>ref|XM_468164.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2888

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 539  tttacttcacgttcattgctgcggccattttcctcaacctttgagatatttcagtgaagg 598
            |||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 2362 tttacttcacattcattgctgcagccatcttcctcaacctttgagatatttctgtgaagg 2303

                                                                        
Query: 599  atggcctttgagctggttcaccagcccaactaccttccatcaatgatttccattcagggt 658
            |||| || |  ||||||||||  |||||||    |||||||| ||||||||||||||| |
Sbjct: 2302 atggtctatctgctggttcactggcccaacagttttccatcagtgatttccattcaggat 2243

                                     
Query: 659  cgcaccaggaagggatctgaggacg 683
            | ||||| || ||||||||||||||
Sbjct: 2242 cacaccatgaggggatctgaggacg 2218



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 73/82 (89%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    aaatcttattcgtggactatgtacaatctgaataaggatatctcttgttcgagtttgttc 63
            ||||||||||||||  |||| ||||||||||||||||||||||| |||||||| |||| |
Sbjct: 2841 aaatcttattcgtgagctatttacaatctgaataaggatatctc-tgttcgag-ttgtcc 2784

                                  
Query: 64   catcttttctcaggacacaatt 85
            | ||||| || |||||||||||
Sbjct: 2783 cctctttccttaggacacaatt 2762

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Minus

                                                                            
Query: 539      tttacttcacgttcattgctgcggccattttcctcaacctttgagatatttcagtgaagg 598
                |||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 33410452 tttacttcacattcattgctgcagccatcttcctcaacctttgagatatttctgtgaagg 33410393

                                                                            
Query: 599      atggcctttgagctggttcaccagcccaactaccttccatcaatgatttccattcagggt 658
                |||| || |  ||||||||||  |||||||    |||||||| ||||||||||||||| |
Sbjct: 33410392 atggtctatctgctggttcactggcccaacagttttccatcagtgatttccattcaggat 33410333

                                         
Query: 659      cgcaccaggaagggatctgaggacg 683
                | ||||| || ||||||||||||||
Sbjct: 33410332 cacaccatgaggggatctgaggacg 33410308



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 73/82 (89%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                            
Query: 4        aaatcttattcgtggactatgtacaatctgaataaggatatctcttgttcgagtttgttc 63
                ||||||||||||||  |||| ||||||||||||||||||||||| |||||||| |||| |
Sbjct: 33411021 aaatcttattcgtgagctatttacaatctgaataaggatatctc-tgttcgag-ttgtcc 33410964

                                      
Query: 64       catcttttctcaggacacaatt 85
                | ||||| || |||||||||||
Sbjct: 33410963 cctctttccttaggacacaatt 33410942

>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Minus

                                                                         
Query: 539   tttacttcacgttcattgctgcggccattttcctcaacctttgagatatttcagtgaagg 598
             |||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 41071 tttacttcacattcattgctgcagccatcttcctcaacctttgagatatttctgtgaagg 41012

                                                                         
Query: 599   atggcctttgagctggttcaccagcccaactaccttccatcaatgatttccattcagggt 658
             |||| || |  ||||||||||  |||||||    |||||||| ||||||||||||||| |
Sbjct: 41011 atggtctatctgctggttcactggcccaacagttttccatcagtgatttccattcaggat 40952

                                      
Query: 659   cgcaccaggaagggatctgaggacg 683
             | ||||| || ||||||||||||||
Sbjct: 40951 cacaccatgaggggatctgaggacg 40927



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 73/82 (89%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                         
Query: 4     aaatcttattcgtggactatgtacaatctgaataaggatatctcttgttcgagtttgttc 63
             ||||||||||||||  |||| ||||||||||||||||||||||| |||||||| |||| |
Sbjct: 41640 aaatcttattcgtgagctatttacaatctgaataaggatatctc-tgttcgag-ttgtcc 41583

                                   
Query: 64    catcttttctcaggacacaatt 85
             | ||||| || |||||||||||
Sbjct: 41582 cctctttccttaggacacaatt 41561

