: 76 DGKTRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTE-------TVWRQA 128 Query: 392 ALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGV 213 +H P +I CNK D D +M + + + +P G + +GV Sbjct: 129 EKYH--------VPRMIFCNKMDKTGADFYRSVEMIKMRLGATAVVMQLPIGAESDFKGV 180 Query: 212 --LLTMSAL 192 L+ M+AL Sbjct: 181 IDLIEMNAL 189
>Y2883_SHEON (P59352) UPF0229 protein SO2883| Length = 422 Score = 33.1 bits (74), Expect = 0.59 Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 10/135 (7%) Frame = -1 Query: 452 AVLF-FLDISGSCGYTIAQQAALFHSIKSLFM-----NKPLVIVCNKTDLQPLDG----L 303 AV+F +D+SGS A F+ + LF+ N +V + + T + +D Sbjct: 248 AVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHTQAKEVDEHEFFY 307 Query: 302 SEEDMKLVMEMKSEAMKTIPQGGDPSEEGVLLTMSALTDEGVMAVKNAACERLLEQRVEI 123 S+E ++ + M I Q P++E + A +D A + C++LLEQ++ Sbjct: 308 SQETGGTIVSSALKLMHEIQQARYPADEWNIYAAQA-SDGDNWADDSPTCKQLLEQKILP 366 Query: 122 KMKSKKINDCLNRFH 78 ++ + NR H Sbjct: 367 LVRYFSYIEITNRAH 381
>EFG_AGRTU (P70782) Elongation factor G (EF-G)| Length = 699 Score = 32.3 bits (72), Expect = 1.0 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 3/129 (2%) Frame = -1 Query: 569 DYKYLRYQVIDTPGILDRPFE-DRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQA 393 D K R+ +IDTPG +D E +R++ + AL A V + T+ +QA Sbjct: 76 DGKMRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTE-------TVWRQA 128 Query: 392 ALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGV 213 + N P +I CNK D D +M + + +P G + +GV Sbjct: 129 EKY--------NVPRMIFCNKMDKTGADFYRSVEMIKTRLGATAVVMQLPIGAETEFKGV 180 Query: 212 --LLTMSAL 192 L+ M+AL Sbjct: 181 IDLIEMNAL 189
>EFG_AGRT5 (Q8UE15) Elongation factor G (EF-G)| Length = 699 Score = 32.3 bits (72), Expect = 1.0 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 3/129 (2%) Frame = -1 Query: 569 DYKYLRYQVIDTPGILDRPFE-DRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQA 393 D K R+ +IDTPG +D E +R++ + AL A V + T+ +QA Sbjct: 76 DGKMRRFNIIDTPGHVDFTIEVERSLRVLDGAIALLDANAGVEPQTE-------TVWRQA 128 Query: 392 ALFHSIKSLFMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGV 213 + N P +I CNK D D +M + + +P G + +GV Sbjct: 129 EKY--------NVPRMIFCNKMDKTGADFYRSVEMIKTRLGATAVVMQLPIGAETEFKGV 180 Query: 212 --LLTMSAL 192 L+ M+AL Sbjct: 181 IDLIEMNAL 189
>DDX24_HUMAN (Q9GZR7) ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box| protein 24) Length = 859 Score = 31.6 bits (70), Expect = 1.7 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Frame = +3 Query: 309 IKRLQISLVAHNDQRLIHEQGFYTVEECSLLSNSVPTRTRDVQEEQH---------SSPQ 461 I L + H QRL + + F +E+C LL+ V R D+ + QH S Sbjct: 612 IMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIY 671 Query: 462 VGKSGDTA 485 V +SG TA Sbjct: 672 VHRSGRTA 679
>SELB_MOOTH (Q46455) Selenocysteine-specific elongation factor (SelB| translation factor) Length = 634 Score = 31.2 bits (69), Expect = 2.2 Identities = 36/122 (29%), Positives = 55/122 (45%) Frame = -1 Query: 530 GILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFMNKP 351 G++D P +R I +M LA + L L ++ G + Q +I L K Sbjct: 57 GLVDVPGHERFIRQM-----LAGVGGMDLVMLVVAADEG--VMPQTREHLAIIDLLQIKK 109 Query: 350 LVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGVLLTMSALTDEGVMA 171 +IV K DL D L +LV E +A+K G E+ L+ +SALT EG+ Sbjct: 110 GIIVITKIDLVEADWL-----ELVREEVRQAVK-----GTVLEDAPLVEVSALTGEGIAE 159 Query: 170 VK 165 ++ Sbjct: 160 LR 161
>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)| Length = 501 Score = 30.0 bits (66), Expect = 5.0 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -1 Query: 419 CGYTIAQQAALFHSIKSLFMNKPL-VIVCNKT 327 CG Q+A LFH +KS N+P + CNK+ Sbjct: 358 CGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKS 389
>ULP2_SCHPO (O13769) Ubiquitin-like-specific protease 2 (EC 3.4.22.-)| Length = 652 Score = 30.0 bits (66), Expect = 5.0 Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Frame = -1 Query: 350 LVIVCNKTDLQPLDGLSEEDMKLVM-EMKSEAMKTIPQGGDPSEEGVLLTMSALTDEGVM 174 L I+CN L P+D EE ++VM ++ + Q S +L +L + Sbjct: 457 LAIICNIDRLMPVDTKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKG 516 Query: 173 AVKNAACERLLEQRVEIKMKSKKINDCLNRFHVAMPKPRDNRD 45 A+ N E LLE+ E K K D + FH +P+ + D Sbjct: 517 AL-NYLREYLLEEAFERKNVHLKSTD-IRGFHAKVPQQSNFSD 557
>DDX24_MOUSE (Q9ESV0) ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box| protein 24) Length = 857 Score = 29.6 bits (65), Expect = 6.5 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +3 Query: 318 LQISLVAHNDQRLIHEQGFYTVEECSLLSNSVPTRTRDVQEEQH 449 L + H QRL + + F +++C LL+ V R D+ + QH Sbjct: 615 LTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQH 658
>LEPA_PROMP (Q7V2Q1) GTP-binding protein lepA| Length = 602 Score = 29.6 bits (65), Expect = 6.5 Identities = 35/148 (23%), Positives = 60/148 (40%) Frame = -1 Query: 545 VIDTPGILDRPFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSL 366 +IDTPG +D +E ++ C L + S G A ++ ++++ Sbjct: 80 LIDTPGHVDFSYEVSRSLQACEGALLV-----------VDASQGVEAQTLANVYLALEN- 127 Query: 365 FMNKPLVIVCNKTDLQPLDGLSEEDMKLVMEMKSEAMKTIPQGGDPSEEGVLLTMSALTD 186 N ++ V NK DL D ++K E + I G D S + SA T Sbjct: 128 --NLEIIPVLNKVDLPGADA---------EKIKQEIEEII--GLDTSNA---INCSAKTG 171 Query: 185 EGVMAVKNAACERLLEQRVEIKMKSKKI 102 EG+ + A R+ + E+K +K + Sbjct: 172 EGIEDILEAVVSRIPHPQNEVKSLTKAL 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,400,753 Number of Sequences: 219361 Number of extensions: 1366776 Number of successful extensions: 4215 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4196 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)