>dbj|AK067937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122E21, full
            insert sequence
          Length = 2888

 Score =  137 bits (69), Expect = 5e-29
 Identities = 126/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 539  tttacttcacgttcattgctgcggccattttcctcaacctttgagatatttcagtgaagg 598
            |||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct: 2362 tttacttcacattcattgctgcagccatcttcctcaacctttgagatatttctgtgaagg 2303

                                                                        
Query: 599  atggcctttgagctggttcaccagcccaactaccttccatcaatgatttccattcagggt 658
            |||| || |  ||||||||||  |||||||    |||||||| ||||||||||||||| |
Sbjct: 2302 atggtctatctgctggttcactggcccaacagttttccatcagtgatttccattcaggat 2243

                                     
Query: 659  cgcaccaggaagggatctgaggacg 683
            | ||||| || ||||||||||||||
Sbjct: 2242 cacaccatgaggggatctgaggacg 2218



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 73/82 (89%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    aaatcttattcgtggactatgtacaatctgaataaggatatctcttgttcgagtttgttc 63
            ||||||||||||||  |||| ||||||||||||||||||||||| |||||||| |||| |
Sbjct: 2841 aaatcttattcgtgagctatttacaatctgaataaggatatctc-tgttcgag-ttgtcc 2784

                                  
Query: 64   catcttttctcaggacacaatt 85
            | ||||| || |||||||||||
Sbjct: 2783 cctctttccttaggacacaatt 2762

>ref|XM_468165.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 570

 Score =  135 bits (68), Expect = 2e-28
 Identities = 125/144 (86%)
 Strand = Plus / Minus

                                                                       
Query: 540 ttacttcacgttcattgctgcggccattttcctcaacctttgagatatttcagtgaagga 599
           ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 570 ttacttcacattcattgctgcagccatcttcctcaacctttgagatatttctgtgaagga 511

                                                                       
Query: 600 tggcctttgagctggttcaccagcccaactaccttccatcaatgatttccattcagggtc 659
           ||| || |  ||||||||||  |||||||    |||||||| ||||||||||||||| ||
Sbjct: 510 tggtctatctgctggttcactggcccaacagttttccatcagtgatttccattcaggatc 451

                                   
Query: 660 gcaccaggaagggatctgaggacg 683
            ||||| || ||||||||||||||
Sbjct: 450 acaccatgaggggatctgaggacg 427

>emb|AL391666.5| Human DNA sequence from clone RP13-130D24 on chromosome Xq21.31-22.1
            Contains a karyopherin (importin) beta 1 (KPNB1)
            pseudogene, complete sequence
          Length = 147080

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   agtttgttccatcttttctca 75
            |||||||||||||||||||||
Sbjct: 4897 agtttgttccatcttttctca 4877

>gb|AC068308.12| Homo sapiens 3 BAC RP11-275H4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154495

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 399   gccttcatgaaatctcatttgaata 423
             |||||||| ||||||||||||||||
Sbjct: 64277 gccttcattaaatctcatttgaata 64301

>dbj|AB168483.1| Macaca fascicularis testis cDNA clone: QtsA-12511, similar to human
           outer dense fiber of sperm tails 1 (ODF1), mRNA, RefSeq:
           NM_024410.2
          Length = 1584

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 190 aacccaacagttcccatcatg 210
           |||||||||||||||||||||
Sbjct: 605 aacccaacagttcccatcatg 585

>gb|AC130103.4| Rattus norvegicus  BAC CH230-41L20 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 224716

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   aaaatttatttacattacaaa 191
             |||||||||||||||||||||
Sbjct: 73057 aaaatttatttacattacaaa 73077

>ref|XM_638745.1| Dictyostelium discoideum hypothetical protein (DDB0167398), partial
           mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 500 ttctttacatgcctcttctc 519
           ||||||||||||||||||||
Sbjct: 924 ttctttacatgcctcttctc 943

>ref|NM_200843.1| Danio rerio zgc:65944 (zgc:65944), mRNA
          Length = 3274

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  tatatcgtactgaaggcaaa 250
            ||||||||||||||||||||
Sbjct: 1015 tatatcgtactgaaggcaaa 1034

>gb|BC061953.1| Danio rerio zgc:65944, mRNA (cDNA clone MGC:65944 IMAGE:6790875),
            complete cds
          Length = 3274

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  tatatcgtactgaaggcaaa 250
            ||||||||||||||||||||
Sbjct: 1015 tatatcgtactgaaggcaaa 1034

>gb|AC147896.2| Xenopus tropicalis clone CH216-45L11, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   gaaatctcatttgaataaac 426
             ||||||||||||||||||||
Sbjct: 56111 gaaatctcatttgaataaac 56092

>gb|AC165965.3| Mus musculus BAC clone RP23-307L24 from chromosome 6, complete sequence
          Length = 209230

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 401    cttcatgaaatctcatttgaataa 424
              |||||||| |||||||||||||||
Sbjct: 155764 cttcatgagatctcatttgaataa 155741

>ref|XM_752949.1| Ustilago maydis 521 hypothetical protein (UM01895.1) partial mRNA
          Length = 756

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 430 gacgctgccaagacacttgcaaaa 453
           ||||||||||||||||||| ||||
Sbjct: 283 gacgctgccaagacacttgaaaaa 260

>emb|CR932610.1|CNS0KYC5 Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 402 ttcatgaaatctcatttgaa 421
           ||||||||||||||||||||
Sbjct: 602 ttcatgaaatctcatttgaa 583

>gb|AC130721.3| Mus musculus BAC clone RP24-333B3 from chromosome 6, complete sequence
          Length = 149502

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 401    cttcatgaaatctcatttgaataa 424
              |||||||| |||||||||||||||
Sbjct: 123291 cttcatgagatctcatttgaataa 123314

>gb|AC125373.4| Mus musculus BAC clone RP23-379A13 from chromosome 3, complete sequence
          Length = 190760

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    ctgccaagacacttgcaaaa 453
              ||||||||||||||||||||
Sbjct: 133522 ctgccaagacacttgcaaaa 133503

>gb|AC133210.3| Mus musculus chromosome UNK clone RP23-27L12, complete sequence
          Length = 210702

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   aaaatttatttacattacaa 190
             ||||||||||||||||||||
Sbjct: 84673 aaaatttatttacattacaa 84692

>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence
          Length = 135726

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 364   agattgtccgggatgagtttcacc 387
             |||||||| |||||||||||||||
Sbjct: 79339 agattgtcagggatgagtttcacc 79362



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 364   agattgtccgggatgagtttcacc 387
             |||||||| |||||||||||||||
Sbjct: 66880 agattgtcagggatgagtttcacc 66903

>emb|AL451080.11| Human DNA sequence from clone RP11-323B13 on chromosome 6 Contains the
             3' end of a novel gene (FLJ20342), complete sequence
          Length = 56725

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 540   ttacttcacgttcattgctg 559
             ||||||||||||||||||||
Sbjct: 27749 ttacttcacgttcattgctg 27768

>gb|AC158143.6| Mus musculus chromosome 5, clone RP23-409I5, complete sequence
          Length = 191873

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aaacccaacagttcccatca 208
             ||||||||||||||||||||
Sbjct: 94477 aaacccaacagttcccatca 94496

>gb|AC009370.7| Drosophila melanogaster 3L BAC RP98-35F4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174919

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   agagaaaccacccactcaca 349
             ||||||||||||||||||||
Sbjct: 21091 agagaaaccacccactcaca 21110

>gb|AC009368.8| Drosophila melanogaster 3L BAC RP98-4F7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 158816

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    agagaaaccacccactcaca 349
              ||||||||||||||||||||
Sbjct: 141758 agagaaaccacccactcaca 141777

>gb|AC098648.2| Homo sapiens chromosome 3 clone RP11-240N7, complete sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    acaggaaatggagaagtcat 292
              ||||||||||||||||||||
Sbjct: 135964 acaggaaatggagaagtcat 135983

>gb|AC092051.2| Homo sapiens chromosome 3 clone RP11-286G5, complete sequence
          Length = 183591

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    acaggaaatggagaagtcat 292
              ||||||||||||||||||||
Sbjct: 154893 acaggaaatggagaagtcat 154874

>ref|XM_690673.1| PREDICTED: Danio rerio similar to RAB guanine nucleotide exchange
            factor (GEF) 1 (LOC567380), mRNA
          Length = 2430

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  tatatcgtactgaaggcaaa 250
            ||||||||||||||||||||
Sbjct: 1021 tatatcgtactgaaggcaaa 1040

>emb|BX548241.6| Zebrafish DNA sequence from clone DKEY-23F5 in linkage group 10,
            complete sequence
          Length = 92780

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 231  tatatcgtactgaaggcaaa 250
            ||||||||||||||||||||
Sbjct: 1738 tatatcgtactgaaggcaaa 1757

>gb|AC116305.2| Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4,
             complete sequence
          Length = 413138

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   ttctttacatgcctcttctc 519
             ||||||||||||||||||||
Sbjct: 87467 ttctttacatgcctcttctc 87448

>gb|AF098333.1|AF098333 Aenetus virescens cytochrome oxidase subunit I and cytochrome
           oxidase subunit II genes, partial cds; mitochondrial
           genes for mitochondrial products
          Length = 527

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 aaatttatttacattacaaa 191
           ||||||||||||||||||||
Sbjct: 81  aaatttatttacattacaaa 100

>emb|AL824703.12| Mouse DNA sequence from clone RP23-317M2 on chromosome 4, complete
             sequence
          Length = 80922

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aaatttatttacattacaaa 191
             ||||||||||||||||||||
Sbjct: 77307 aaatttatttacattacaaa 77288

>emb|AJ009905.1|CCO9905 Coturnix coturnix neuroretina-specific pax6 gene enhancer region
          Length = 277

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 ttacattacaaacccaacag 199
           ||||||||||||||||||||
Sbjct: 51  ttacattacaaacccaacag 32

>gb|AE003520.4| Drosophila melanogaster chromosome 3L, section 65 of 83 of the complete
             sequence
          Length = 275124

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   agagaaaccacccactcaca 349
             ||||||||||||||||||||
Sbjct: 64526 agagaaaccacccactcaca 64545

>emb|AL935293.11| Zebrafish DNA sequence from clone CH211-251D10 in linkage group 10,
             complete sequence
          Length = 188908

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tatatcgtactgaaggcaaa 250
             ||||||||||||||||||||
Sbjct: 72174 tatatcgtactgaaggcaaa 72193

>emb|AL627228.31| Mouse DNA sequence from clone RP23-137L22 on chromosome 4, complete
              sequence
          Length = 193813

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 329    gagagaaaccacccactcacatcaaaat 356
              |||| |||||||||| ||||||||||||
Sbjct: 174218 gagataaaccacccattcacatcaaaat 174191

>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete
             sequence
          Length = 230634

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 645   tttccattcagggtcgcaccagga 668
             ||||||||||||||| ||||||||
Sbjct: 67899 tttccattcagggtctcaccagga 67876

>emb|AL583884.20| Mouse DNA sequence from clone RP23-324B16 on chromosome 15, complete
              sequence
          Length = 202342

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    atttatttacattacaaacc 193
              ||||||||||||||||||||
Sbjct: 175264 atttatttacattacaaacc 175245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,897,796
Number of Sequences: 3902068
Number of extensions: 6897796
Number of successful extensions: 139935
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139803
Number of HSP's gapped (non-prelim): 127
length of query: 686
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 663
effective length of database: 17,143,297,704
effective search space: 11366006377752
effective search space used: 11366006377752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)